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The map label for this gene is mcpA [H]

Identifier: 110679750

GI number: 110679750

Start: 2397982

End: 2400573

Strand: Direct

Name: mcpA [H]

Synonym: RD1_2513

Alternate gene names: 110679750

Gene position: 2397982-2400573 (Clockwise)

Preceding gene: 110679749

Following gene: 110679752

Centisome position: 58.02

GC content: 54.55

Gene sequence:

>2592_bases
ATGCCACTCTTCAAACGGTCCAATGCAGATGGAAATCCGCTGAATTCCTTGTTTGTCAAATGCACATTCATGGTCATTCT
ATGCGTCTTGGGGGTTGTTGGCACGATTACCGTGAACGAATCCCGAAGTAAGACAAAACTGACCGAAAAAGCGTTGAGCG
AACGGGCGTCCGAAGTAACGGGACTACTCTCCATGCAATTGGGCGGTGCGATCCGGTTCGGCAATTCAGAGGCGATCAGC
GGTGTTGTGTCCGGTGTGATTGAAGCGGCCAGCCCCGACGCGACAGGTGCGCGCGTTGTGAACATCAACGGTGACGTCCT
GTATGACAGTTTTCCCGGCACGCTGGATACCGCTGCAATAGAATCGTTGACGTCCCAGGCCATTTCAGAGGCTCAACCTG
TGGCCTCACCCGACGGTTTCACCAAAGCGGTTCCGGTGTTTTTTGGGGATGACCGGGCGCTGGCAGGTGTGGTCGTGACG
GATTGGGATGCGACGCATCAACTCGCACTTTTGCGCATGACGCAGAACGAGAACCTGATGCTGGGCTCGATTGCGATGCT
CGTCGGTCTGATCCTGTCTGGTTTTTTTCTGCGCACGCAAATGTCCAAACCGCTGACGCGGATCGAATGCGCTATGACCA
GTGTTGCCGAAGGCAGTTACGATGTCGACGTGCCGTTCACCGCGCGCGGCGATGAAATTGGGAAGATTTCGCGCCGCTTG
GACAGCTTTCGTGTCTCTCTGGCTGATGCAAAGGAAGCTGAAAGGGAGAGCGCGTTCAAAAGCGCTGCCTTTGGTGGGTC
AAGTGCACCAATGATGATGGCGGATGAAAAGTTGTCTGTCATTTTTATCAACCCAAGCTGCGACGCGCTGCTAAACACCC
TTGAGGCGGATATCACAAAGCTCTGGCACGGGTTCAAAGCTGACACAGCGCTTGGATCGAACTTGACCGATTTTCAACCG
CTCAAGGCAATCACCGACAAGATACTCGCGTCCGGGCAAACGGCGTTTCCCCTGTCCGAAGTTGTCAAGATTGGCGATCA
TCTGGTGGAACTGTCGCTCAATGCGGCTCTTGATGAGCATGGCAACATGATCGGCGCCGTTATCCAATGGAGTGATCGAA
CGAAGGCCGCGCGAAATGCAGCAGTCCTGGATGCAATTGACGAGAACCAGATCCGCGTCGAGTTTAATGCCAAGGGCCAG
GTTCTTGGGGCGAACGGCAATGCCGAGACACTATTCGGTTCGGACGCTGAGGCGCTGAAGCAAAAGACATTCGATTCATG
TTTCGTATCCAATGCTGATGGAACTTTGACAGCAGCCCAGATGCTCGGTGCCGTTTTGCGAGGGGAGCCGCTGTTTGGAC
AGTTCAAGCTGCTTTCGTCCACGGGTGAAACAGAAAAGCAGGTAGATGGCAGTTTTGCAGCGGTTCTTAATCCCGAAGGC
TCGGTGGAACGGGTAATTTTCCTCGGAACGGATGTCTCCGAGAATACAGTTTTGCTTCGCAAAGCAGAAGAGGAACGTTT
GCATATCTCGCAAGAGCAGGCGGCTGTCGTGGAGGCCTTGGGTGTTGCATTGAAGGGCTTGGCAGATGGTGATCTGACCA
AGGAAATCACCAATACTTTTCCGTCAGATTATGAAAGCCTGCGTCGAGACTTCAATCTGGCAGTGGAGTCGCTGCGAAAT
GCCGTTGGTGCTGTCACTCACAATGCTGACTCGATCAGGAATGAAGCTCAGGAAATCACAAGTGCTGCGGATGATCTGTC
GCGCCGCACGGAAAAGCAGGCAGCAACGCTTGAAGAAACCGCAGCCGCGCTTGACGAACTTACCAGCTCTGTACGCTCTG
CTGCTCTGGGTGCGGATGAAGCGTCAAGGATTTCGGCAGAGGCCCAGACCAATGCAGAGACCGGCGGCGAGATATCGCGT
CAAACCGTAATTGCGATGAACGGCATCAAGAACTCCTCGCAAGAGATATCGAAAATCACTTCGGTCATTGATGATATAGC
CTTTCAAACAAACCTGTTGGCCCTGAATGCCGGCGTGGAAGCTGCGCGCGCAGGGGAGGCGGGACGTGGCTTTGCAGTGG
TTGCGACTGAGGTGCGCGCGCTAGCACAGCGGTCTTCCGATGCAGCCCGTGAGATCAACACATTAATCTCGGACTCCGGA
GAGCAGGTAAGGCAGGGTGTGGAACTTGTGGATAAAACGGGCGACGCCTTGGCCGCCATTGTGAATTCTGTGGCAGAGAT
TTCGCAGCGCGTCTCCGGGATCGCCTCCTCTTCCAAGGAGCAGTCCGTTGGGTTGAATGAAATTAACTCTGCCGTCAATG
ATCTCGACCATGTAACTCAACAGAATGCCGCCATGTTTGAAGAGACGACCGCAGCCAGTCATGCGCTGACCGCCGAAGCA
GATGCGCTGGTTGCTGCAGTCTCTAAGTTCGAACTCGGCACGCTCAGTGCGATTGCACGTGGAAATGACAAGGCACGACC
AGCACAGGAGGAGCGCGTTGCACAACCACGTCCACGTTCGGACGGCAATGCAGCGCTGGCTGTTGATCACAATCAGGCGG
AACAGCTTGATGCAGGCTGGGAAGAGTTCTGA

Upstream 100 bases:

>100_bases
GCGTTAAGCGGTCTGTAACACCTGTGTTGTAACTGTGATCGCAGGCGCAGGGCGTGAACGCCTTTGTCGTTGGGTACACT
ACTATTACCGGGGTTACAAA

Downstream 100 bases:

>100_bases
TCAGTCGCAATGCTACTTAGCATCTTGTGATTTTTTAGGAAGGGAAGCACGCGACTTGATCTGACATTGCGGCTCCTGCA
GCACGCAACAAGGAATGACG

Product: methyl-accepting chemotaxis protein McpA

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 863; Mature: 862

Protein sequence:

>863_residues
MPLFKRSNADGNPLNSLFVKCTFMVILCVLGVVGTITVNESRSKTKLTEKALSERASEVTGLLSMQLGGAIRFGNSEAIS
GVVSGVIEAASPDATGARVVNINGDVLYDSFPGTLDTAAIESLTSQAISEAQPVASPDGFTKAVPVFFGDDRALAGVVVT
DWDATHQLALLRMTQNENLMLGSIAMLVGLILSGFFLRTQMSKPLTRIECAMTSVAEGSYDVDVPFTARGDEIGKISRRL
DSFRVSLADAKEAERESAFKSAAFGGSSAPMMMADEKLSVIFINPSCDALLNTLEADITKLWHGFKADTALGSNLTDFQP
LKAITDKILASGQTAFPLSEVVKIGDHLVELSLNAALDEHGNMIGAVIQWSDRTKAARNAAVLDAIDENQIRVEFNAKGQ
VLGANGNAETLFGSDAEALKQKTFDSCFVSNADGTLTAAQMLGAVLRGEPLFGQFKLLSSTGETEKQVDGSFAAVLNPEG
SVERVIFLGTDVSENTVLLRKAEEERLHISQEQAAVVEALGVALKGLADGDLTKEITNTFPSDYESLRRDFNLAVESLRN
AVGAVTHNADSIRNEAQEITSAADDLSRRTEKQAATLEETAAALDELTSSVRSAALGADEASRISAEAQTNAETGGEISR
QTVIAMNGIKNSSQEISKITSVIDDIAFQTNLLALNAGVEAARAGEAGRGFAVVATEVRALAQRSSDAAREINTLISDSG
EQVRQGVELVDKTGDALAAIVNSVAEISQRVSGIASSSKEQSVGLNEINSAVNDLDHVTQQNAAMFEETTAASHALTAEA
DALVAAVSKFELGTLSAIARGNDKARPAQEERVAQPRPRSDGNAALAVDHNQAEQLDAGWEEF

Sequences:

>Translated_863_residues
MPLFKRSNADGNPLNSLFVKCTFMVILCVLGVVGTITVNESRSKTKLTEKALSERASEVTGLLSMQLGGAIRFGNSEAIS
GVVSGVIEAASPDATGARVVNINGDVLYDSFPGTLDTAAIESLTSQAISEAQPVASPDGFTKAVPVFFGDDRALAGVVVT
DWDATHQLALLRMTQNENLMLGSIAMLVGLILSGFFLRTQMSKPLTRIECAMTSVAEGSYDVDVPFTARGDEIGKISRRL
DSFRVSLADAKEAERESAFKSAAFGGSSAPMMMADEKLSVIFINPSCDALLNTLEADITKLWHGFKADTALGSNLTDFQP
LKAITDKILASGQTAFPLSEVVKIGDHLVELSLNAALDEHGNMIGAVIQWSDRTKAARNAAVLDAIDENQIRVEFNAKGQ
VLGANGNAETLFGSDAEALKQKTFDSCFVSNADGTLTAAQMLGAVLRGEPLFGQFKLLSSTGETEKQVDGSFAAVLNPEG
SVERVIFLGTDVSENTVLLRKAEEERLHISQEQAAVVEALGVALKGLADGDLTKEITNTFPSDYESLRRDFNLAVESLRN
AVGAVTHNADSIRNEAQEITSAADDLSRRTEKQAATLEETAAALDELTSSVRSAALGADEASRISAEAQTNAETGGEISR
QTVIAMNGIKNSSQEISKITSVIDDIAFQTNLLALNAGVEAARAGEAGRGFAVVATEVRALAQRSSDAAREINTLISDSG
EQVRQGVELVDKTGDALAAIVNSVAEISQRVSGIASSSKEQSVGLNEINSAVNDLDHVTQQNAAMFEETTAASHALTAEA
DALVAAVSKFELGTLSAIARGNDKARPAQEERVAQPRPRSDGNAALAVDHNQAEQLDAGWEEF
>Mature_862_residues
PLFKRSNADGNPLNSLFVKCTFMVILCVLGVVGTITVNESRSKTKLTEKALSERASEVTGLLSMQLGGAIRFGNSEAISG
VVSGVIEAASPDATGARVVNINGDVLYDSFPGTLDTAAIESLTSQAISEAQPVASPDGFTKAVPVFFGDDRALAGVVVTD
WDATHQLALLRMTQNENLMLGSIAMLVGLILSGFFLRTQMSKPLTRIECAMTSVAEGSYDVDVPFTARGDEIGKISRRLD
SFRVSLADAKEAERESAFKSAAFGGSSAPMMMADEKLSVIFINPSCDALLNTLEADITKLWHGFKADTALGSNLTDFQPL
KAITDKILASGQTAFPLSEVVKIGDHLVELSLNAALDEHGNMIGAVIQWSDRTKAARNAAVLDAIDENQIRVEFNAKGQV
LGANGNAETLFGSDAEALKQKTFDSCFVSNADGTLTAAQMLGAVLRGEPLFGQFKLLSSTGETEKQVDGSFAAVLNPEGS
VERVIFLGTDVSENTVLLRKAEEERLHISQEQAAVVEALGVALKGLADGDLTKEITNTFPSDYESLRRDFNLAVESLRNA
VGAVTHNADSIRNEAQEITSAADDLSRRTEKQAATLEETAAALDELTSSVRSAALGADEASRISAEAQTNAETGGEISRQ
TVIAMNGIKNSSQEISKITSVIDDIAFQTNLLALNAGVEAARAGEAGRGFAVVATEVRALAQRSSDAAREINTLISDSGE
QVRQGVELVDKTGDALAAIVNSVAEISQRVSGIASSSKEQSVGLNEINSAVNDLDHVTQQNAAMFEETTAASHALTAEAD
ALVAAVSKFELGTLSAIARGNDKARPAQEERVAQPRPRSDGNAALAVDHNQAEQLDAGWEEF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein. Note=Localized at the flagellum-bearing pole of the swarmer cell [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=340, Percent_Identity=42.9411764705882, Blast_Score=216, Evalue=7e-57,
Organism=Escherichia coli, GI1787690, Length=300, Percent_Identity=43.6666666666667, Blast_Score=210, Evalue=2e-55,
Organism=Escherichia coli, GI2367378, Length=264, Percent_Identity=48.4848484848485, Blast_Score=207, Evalue=2e-54,
Organism=Escherichia coli, GI1788194, Length=293, Percent_Identity=41.9795221843003, Blast_Score=194, Evalue=2e-50,
Organism=Escherichia coli, GI1789453, Length=250, Percent_Identity=38.8, Blast_Score=166, Evalue=9e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 91195; Mature: 91064

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLFKRSNADGNPLNSLFVKCTFMVILCVLGVVGTITVNESRSKTKLTEKALSERASEVT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHH
GLLSMQLGGAIRFGNSEAISGVVSGVIEAASPDATGARVVNINGDVLYDSFPGTLDTAAI
HHHHHHHCCEEEECCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEECCCCCCHHHHHH
ESLTSQAISEAQPVASPDGFTKAVPVFFGDDRALAGVVVTDWDATHQLALLRMTQNENLM
HHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCHHHEEEEEECCCCCEE
LGSIAMLVGLILSGFFLRTQMSKPLTRIECAMTSVAEGSYDVDVPFTARGDEIGKISRRL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHH
DSFRVSLADAKEAERESAFKSAAFGGSSAPMMMADEKLSVIFINPSCDALLNTLEADITK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEEEECCCHHHHHHHHHHHHHH
LWHGFKADTALGSNLTDFQPLKAITDKILASGQTAFPLSEVVKIGDHLVELSLNAALDEH
HHCCCCCCHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GNMIGAVIQWSDRTKAARNAAVLDAIDENQIRVEFNAKGQVLGANGNAETLFGSDAEALK
CCEEEEEEEECCHHHHHHCHHHHEECCCCEEEEEECCCCEEEECCCCCCEEECCCHHHHH
QKTFDSCFVSNADGTLTAAQMLGAVLRGEPLFGQFKLLSSTGETEKQVDGSFAAVLNPEG
HHHHHHHEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHCCCCEEEEECCCC
SVERVIFLGTDVSENTVLLRKAEEERLHISQEQAAVVEALGVALKGLADGDLTKEITNTF
CEEEEEEEECCCCCCEEEEEECCHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC
PSDYESLRRDFNLAVESLRNAVGAVTHNADSIRNEAQEITSAADDLSRRTEKQAATLEET
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAALDELTSSVRSAALGADEASRISAEAQTNAETGGEISRQTVIAMNGIKNSSQEISKIT
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHH
SVIDDIAFQTNLLALNAGVEAARAGEAGRGFAVVATEVRALAQRSSDAAREINTLISDSG
HHHHHHHHHHCEEEEECCCHHHHCCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHCCCC
EQVRQGVELVDKTGDALAAIVNSVAEISQRVSGIASSSKEQSVGLNEINSAVNDLDHVTQ
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHH
QNAAMFEETTAASHALTAEADALVAAVSKFELGTLSAIARGNDKARPAQEERVAQPRPRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHCCCCCCCC
DGNAALAVDHNQAEQLDAGWEEF
CCCEEEEEECCHHHHHCCCCCCC
>Mature Secondary Structure 
PLFKRSNADGNPLNSLFVKCTFMVILCVLGVVGTITVNESRSKTKLTEKALSERASEVT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHH
GLLSMQLGGAIRFGNSEAISGVVSGVIEAASPDATGARVVNINGDVLYDSFPGTLDTAAI
HHHHHHHCCEEEECCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEECCCCCCHHHHHH
ESLTSQAISEAQPVASPDGFTKAVPVFFGDDRALAGVVVTDWDATHQLALLRMTQNENLM
HHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCHHHEEEEEECCCCCEE
LGSIAMLVGLILSGFFLRTQMSKPLTRIECAMTSVAEGSYDVDVPFTARGDEIGKISRRL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHH
DSFRVSLADAKEAERESAFKSAAFGGSSAPMMMADEKLSVIFINPSCDALLNTLEADITK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEEEECCCHHHHHHHHHHHHHH
LWHGFKADTALGSNLTDFQPLKAITDKILASGQTAFPLSEVVKIGDHLVELSLNAALDEH
HHCCCCCCHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GNMIGAVIQWSDRTKAARNAAVLDAIDENQIRVEFNAKGQVLGANGNAETLFGSDAEALK
CCEEEEEEEECCHHHHHHCHHHHEECCCCEEEEEECCCCEEEECCCCCCEEECCCHHHHH
QKTFDSCFVSNADGTLTAAQMLGAVLRGEPLFGQFKLLSSTGETEKQVDGSFAAVLNPEG
HHHHHHHEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHCCCCEEEEECCCC
SVERVIFLGTDVSENTVLLRKAEEERLHISQEQAAVVEALGVALKGLADGDLTKEITNTF
CEEEEEEEECCCCCCEEEEEECCHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC
PSDYESLRRDFNLAVESLRNAVGAVTHNADSIRNEAQEITSAADDLSRRTEKQAATLEET
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAALDELTSSVRSAALGADEASRISAEAQTNAETGGEISRQTVIAMNGIKNSSQEISKIT
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHH
SVIDDIAFQTNLLALNAGVEAARAGEAGRGFAVVATEVRALAQRSSDAAREINTLISDSG
HHHHHHHHHHCEEEEECCCHHHHCCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHCCCC
EQVRQGVELVDKTGDALAAIVNSVAEISQRVSGIASSSKEQSVGLNEINSAVNDLDHVTQ
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHH
QNAAMFEETTAASHALTAEADALVAAVSKFELGTLSAIARGNDKARPAQEERVAQPRPRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHCCCCCCCC
DGNAALAVDHNQAEQLDAGWEEF
CCCEEEEEECCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1577276; 11259647 [H]