| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110679713
Identifier: 110679713
GI number: 110679713
Start: 2354043
End: 2354312
Strand: Reverse
Name: 110679713
Synonym: RD1_2468
Alternate gene names: NA
Gene position: 2354312-2354043 (Counterclockwise)
Preceding gene: 110679715
Following gene: 110679712
Centisome position: 56.96
GC content: 58.15
Gene sequence:
>270_bases ATGAGCAAAAAACACACAACGTCGATCAAGAAAAATGACACCTATGAGGCCTTGCGCGCGGATGGCGCGTCCAAGTCAAA GGCCGCAGCGATCGCCAACGCTCAGGCCAACGACACCATGTCGCCGTCTGAAAAAGGCGGCAAGGCGCCCCGTTATGAAG CGCGCACGAAAGACGATCTGATGGCGCTTGCACGCGACCGGGACATCTCCGGCAGATCGACCATGACCAAGGAAGAACTC ATCCGCGCGTTGCGCGATGAGAGCGTCTGA
Upstream 100 bases:
>100_bases CACCGACGGTCAGGAACTCTGAACGATAGGGTTTGTTCCACATCTTCCATCATGGAACTTGTGAGCGGCCCCGACGTTAG TTGCTCAAACGGAGGACCGT
Downstream 100 bases:
>100_bases CGAAATACCTGACACATCAGATATCACGTAACGCGTTGAAATATATGGCTTCAGGCAGCATTGCGCAATTCAGGTTTTTC CCATGACGCTTCAGATACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MSKKHTTSIKKNDTYEALRADGASKSKAAAIANAQANDTMSPSEKGGKAPRYEARTKDDLMALARDRDISGRSTMTKEEL IRALRDESV
Sequences:
>Translated_89_residues MSKKHTTSIKKNDTYEALRADGASKSKAAAIANAQANDTMSPSEKGGKAPRYEARTKDDLMALARDRDISGRSTMTKEEL IRALRDESV >Mature_88_residues SKKHTTSIKKNDTYEALRADGASKSKAAAIANAQANDTMSPSEKGGKAPRYEARTKDDLMALARDRDISGRSTMTKEELI RALRDESV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9730; Mature: 9599
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKHTTSIKKNDTYEALRADGASKSKAAAIANAQANDTMSPSEKGGKAPRYEARTKDDL CCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHH MALARDRDISGRSTMTKEELIRALRDESV HHHHHCCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure SKKHTTSIKKNDTYEALRADGASKSKAAAIANAQANDTMSPSEKGGKAPRYEARTKDDL CCCCCCCCCCCCHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHH MALARDRDISGRSTMTKEELIRALRDESV HHHHHCCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA