| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110679682
Identifier: 110679682
GI number: 110679682
Start: 2320946
End: 2321254
Strand: Reverse
Name: 110679682
Synonym: RD1_2437
Alternate gene names: NA
Gene position: 2321254-2320946 (Counterclockwise)
Preceding gene: 110679683
Following gene: 110679680
Centisome position: 56.16
GC content: 60.52
Gene sequence:
>309_bases ATGTCCGAAAAAATGCCCGGTGCCGCCGGTGATCTCGCCGAAGAATTCCCCCACATCTGGAACGCCTATCAGATGCTTGG CCGTGCTGCCGCAGATTGCGGCCCGCTCACTGATCGCGAGCGTCGCCTGGTGAAACTCGCATTGTCTGTTGGTGCAGGTT CAGAAGGCGCAGTACACTCCCACACGCGGCGCGCAGAAGCCGAGGGCATTGAGAAGGAAGCGCTGCTGCAGGTAGCGATG CTGGCCATTGGCCCGCTTGGTTTACCGCGTGCGGTTGCGGCAAAAACCTGGATCGAAGACCTCGACTGA
Upstream 100 bases:
>100_bases AGTGAGCGGCAACCGCGTGAACATCTCGGATCAGAAAGATATCGAAAACTTCGCGAAACCAAGCCCCCTCATTGATGACT ATTCAACGTAAGGAAAACGC
Downstream 100 bases:
>100_bases AGGCGCCGCCGTCGTCGTCAGCTTTCACATGGTGGCACCATCACGCCGCCGCCTTCAAGCCCGTCAAGGACATCCATGCG TCGTGTGAGCGGGACAAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MSEKMPGAAGDLAEEFPHIWNAYQMLGRAAADCGPLTDRERRLVKLALSVGAGSEGAVHSHTRRAEAEGIEKEALLQVAM LAIGPLGLPRAVAAKTWIEDLD
Sequences:
>Translated_102_residues MSEKMPGAAGDLAEEFPHIWNAYQMLGRAAADCGPLTDRERRLVKLALSVGAGSEGAVHSHTRRAEAEGIEKEALLQVAM LAIGPLGLPRAVAAKTWIEDLD >Mature_101_residues SEKMPGAAGDLAEEFPHIWNAYQMLGRAAADCGPLTDRERRLVKLALSVGAGSEGAVHSHTRRAEAEGIEKEALLQVAML AIGPLGLPRAVAAKTWIEDLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10877; Mature: 10745
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKMPGAAGDLAEEFPHIWNAYQMLGRAAADCGPLTDRERRLVKLALSVGAGSEGAVHS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHH HTRRAEAEGIEKEALLQVAMLAIGPLGLPRAVAAKTWIEDLD HHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure SEKMPGAAGDLAEEFPHIWNAYQMLGRAAADCGPLTDRERRLVKLALSVGAGSEGAVHS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHH HTRRAEAEGIEKEALLQVAMLAIGPLGLPRAVAAKTWIEDLD HHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA