Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

Click here to switch to the map view.

The map label for this gene is 110679578

Identifier: 110679578

GI number: 110679578

Start: 2215677

End: 2215769

Strand: Direct

Name: 110679578

Synonym: RD1_2321

Alternate gene names: NA

Gene position: 2215677-2215769 (Clockwise)

Preceding gene: 110679574

Following gene: 110679579

Centisome position: 53.61

GC content: 61.29

Gene sequence:

>93_bases
TTGGTGGCATCACAGGGGTGCATGGCCGAGGGGCGCATGCGTCGAGTCACCGGATATCATGCCACCAGCCGCGCCATTCT
CAAAGCGCTTTGA

Upstream 100 bases:

>100_bases
CCTCATTGACTTCGGGGTATCCGTTCAGGGCGCGACTGACCGTCGTTTGCGACAGTTTCAGCCGTTTTGACAATTCTCTG
AGGTTCAAGGTCCGGCCTCA

Downstream 100 bases:

>100_bases
GAAAATTGTGACAGAACGATAACGCGAGTTGACAGAATTGCACGCATAGGTCACGTTTTAGGCATCCAAAGCGCTTTGAG
GCGATTCTAAAAGCGCTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 30; Mature: 30

Protein sequence:

>30_residues
MVASQGCMAEGRMRRVTGYHATSRAILKAL

Sequences:

>Translated_30_residues
MVASQGCMAEGRMRRVTGYHATSRAILKAL
>Mature_30_residues
MVASQGCMAEGRMRRVTGYHATSRAILKAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 3266; Mature: 3266

Theoretical pI: Translated: 11.36; Mature: 11.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
10.0 %Met     (Translated Protein)
13.3 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
10.0 %Met     (Mature Protein)
13.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVASQGCMAEGRMRRVTGYHATSRAILKAL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MVASQGCMAEGRMRRVTGYHATSRAILKAL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA