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The map label for this gene is phnM [H]

Identifier: 110679636

GI number: 110679636

Start: 2276933

End: 2278126

Strand: Reverse

Name: phnM [H]

Synonym: RD1_2387

Alternate gene names: 110679636

Gene position: 2278126-2276933 (Counterclockwise)

Preceding gene: 110679637

Following gene: 110679635

Centisome position: 55.12

GC content: 60.39

Gene sequence:

>1194_bases
ATGAATTCCCCGTTTCCCACGTCCTCTCTGGGCAAAGCTGGTGACAGTGACGTATCAGGCGATCTTTGTTTCGCCAATGC
GCAGCTTGTGCTGGCAGATCAGGTGCTTACCGGTGCGCTGACAATCGAACAAGGCGTCATTTGCGACATTACTGAGGGGG
ATCATATCCCGACCGGTGCCGTGGATTGTGCCGGTGATCTCGTTCTTCCCGGTCTTGTCGAATTGCATACAGACAATGTC
GAACGCCACATCGAACCGCGCCCGGCGGTGGACTGGCCACATTTGCCCGCCCTGATCGCCCATGATGCAGAACTGGCGTC
TACAGGCATCACGACGGTGTTTGACGCCATGCGGGTCGGCTCCATCCATAGCGGCAAGGGGCGCTACACCGACTATGCCC
GAAAGCTTGCGGATGAACTCCTCGCAGCGCGCGCGCAAGGGTATTTCAAGATTAGTCACTTCCTGCATCTGCGGGCTGAA
ATCTGTTCTGAGACGCTGCTTGAGGAATTGGCGGCTTTCGGACCCTCTGACAGGGTCGGTATCGTCAGCCTGATGGATCA
CACCCCGGGTCAGCGCCAGTTTCGGGACCTGTCGGCGCTGAAAACCTATATCGCCAAGAAACGCGGGATGGACGATGCCG
AATTTGGCGAACATGTGGAGCGCCTGCTGGCTTTGCAAAAACGCCTCGGGGCAAGGCATGAGGCAGGTGCGGTGCAAGAG
GCCCGCCGCCTCCGGGCCGTTCTGGCCAGCCATGATGATACCACCTGCGATCACGTGCAAACCTCGGCAGGAAACGGCGT
GGGTTTTGCCGAGTTTCCCACAACCGTGGAGGCCGCTGACGCTTGTCGGCTGAACGGCATTGCGGTGATGATGGGCGCCC
CCAACCTGATCCGCGGCGGGTCGCATTCTGGCAATGTGGCAGCGGAGGTGCTCGCAAAGGCCGATCTTCTCGACATCGTG
TCGTCAGACTATGTGCCCTCGGCGCTGCTCTGGTCGGCCTTCCGCCTTGCCGATATCTGGAGCGATCTGCCCCGCGCCAT
CGCCACAGTCACCAGCAACCCCGCAAAAGCCGTGCGGCTGCATGACCGTGGTGCTTTGAAAACCGGTTTGCGCGGCGATG
TTCTGCGTGTGCGCAGCATTGGCCAAACACCGCTGCTGCGCGGCGTCTGGAGCCGGGGCAACAAGGTTGCCTAG

Upstream 100 bases:

>100_bases
CTTACGGCCCTGCACCATATCCGACCCGAACCCGGACGCGCCCAATTATCCCATGCCTCAAGGCGGCGACAGACAGCACA
TTGCAAATCGAGAGATCGAC

Downstream 100 bases:

>100_bases
GGCGGTTACGGGTGCCACTGCGTCGGGCTGCGATCAGACCTTCAGATCGGGTGATCCCTGTCAAAAACGCTGAGGATGGT
GTCGCCAACAACCCCGACTG

Product: phosphonate metabolism protein PhnM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MNSPFPTSSLGKAGDSDVSGDLCFANAQLVLADQVLTGALTIEQGVICDITEGDHIPTGAVDCAGDLVLPGLVELHTDNV
ERHIEPRPAVDWPHLPALIAHDAELASTGITTVFDAMRVGSIHSGKGRYTDYARKLADELLAARAQGYFKISHFLHLRAE
ICSETLLEELAAFGPSDRVGIVSLMDHTPGQRQFRDLSALKTYIAKKRGMDDAEFGEHVERLLALQKRLGARHEAGAVQE
ARRLRAVLASHDDTTCDHVQTSAGNGVGFAEFPTTVEAADACRLNGIAVMMGAPNLIRGGSHSGNVAAEVLAKADLLDIV
SSDYVPSALLWSAFRLADIWSDLPRAIATVTSNPAKAVRLHDRGALKTGLRGDVLRVRSIGQTPLLRGVWSRGNKVA

Sequences:

>Translated_397_residues
MNSPFPTSSLGKAGDSDVSGDLCFANAQLVLADQVLTGALTIEQGVICDITEGDHIPTGAVDCAGDLVLPGLVELHTDNV
ERHIEPRPAVDWPHLPALIAHDAELASTGITTVFDAMRVGSIHSGKGRYTDYARKLADELLAARAQGYFKISHFLHLRAE
ICSETLLEELAAFGPSDRVGIVSLMDHTPGQRQFRDLSALKTYIAKKRGMDDAEFGEHVERLLALQKRLGARHEAGAVQE
ARRLRAVLASHDDTTCDHVQTSAGNGVGFAEFPTTVEAADACRLNGIAVMMGAPNLIRGGSHSGNVAAEVLAKADLLDIV
SSDYVPSALLWSAFRLADIWSDLPRAIATVTSNPAKAVRLHDRGALKTGLRGDVLRVRSIGQTPLLRGVWSRGNKVA
>Mature_397_residues
MNSPFPTSSLGKAGDSDVSGDLCFANAQLVLADQVLTGALTIEQGVICDITEGDHIPTGAVDCAGDLVLPGLVELHTDNV
ERHIEPRPAVDWPHLPALIAHDAELASTGITTVFDAMRVGSIHSGKGRYTDYARKLADELLAARAQGYFKISHFLHLRAE
ICSETLLEELAAFGPSDRVGIVSLMDHTPGQRQFRDLSALKTYIAKKRGMDDAEFGEHVERLLALQKRLGARHEAGAVQE
ARRLRAVLASHDDTTCDHVQTSAGNGVGFAEFPTTVEAADACRLNGIAVMMGAPNLIRGGSHSGNVAAEVLAKADLLDIV
SSDYVPSALLWSAFRLADIWSDLPRAIATVTSNPAKAVRLHDRGALKTGLRGDVLRVRSIGQTPLLRGVWSRGNKVA

Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]

COG id: COG3454

COG function: function code P; Metal-dependent hydrolase involved in phosphonate metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790533, Length=380, Percent_Identity=41.8421052631579, Blast_Score=283, Evalue=2e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059
- InterPro:   IPR012696 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 42467; Mature: 42467

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSPFPTSSLGKAGDSDVSGDLCFANAQLVLADQVLTGALTIEQGVICDITEGDHIPTGA
CCCCCCCCCCCCCCCCCCCCCEEEECCEEEEHHHHHHHHEEECCCCEEEECCCCCCCCCC
VDCAGDLVLPGLVELHTDNVERHIEPRPAVDWPHLPALIAHDAELASTGITTVFDAMRVG
HHCCCCHHCCCHHHHCCCCHHHCCCCCCCCCCCCCCHHHHCCHHHHHCCHHHHHHHHHHC
SIHSGKGRYTDYARKLADELLAARAQGYFKISHFLHLRAEICSETLLEELAAFGPSDRVG
CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
IVSLMDHTPGQRQFRDLSALKTYIAKKRGMDDAEFGEHVERLLALQKRLGARHEAGAVQE
EEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ARRLRAVLASHDDTTCDHVQTSAGNGVGFAEFPTTVEAADACRLNGIAVMMGAPNLIRGG
HHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCHHHCCC
SHSGNVAAEVLAKADLLDIVSSDYVPSALLWSAFRLADIWSDLPRAIATVTSNPAKAVRL
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEE
HDRGALKTGLRGDVLRVRSIGQTPLLRGVWSRGNKVA
CCCCCHHCCCCCCHHHHHHCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MNSPFPTSSLGKAGDSDVSGDLCFANAQLVLADQVLTGALTIEQGVICDITEGDHIPTGA
CCCCCCCCCCCCCCCCCCCCCEEEECCEEEEHHHHHHHHEEECCCCEEEECCCCCCCCCC
VDCAGDLVLPGLVELHTDNVERHIEPRPAVDWPHLPALIAHDAELASTGITTVFDAMRVG
HHCCCCHHCCCHHHHCCCCHHHCCCCCCCCCCCCCCHHHHCCHHHHHCCHHHHHHHHHHC
SIHSGKGRYTDYARKLADELLAARAQGYFKISHFLHLRAEICSETLLEELAAFGPSDRVG
CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
IVSLMDHTPGQRQFRDLSALKTYIAKKRGMDDAEFGEHVERLLALQKRLGARHEAGAVQE
EEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ARRLRAVLASHDDTTCDHVQTSAGNGVGFAEFPTTVEAADACRLNGIAVMMGAPNLIRGG
HHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCHHHCCC
SHSGNVAAEVLAKADLLDIVSSDYVPSALLWSAFRLADIWSDLPRAIATVTSNPAKAVRL
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEE
HDRGALKTGLRGDVLRVRSIGQTPLLRGVWSRGNKVA
CCCCCHHCCCCCCHHHHHHCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2155230; 1840580; 7610040; 9278503 [H]