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The map label for this gene is 110679599

Identifier: 110679599

GI number: 110679599

Start: 2242625

End: 2243563

Strand: Reverse

Name: 110679599

Synonym: RD1_2344

Alternate gene names: NA

Gene position: 2243563-2242625 (Counterclockwise)

Preceding gene: 110679600

Following gene: 110679598

Centisome position: 54.28

GC content: 61.13

Gene sequence:

>939_bases
TTGGGTGCGACCGCCCTTGGCCTGCCGGGTCTGGCCCGTGCTGATACAGCTGTCAATTTTCAGCTTTCGTGGCTGCATTC
CGTGCAGTTTGGCGGCAGTTATATCGCGCTGGATCGTGGCTACTGGGCGGACCGGGGGCTTGATGTTTCCCTCTCCCAGG
GCGGCCCCAATGCCCCGGTCGAGCCGCCGGTTGTCTCGGGAACGGCACTGGTGGGCATCTCGGCCGCCGATTATACCGCC
GCCGCCGTGGCACAGGGTGCGCCTTTCAAGATCATCGCGGTGGCCATGCAAAAGAACCCCTTTGCCATTGCCTCGCTTGC
GGCCAACCCGGTCAACAGCCCGGCGGATCTGATCGGCAAGAAAATCGGGATGTCCGTGTCCAATACCCCCGTCCTGCAAG
CGTTGTGCACCATCAACGACATCGACATCACACAGATCGAGATCGTCCCGACCCAATATGACCCTGCCCCGCTGGTCAGC
GGACAGGTCGATTGCCTGCTCTGTTGGGAGACGGACCTGCCGGTCGCCATGGACATCCAAGGGGTTGAAAACACCACGAT
GCTGATGGCGGATCACGGCTATTCCGTGCATTCGCAAACCTATATCGCAACCGAAGACAGCATCGCCAACCGCCGCGCGG
ATCTTGTCAGCCTGCTCAAGGGCGAAGTGATGGGGTGGAACGATTATCTGTCCGACACGGATGCCGCCGCCGCGTTGACG
GTCGGGATGTTTCCCGATGCGGGCCTTGATTTGGCCACACAAGAGTTGCAGGCGAAGCGGCAGGTGCCGCTGATGTTCTC
GGATTTGACGCAGGCCAGTGGCTTTGGCTGGTTCACGGATGAAACCATCGCCGCCAATGTGGAAACGCTCGCGCTGCTGG
GCCGGAACGTCAGCGCGGATTTATGGGACAGATCGCTGCTGGAAGAGGCGCACGCGTAA

Upstream 100 bases:

>100_bases
CACAGACCCACCCTATCCCTCACACCTCGAAAATGGACGTTCTATGAAACAGATTACCCCCTCCACCCGACGCGCTTTTC
TTCAGAGCAGCGGGGCTGCT

Downstream 100 bases:

>100_bases
ACCCCCATGTCAGGCAAGGACATTTGCTGCGCGGGGCTTACCAAACGCTTTGAGGATGGCGCGGCCATCGGACCGCTTGA
CCTGACCTTTGAAGCCGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NMT1/THI5-Like Domain-Containing Protein; Diguanylate Cyclase; Twin-Arginine Translocation Pathway Signal; Histidine Kinase; NMT1/THI5 Like Family; NMT1/THI5 Like Domain-Containing Protein; GGDEF Domain-Containing Protein; NMT1/THI5-Like Protein; Nitrate/Sulfonate/Bicarbonate ABC Transporter; PAS Sensor Protein; Sensory Box Histidine Kinase; Secreted Protein; PAS/PAC Sensor Hybrid Histidine Kinase; Two Domain Sensory Box Histidine Kinase; Signal Transduction Protein; Nitrate/Sulfonate ABC Transporter; Diguanylate Cyclase Domain Protein; Diguanylate Cyclase/Phosphodiesterase; Sulfonate/Nitrate Transport System; PAS/PAC Sensor-Containg Diguanylate Cyclase; Diguanylate Cyclase With PAS/PAC Sensor; NMT1/THI5-Ike Domain-Containing Protein; NMT1/THI5 Family Protein; PAS/GGDEF Domain-Containing Protein; Tat Pathway Signal Sequence Domain-Containing Protein; PAS/PAC Sensor Signal Transduction Histidine Kinase; Permease Protein Of ABC Transporter; Periplasmic-Component Of ABC Transporter; Thiamine Biosynthesis Protein; Diguanylate Cyclase With Extracellular Sensor; PasGgdef; Lipoprotein; PAS/PAC Sensor-Containing Diguanylate Cyclase; Multi-Sensor Signal Transduction Histidine Kinase

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MGATALGLPGLARADTAVNFQLSWLHSVQFGGSYIALDRGYWADRGLDVSLSQGGPNAPVEPPVVSGTALVGISAADYTA
AAVAQGAPFKIIAVAMQKNPFAIASLAANPVNSPADLIGKKIGMSVSNTPVLQALCTINDIDITQIEIVPTQYDPAPLVS
GQVDCLLCWETDLPVAMDIQGVENTTMLMADHGYSVHSQTYIATEDSIANRRADLVSLLKGEVMGWNDYLSDTDAAAALT
VGMFPDAGLDLATQELQAKRQVPLMFSDLTQASGFGWFTDETIAANVETLALLGRNVSADLWDRSLLEEAHA

Sequences:

>Translated_312_residues
MGATALGLPGLARADTAVNFQLSWLHSVQFGGSYIALDRGYWADRGLDVSLSQGGPNAPVEPPVVSGTALVGISAADYTA
AAVAQGAPFKIIAVAMQKNPFAIASLAANPVNSPADLIGKKIGMSVSNTPVLQALCTINDIDITQIEIVPTQYDPAPLVS
GQVDCLLCWETDLPVAMDIQGVENTTMLMADHGYSVHSQTYIATEDSIANRRADLVSLLKGEVMGWNDYLSDTDAAAALT
VGMFPDAGLDLATQELQAKRQVPLMFSDLTQASGFGWFTDETIAANVETLALLGRNVSADLWDRSLLEEAHA
>Mature_311_residues
GATALGLPGLARADTAVNFQLSWLHSVQFGGSYIALDRGYWADRGLDVSLSQGGPNAPVEPPVVSGTALVGISAADYTAA
AVAQGAPFKIIAVAMQKNPFAIASLAANPVNSPADLIGKKIGMSVSNTPVLQALCTINDIDITQIEIVPTQYDPAPLVSG
QVDCLLCWETDLPVAMDIQGVENTTMLMADHGYSVHSQTYIATEDSIANRRADLVSLLKGEVMGWNDYLSDTDAAAALTV
GMFPDAGLDLATQELQAKRQVPLMFSDLTQASGFGWFTDETIAANVETLALLGRNVSADLWDRSLLEEAHA

Specific function: Unknown

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32925; Mature: 32793

Theoretical pI: Translated: 4.00; Mature: 4.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGATALGLPGLARADTAVNFQLSWLHSVQFGGSYIALDRGYWADRGLDVSLSQGGPNAPV
CCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCEEEEEECCCCCCCCEEEEECCCCCCCCC
EPPVVSGTALVGISAADYTAAAVAQGAPFKIIAVAMQKNPFAIASLAANPVNSPADLIGK
CCCEECCEEEEEEECCCHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCCCCCCHHHHHH
KIGMSVSNTPVLQALCTINDIDITQIEIVPTQYDPAPLVSGQVDCLLCWETDLPVAMDIQ
HHCCCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEC
GVENTTMLMADHGYSVHSQTYIATEDSIANRRADLVSLLKGEVMGWNDYLSDTDAAAALT
CCCCEEEEEEECCCEECCEEEEEECHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHEEE
VGMFPDAGLDLATQELQAKRQVPLMFSDLTQASGFGWFTDETIAANVETLALLGRNVSAD
EECCCCCCCCHHHHHHHHHHCCCEEEHHHHHHCCCCCCCCCHHHCCHHEEEECCCCCCHH
LWDRSLLEEAHA
HHHHHHHHHHCC
>Mature Secondary Structure 
GATALGLPGLARADTAVNFQLSWLHSVQFGGSYIALDRGYWADRGLDVSLSQGGPNAPV
CCCCCCCCCCCCCCCEEEEEEEEEEEEECCCEEEEEECCCCCCCCEEEEECCCCCCCCC
EPPVVSGTALVGISAADYTAAAVAQGAPFKIIAVAMQKNPFAIASLAANPVNSPADLIGK
CCCEECCEEEEEEECCCHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCCCCCCHHHHHH
KIGMSVSNTPVLQALCTINDIDITQIEIVPTQYDPAPLVSGQVDCLLCWETDLPVAMDIQ
HHCCCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEC
GVENTTMLMADHGYSVHSQTYIATEDSIANRRADLVSLLKGEVMGWNDYLSDTDAAAALT
CCCCEEEEEEECCCEECCEEEEEECHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHEEE
VGMFPDAGLDLATQELQAKRQVPLMFSDLTQASGFGWFTDETIAANVETLALLGRNVSAD
EECCCCCCCCHHHHHHHHHHCCCEEEHHHHHHCCCCCCCCCHHHCCHHEEEECCCCCCHH
LWDRSLLEEAHA
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA