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The map label for this gene is 110679729

Identifier: 110679729

GI number: 110679729

Start: 2373866

End: 2375803

Strand: Reverse

Name: 110679729

Synonym: RD1_2490

Alternate gene names: NA

Gene position: 2375803-2373866 (Counterclockwise)

Preceding gene: 110679730

Following gene: 110679728

Centisome position: 57.48

GC content: 44.38

Gene sequence:

>1938_bases
ATGAGTAATATTGACGACCGTATGCGTGAAGTTCGAGCAGTTCTTACTGAAACTCTTCCATTTGAACTACCTCTCGGATT
TACAAACGAAAATCTGTTCCTCTCTGAGCTGAGATTGGATCAGATGACGGGAGTTCAGCAAAACTATCTGAATAGGTTAA
GACGGCCGCACAATAACTACACTAAGCCTTATCTTTACAGCATAAACCGCTCTCGGCGATCAAAGAACACGCTAGGTCTT
ATCCATCCAGCAGTTCAGCTTAGGATTGCTACTTTCTATTCTGAGTTTGAGCAAACTATCATTCAGGCTTGCGGTCGGAG
TACTTTTTCGATCCGCCATCCATACGAAGCTTTGCGTATATACTCTAAGGATAGCGCGAAGGATGTGCGGAAAAGGTGGA
AGCTTGCTCTTCCCGGAGAGAATGTAGGGCATGCAATAAAAACATCCTACACCTCATCTTACTTTGCCTACCGGAAGTAT
TTGTTGCTTGATAAATTCTTCTCTTCAAACGAGATAATCAGGCTAGAGGGAAAGTATTCTAGATTGAGAATGCTGGATGT
TTCCAAGTGCTTTTTCAATATTTATACCCATTCAATAAGTTGGTCTCTCAAAGATAAGGATTTTTCCAAGAAGAACGCAA
AAAACTATTCTTTCGAACAACAGTTTGACACCTTAATGCAGCACTCAAATTATAATGAGACTGCTGGTATTCTCGTTGGC
CCTGAGGTTTCTCGTATTTTTGCGGAAATTATTCTTCAGAGGGTTGACGTCGAGCTTGAGCGAGCAGTTTCCAAACGATT
GAAATTAGAGTGTGGTCGAGACTATGATATTCGAAGGTACGTAGACGATTTCCACCTATTCGCAAATGATGAAGACGTTC
TAGATAAGGTAGAGGGTGTCTTAGCCGAAATTCTTGAGACGTATAAGCTGTTCTTGAATACGGGGAAGAGCGAAGAGGTT
GAACGCCCTTTTGTGACTGGAATTTCCCGGTTGAAGTTTGAAGTCAGCGGCATTTGCGCCAAGCTGTATGACGAGCTTAC
GGTGGATTTGAGTAACAATGAAGAAAGTTCAGCTGAAGCTCGTGAAACTCTGCGCAAAGCTCGGGTTTCGCTAGACGCGC
TAAGACACATTGGTGGAACCGAAAGGGCGCTTTTGCCTAGTGCTATGTCTGAGGTTTTTACAACACTTTCCCGTATTGTA
AGAAGTTTAAACAAAATGACGGAACTTGACCTGAGCGAAGCGCAATCAGAAGATTTGATCGCAAGGGTGAAAACTGTTGT
TCGTGTCTTGTTTTACCTGTCAGCAATAGATTTTCGAGTTCCACCAATCATTCGGCTGTCCTTAATTTTGAAGGAGGTCG
TGAGGCTGTCGAAGAAGCTGGCCCAGCCGTACCGTGAAACTATCACCGGATACTTGGTGTACGAGTTGAGTGAGTTGATG
GCGACTCACTACGTCGAAGAGGCAGAGGCCGTGGGCTTAGAAGTGGCAAATACCTTTGTTTTGGGTTTGGTTGTTGAGCC
GGCTCTTTTTGCAATGCAAGAAAGCTCTGCGAAGTTTCTGCACAATGTTCTCACCGGAAAGCATAAATGCTATTTTTCGG
TTTTGTGTGCGCTCCACGCACTGAACTCGGTGGAAAATATCAAAGAGGACGAAAAAAATGCCTTCGTTGATGGTCTGATC
AATAGGATATTGTCCAACGACTTCGAAATTGAGGTGAGTTGCGAGGAATACCTTATTTTTTGTGATGCATTGTCTTGCCC
TGCGATAGACAGAGACGTGCGTTGGCAGACATTCCAAGACAAGCTTGGCGGACAGGGATTGAGTAAAGCGGCGTTTGATG
AGTTGGCGTTATGCTTCCGCCACATCAACTGGGATGCAAATGGGCCGGGTTTTGAACTAGTTCAGCGTAGGTTGCCTCCC
GTCTATTTTTCAGGCTAA

Upstream 100 bases:

>100_bases
GCTGAGCTGAGAAAGCTGTCATTCGCGCAGGGCTACAGAGCGCGCATCATACGTCGGCACTCGCGGGCGCGTGTCGCAGA
GATTTTCAGGGCTTGGAATA

Downstream 100 bases:

>100_bases
CTGCTTTCTGGCGGCAAGGTTCTTGTGCTAGATCGCTAACGCTGCTTCGGTAGCCGAGGTTGACGTCTACTAACGCTGAC
TTCGCTTGGTGTAAGTAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 645; Mature: 644

Protein sequence:

>645_residues
MSNIDDRMREVRAVLTETLPFELPLGFTNENLFLSELRLDQMTGVQQNYLNRLRRPHNNYTKPYLYSINRSRRSKNTLGL
IHPAVQLRIATFYSEFEQTIIQACGRSTFSIRHPYEALRIYSKDSAKDVRKRWKLALPGENVGHAIKTSYTSSYFAYRKY
LLLDKFFSSNEIIRLEGKYSRLRMLDVSKCFFNIYTHSISWSLKDKDFSKKNAKNYSFEQQFDTLMQHSNYNETAGILVG
PEVSRIFAEIILQRVDVELERAVSKRLKLECGRDYDIRRYVDDFHLFANDEDVLDKVEGVLAEILETYKLFLNTGKSEEV
ERPFVTGISRLKFEVSGICAKLYDELTVDLSNNEESSAEARETLRKARVSLDALRHIGGTERALLPSAMSEVFTTLSRIV
RSLNKMTELDLSEAQSEDLIARVKTVVRVLFYLSAIDFRVPPIIRLSLILKEVVRLSKKLAQPYRETITGYLVYELSELM
ATHYVEEAEAVGLEVANTFVLGLVVEPALFAMQESSAKFLHNVLTGKHKCYFSVLCALHALNSVENIKEDEKNAFVDGLI
NRILSNDFEIEVSCEEYLIFCDALSCPAIDRDVRWQTFQDKLGGQGLSKAAFDELALCFRHINWDANGPGFELVQRRLPP
VYFSG

Sequences:

>Translated_645_residues
MSNIDDRMREVRAVLTETLPFELPLGFTNENLFLSELRLDQMTGVQQNYLNRLRRPHNNYTKPYLYSINRSRRSKNTLGL
IHPAVQLRIATFYSEFEQTIIQACGRSTFSIRHPYEALRIYSKDSAKDVRKRWKLALPGENVGHAIKTSYTSSYFAYRKY
LLLDKFFSSNEIIRLEGKYSRLRMLDVSKCFFNIYTHSISWSLKDKDFSKKNAKNYSFEQQFDTLMQHSNYNETAGILVG
PEVSRIFAEIILQRVDVELERAVSKRLKLECGRDYDIRRYVDDFHLFANDEDVLDKVEGVLAEILETYKLFLNTGKSEEV
ERPFVTGISRLKFEVSGICAKLYDELTVDLSNNEESSAEARETLRKARVSLDALRHIGGTERALLPSAMSEVFTTLSRIV
RSLNKMTELDLSEAQSEDLIARVKTVVRVLFYLSAIDFRVPPIIRLSLILKEVVRLSKKLAQPYRETITGYLVYELSELM
ATHYVEEAEAVGLEVANTFVLGLVVEPALFAMQESSAKFLHNVLTGKHKCYFSVLCALHALNSVENIKEDEKNAFVDGLI
NRILSNDFEIEVSCEEYLIFCDALSCPAIDRDVRWQTFQDKLGGQGLSKAAFDELALCFRHINWDANGPGFELVQRRLPP
VYFSG
>Mature_644_residues
SNIDDRMREVRAVLTETLPFELPLGFTNENLFLSELRLDQMTGVQQNYLNRLRRPHNNYTKPYLYSINRSRRSKNTLGLI
HPAVQLRIATFYSEFEQTIIQACGRSTFSIRHPYEALRIYSKDSAKDVRKRWKLALPGENVGHAIKTSYTSSYFAYRKYL
LLDKFFSSNEIIRLEGKYSRLRMLDVSKCFFNIYTHSISWSLKDKDFSKKNAKNYSFEQQFDTLMQHSNYNETAGILVGP
EVSRIFAEIILQRVDVELERAVSKRLKLECGRDYDIRRYVDDFHLFANDEDVLDKVEGVLAEILETYKLFLNTGKSEEVE
RPFVTGISRLKFEVSGICAKLYDELTVDLSNNEESSAEARETLRKARVSLDALRHIGGTERALLPSAMSEVFTTLSRIVR
SLNKMTELDLSEAQSEDLIARVKTVVRVLFYLSAIDFRVPPIIRLSLILKEVVRLSKKLAQPYRETITGYLVYELSELMA
THYVEEAEAVGLEVANTFVLGLVVEPALFAMQESSAKFLHNVLTGKHKCYFSVLCALHALNSVENIKEDEKNAFVDGLIN
RILSNDFEIEVSCEEYLIFCDALSCPAIDRDVRWQTFQDKLGGQGLSKAAFDELALCFRHINWDANGPGFELVQRRLPPV
YFSG

Specific function: Unknown

COG id: COG3344

COG function: function code L; Retron-type reverse transcriptase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74150; Mature: 74019

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNIDDRMREVRAVLTETLPFELPLGFTNENLFLSELRLDQMTGVQQNYLNRLRRPHNNY
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHCCHHHHHHHHHCCCCCCC
TKPYLYSINRSRRSKNTLGLIHPAVQLRIATFYSEFEQTIIQACGRSTFSIRHPYEALRI
CCCEEEECCHHHCCCCCHHEECHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHH
YSKDSAKDVRKRWKLALPGENVGHAIKTSYTSSYFAYRKYLLLDKFFSSNEIIRLEGKYS
HCCCCHHHHHHHCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCH
RLRMLDVSKCFFNIYTHSISWSLKDKDFSKKNAKNYSFEQQFDTLMQHSNYNETAGILVG
HHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEC
PEVSRIFAEIILQRVDVELERAVSKRLKLECGRDYDIRRYVDDFHLFANDEDVLDKVEGV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH
LAEILETYKLFLNTGKSEEVERPFVTGISRLKFEVSGICAKLYDELTVDLSNNEESSAEA
HHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHH
RETLRKARVSLDALRHIGGTERALLPSAMSEVFTTLSRIVRSLNKMTELDLSEAQSEDLI
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ARVKTVVRVLFYLSAIDFRVPPIIRLSLILKEVVRLSKKLAQPYRETITGYLVYELSELM
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATHYVEEAEAVGLEVANTFVLGLVVEPALFAMQESSAKFLHNVLTGKHKCYFSVLCALHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LNSVENIKEDEKNAFVDGLINRILSNDFEIEVSCEEYLIFCDALSCPAIDRDVRWQTFQD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHEEEECCCCCCCCCCCCCHHHHHH
KLGGQGLSKAAFDELALCFRHINWDANGPGFELVQRRLPPVYFSG
HHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SNIDDRMREVRAVLTETLPFELPLGFTNENLFLSELRLDQMTGVQQNYLNRLRRPHNNY
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHCCHHHHHHHHHCCCCCCC
TKPYLYSINRSRRSKNTLGLIHPAVQLRIATFYSEFEQTIIQACGRSTFSIRHPYEALRI
CCCEEEECCHHHCCCCCHHEECHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHH
YSKDSAKDVRKRWKLALPGENVGHAIKTSYTSSYFAYRKYLLLDKFFSSNEIIRLEGKYS
HCCCCHHHHHHHCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCH
RLRMLDVSKCFFNIYTHSISWSLKDKDFSKKNAKNYSFEQQFDTLMQHSNYNETAGILVG
HHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEC
PEVSRIFAEIILQRVDVELERAVSKRLKLECGRDYDIRRYVDDFHLFANDEDVLDKVEGV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH
LAEILETYKLFLNTGKSEEVERPFVTGISRLKFEVSGICAKLYDELTVDLSNNEESSAEA
HHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHH
RETLRKARVSLDALRHIGGTERALLPSAMSEVFTTLSRIVRSLNKMTELDLSEAQSEDLI
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ARVKTVVRVLFYLSAIDFRVPPIIRLSLILKEVVRLSKKLAQPYRETITGYLVYELSELM
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATHYVEEAEAVGLEVANTFVLGLVVEPALFAMQESSAKFLHNVLTGKHKCYFSVLCALHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LNSVENIKEDEKNAFVDGLINRILSNDFEIEVSCEEYLIFCDALSCPAIDRDVRWQTFQD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHEEEECCCCCCCCCCCCCHHHHHH
KLGGQGLSKAAFDELALCFRHINWDANGPGFELVQRRLPPVYFSG
HHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA