Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is yceI [C]

Identifier: 110679755

GI number: 110679755

Start: 2405805

End: 2406401

Strand: Reverse

Name: yceI [C]

Synonym: RD1_2518

Alternate gene names: 110679755

Gene position: 2406401-2405805 (Counterclockwise)

Preceding gene: 110679756

Following gene: 110679754

Centisome position: 58.22

GC content: 63.15

Gene sequence:

>597_bases
ATGACCTCACCCCTCACCCGACGCATGTTCATCGCGGCTGCGCTCAGCGCTTTGGCGGGTGCGGGGCACGCCCGCCCCCA
AAGCTATGAGTTGGTTGCCGAAGGTTCCCGCGTTGCCTTTATCTTTACCTCGAACGGGGCAAGCCAATCAGGCACCGTCC
CTGTGCAAAGGGCTGACATTCTCGTTGATCGGCAGAACCTCTCCAATTCGACGGCACAGGTGACAGCCGATGTGCGCAAG
GTCCGATCCGGCCTCCTGCTGATCACGCAGGCGATAAAAAGCCCCGAACTGCTGGATGCCGCCACCCATCCCATGGTGCG
CTTTACATCGACCCGCATTCGACTGGGGGCCAACGGTCGCATTTCCGAAGGGGCGCAGATCGAAGGTCAGCTGACGCTGC
GCGGTGTCACGCGCCCCATCACCCTTGATGCCGTGCTGAGCCGCCCGGCCGGCACCGCCCCGGATGATCTGTCAGTGCTG
TTCATTCAACTGAACGGAGAACTCAGCCGCGCCGCCTATGGGGCGAGCGGATACGCGGGTCTGGCAGACGATACCGTCCT
GTTGGACATCCGCGCAGAAATCCGCGCCCGGGCCTGA

Upstream 100 bases:

>100_bases
CAAGGACACAAACGCGCATAAACTGTCTATCAAGAGGTCGTGAGGCCCGGGAAAACGGCCCGAACCGGCCTATGTTATCC
TGCCAAAGGAGCTGTGCAGC

Downstream 100 bases:

>100_bases
AAACGACGCCCTTTGTCGAATAAGCGCAAGGCCCTATCCAACAAGCGCGTAGGGTGCGTCTTACCATGCGACTGCTCATT
TCCTTTGCTGCTCTGTTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: YceI Like Family Protein; YceI Family Protein

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MTSPLTRRMFIAAALSALAGAGHARPQSYELVAEGSRVAFIFTSNGASQSGTVPVQRADILVDRQNLSNSTAQVTADVRK
VRSGLLLITQAIKSPELLDAATHPMVRFTSTRIRLGANGRISEGAQIEGQLTLRGVTRPITLDAVLSRPAGTAPDDLSVL
FIQLNGELSRAAYGASGYAGLADDTVLLDIRAEIRARA

Sequences:

>Translated_198_residues
MTSPLTRRMFIAAALSALAGAGHARPQSYELVAEGSRVAFIFTSNGASQSGTVPVQRADILVDRQNLSNSTAQVTADVRK
VRSGLLLITQAIKSPELLDAATHPMVRFTSTRIRLGANGRISEGAQIEGQLTLRGVTRPITLDAVLSRPAGTAPDDLSVL
FIQLNGELSRAAYGASGYAGLADDTVLLDIRAEIRARA
>Mature_197_residues
TSPLTRRMFIAAALSALAGAGHARPQSYELVAEGSRVAFIFTSNGASQSGTVPVQRADILVDRQNLSNSTAQVTADVRKV
RSGLLLITQAIKSPELLDAATHPMVRFTSTRIRLGANGRISEGAQIEGQLTLRGVTRPITLDAVLSRPAGTAPDDLSVLF
IQLNGELSRAAYGASGYAGLADDTVLLDIRAEIRARA

Specific function: Unknown

COG id: COG2353

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20911; Mature: 20780

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPLTRRMFIAAALSALAGAGHARPQSYELVAEGSRVAFIFTSNGASQSGTVPVQRADI
CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCEEHHEE
LVDRQNLSNSTAQVTADVRKVRSGLLLITQAIKSPELLDAATHPMVRFTSTRIRLGANGR
EEECCCCCCCHHHHHHHHHHHHHHHHEEEHHHCCCHHHHHHCCCEEEEEEEEEEECCCCC
ISEGAQIEGQLTLRGVTRPITLDAVLSRPAGTAPDDLSVLFIQLNGELSRAAYGASGYAG
CCCCCEEEEEEEEEECCCCEEEHHHHCCCCCCCCCCEEEEEEEECCCCCHHCCCCCCCCC
LADDTVLLDIRAEIRARA
CCCCEEEEEEEEEEEECC
>Mature Secondary Structure 
TSPLTRRMFIAAALSALAGAGHARPQSYELVAEGSRVAFIFTSNGASQSGTVPVQRADI
CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCEEHHEE
LVDRQNLSNSTAQVTADVRKVRSGLLLITQAIKSPELLDAATHPMVRFTSTRIRLGANGR
EEECCCCCCCHHHHHHHHHHHHHHHHEEEHHHCCCHHHHHHCCCEEEEEEEEEEECCCCC
ISEGAQIEGQLTLRGVTRPITLDAVLSRPAGTAPDDLSVLFIQLNGELSRAAYGASGYAG
CCCCCEEEEEEEEEECCCCEEEHHHHCCCCCCCCCCEEEEEEEECCCCCHHCCCCCCCCC
LADDTVLLDIRAEIRARA
CCCCEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA