| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is phnG [H]
Identifier: 110679643
GI number: 110679643
Start: 2282970
End: 2283425
Strand: Reverse
Name: phnG [H]
Synonym: RD1_2394
Alternate gene names: 110679643
Gene position: 2283425-2282970 (Counterclockwise)
Preceding gene: 110679645
Following gene: 110679642
Centisome position: 55.25
GC content: 61.62
Gene sequence:
>456_bases ATGAAAGACACTGTAAGCGATAATAATCCCCGCGGAGCTTGGATGGGTCTGCTGGCCAAAGCGCCCGAGGGCCGAGTGGC TGCCCTGCTCGATGGTGAAACATCGCGCCCTGCTTTCACTTGGCTGCGCGCACCGGAGATTGGCAGCACGATGGTGCGTG CGCGCGCTGGTGCCACCGGTGCGCCCTTCAATCTGGGCGAGATGACCATAACCCGCTGCGCACTGACGCTGGAGACCGGC GAGGTCGGACACAGCTACATTCAGGGGCGGCGCAAGGCAGATGCCGAGGTCGCTGCGCTGATTGATGCGCTTATGCAGAC CCCAATGGCGAACAGGCTGCGCGAGACGGTTCTTGAGCCTCTGGAAGCAGAAATGAACGCCATGAAAGCTGCCCGCGCCG CCAAGGCGGCCGCAACCAAGGTTGATTTCTTTACCATGACCCGGGGAGAAGACTGA
Upstream 100 bases:
>100_bases TGTCAGAGCTGTCACGCAAAATTCACAAATCTCTTCTGTCATAAAGTTGGGGATATGGTAGAATATGTATAGTTGTATAG GAAAGAGACAAGTTGTCGAT
Downstream 100 bases:
>100_bases TGCAGGCAAACACCCTGTCGGGCGGCTTTGCCGATCCGGCCATCCAGTCGGCCCAAGCCTTTCGCAGTGTGATGGAGGCC ATGGCGCGTCCGGGCACCCT
Product: alkylphosphonate utilization protein PhnG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MKDTVSDNNPRGAWMGLLAKAPEGRVAALLDGETSRPAFTWLRAPEIGSTMVRARAGATGAPFNLGEMTITRCALTLETG EVGHSYIQGRRKADAEVAALIDALMQTPMANRLRETVLEPLEAEMNAMKAARAAKAAATKVDFFTMTRGED
Sequences:
>Translated_151_residues MKDTVSDNNPRGAWMGLLAKAPEGRVAALLDGETSRPAFTWLRAPEIGSTMVRARAGATGAPFNLGEMTITRCALTLETG EVGHSYIQGRRKADAEVAALIDALMQTPMANRLRETVLEPLEAEMNAMKAARAAKAAATKVDFFTMTRGED >Mature_151_residues MKDTVSDNNPRGAWMGLLAKAPEGRVAALLDGETSRPAFTWLRAPEIGSTMVRARAGATGAPFNLGEMTITRCALTLETG EVGHSYIQGRRKADAEVAALIDALMQTPMANRLRETVLEPLEAEMNAMKAARAAKAAATKVDFFTMTRGED
Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]
COG id: COG3624
COG function: function code P; Uncharacterized enzyme of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phnG family [H]
Homologues:
Organism=Escherichia coli, GI1790539, Length=147, Percent_Identity=42.1768707482993, Blast_Score=109, Evalue=9e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009609 [H]
Pfam domain/function: PF06754 PhnG [H]
EC number: NA
Molecular weight: Translated: 16210; Mature: 16210
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDTVSDNNPRGAWMGLLAKAPEGRVAALLDGETSRPAFTWLRAPEIGSTMVRARAGATG CCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCCC APFNLGEMTITRCALTLETGEVGHSYIQGRRKADAEVAALIDALMQTPMANRLRETVLEP CCCCCCHHEEHHHEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHH LEAEMNAMKAARAAKAAATKVDFFTMTRGED HHHHHHHHHHHHHHHHHHHHHHEEEECCCCC >Mature Secondary Structure MKDTVSDNNPRGAWMGLLAKAPEGRVAALLDGETSRPAFTWLRAPEIGSTMVRARAGATG CCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCCC APFNLGEMTITRCALTLETGEVGHSYIQGRRKADAEVAALIDALMQTPMANRLRETVLEP CCCCCCHHEEHHHEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHH LEAEMNAMKAARAAKAAATKVDFFTMTRGED HHHHHHHHHHHHHHHHHHHHHHEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]