Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110679765

Identifier: 110679765

GI number: 110679765

Start: 2415526

End: 2415810

Strand: Direct

Name: 110679765

Synonym: RD1_2528

Alternate gene names: NA

Gene position: 2415526-2415810 (Clockwise)

Preceding gene: 110679761

Following gene: 110679766

Centisome position: 58.44

GC content: 56.14

Gene sequence:

>285_bases
ATGTCCCATACGCAAGAGTCCGCCGAAGTGGTTGCGCTGCAGGTTTTGGCATGGCTGGCAGGTGATGAGGAATTATTACC
GGTATTTCAGGGCTCTAGCGGCGCCTCAACCGAGGACCTGCGCGCAGGGGCGCAGGATGCGGTGTTCCTGGGGTCGGTTC
TGGATTTTATCATGATGGATGATGCCTGGGTGGTCAGGTGCTGTGATGATCTGAAACTTGAGTACACAAGCCTCATGCGT
GCGCGTCAACAATTGCCGGGTGGTGCGCAGGTGAATTGGACATGA

Upstream 100 bases:

>100_bases
ACGCTGATTGCGTCCTTTCGAAGGGAGGTTCGGGTGGCTGACATTGATCGCAGATTGGTTAACAAACCGTTTCAAAGAGA
TTTAAAATTTGAGGTGTAGC

Downstream 100 bases:

>100_bases
CATCGCTGAAAGCCGTTATTTTTGACAAGGATGGCACCCTTTTCGACTTTTCCACGACGTGGGAGGCCTGGGCCGCCGCA
TTCCTGAGGCGAATCGCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MSHTQESAEVVALQVLAWLAGDEELLPVFQGSSGASTEDLRAGAQDAVFLGSVLDFIMMDDAWVVRCCDDLKLEYTSLMR
ARQQLPGGAQVNWT

Sequences:

>Translated_94_residues
MSHTQESAEVVALQVLAWLAGDEELLPVFQGSSGASTEDLRAGAQDAVFLGSVLDFIMMDDAWVVRCCDDLKLEYTSLMR
ARQQLPGGAQVNWT
>Mature_93_residues
SHTQESAEVVALQVLAWLAGDEELLPVFQGSSGASTEDLRAGAQDAVFLGSVLDFIMMDDAWVVRCCDDLKLEYTSLMRA
RQQLPGGAQVNWT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10262; Mature: 10130

Theoretical pI: Translated: 3.90; Mature: 3.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHTQESAEVVALQVLAWLAGDEELLPVFQGSSGASTEDLRAGAQDAVFLGSVLDFIMMD
CCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHCC
DAWVVRCCDDLKLEYTSLMRARQQLPGGAQVNWT
CCCEEEHHCCCCHHHHHHHHHHHHCCCCCEECCC
>Mature Secondary Structure 
SHTQESAEVVALQVLAWLAGDEELLPVFQGSSGASTEDLRAGAQDAVFLGSVLDFIMMD
CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHCC
DAWVVRCCDDLKLEYTSLMRARQQLPGGAQVNWT
CCCEEEHHCCCCHHHHHHHHHHHHCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA