Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110679511

Identifier: 110679511

GI number: 110679511

Start: 2146258

End: 2147307

Strand: Direct

Name: 110679511

Synonym: RD1_2242

Alternate gene names: NA

Gene position: 2146258-2147307 (Clockwise)

Preceding gene: 110679510

Following gene: 110679512

Centisome position: 51.93

GC content: 62.57

Gene sequence:

>1050_bases
ATGAGCGTTAGACTTTGGTTGTCGATCTTCTGCATCAGCATCTTGGTGGCCGCGCAGGCCGCAGCACAGGGTTTTGCCGG
TCTGGGGCGGGACGCGAGCACCTTTAGCCAACCCGAGCGTGGATATGCGTTTTCCTTCCCTGAAGATCACGGCGCGCACC
CGGATTTCCAGATTGAGTGGTGGTATGTCACGGCGAACCTCACCGATGCCACCGGGCGCCAGATGGGGCTGCAGTGGACA
TTGTTCCGATCCGCCATTGCGCCCGAAGAAAAACCCGGCTGGGCCAGCCCGCAACTGTGGATGGGCCACGCGGCTGTCAC
CACGGAGGATGCGCATTTCGTAACAGAACGGATCGCGCGCGGCGGGGTCGGGCAGGCGGGTGTGACCGCCGCACCCTTCA
GCGCATGGATTGATGACTGGCACATGTCTGGCGATACGCTCGACGAGGTTGCAATGCGCGCCTCCGGCCCTGATTTCGGC
TATGAGGTCACGTTGAGCGCGCAAGGCCCGCTGATCTTTCACGGCGAGGCGGGCTATTCACAGAAATCCGCCAGCGGGCG
GGCCAGTTACTACTATTCGCAGCCCTTTTATACCGTCGCAGGGACGCTGTTTCTGCCCGAAGGTCCGGTCGAGGTGACAG
GCACTGCATGGCTGGACCGCGAATGGGCCTCGCAGCCCTTGGCGGCCACGCAGGTCAGCTGGGACTGGTTCTCGATGGTC
TTTGACGACGGGGTGCGCCTGATGGGGTTCACGCTGCATGACGAGGATGGCAGCGATTATACGCAAGCAACCTGGATCGA
ACCGGATGGCACCACCACCGCTTTTCCCGATGGCGCGTTTTCGGCAACCGCGTTGGCCACCACGGATGTGGCGGGCCGGG
CGGTGCCGACCAAATGGCGCGCGCAACTGCCGCAAAAAGGCGTCGATGTCACGGTGGAGGCTTTGAATGGCGCGGCCTGG
ATGACCACGTCCATTCCTTACTGGGAAGGCCCGGTTCAGATCACGGGATCGCACAGCGGGCGCGGCTATCTTGAGATGAC
GGGCTACTGA

Upstream 100 bases:

>100_bases
CTCGGCCTGCTGACGGTAGTTGCGGCGCTGCTGGCTGCGCTTTGGCCCGCGATCCGGCTGGCGCGCACCGATCCGCAATC
TCTTTTGAAGGTATTCAGCA

Downstream 100 bases:

>100_bases
GCGACCCCTTGCAGCGTCCGACCGGGATGATATGCCTTGGGCCGGGCTGCTTGGGCCGCACGATCATTTGAGGATGCCGA
TGGATTTTTCGCTCACCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Secreted Hydrolase; Hydrolase; Lipoprotein; ABC Transporter Type C Secreted Protein; Hydroxyneurosporene Synthase; Attachment Protein; ABC Transporter Lipoprotein; Secreted Hydrolase-Like; Twin-Arginine Translocation Pathway Signal; ABC-Type Transport System Hydrolase Component; Signal Peptide; Hydroxymethylglutaryl-Co A Reductase

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MSVRLWLSIFCISILVAAQAAAQGFAGLGRDASTFSQPERGYAFSFPEDHGAHPDFQIEWWYVTANLTDATGRQMGLQWT
LFRSAIAPEEKPGWASPQLWMGHAAVTTEDAHFVTERIARGGVGQAGVTAAPFSAWIDDWHMSGDTLDEVAMRASGPDFG
YEVTLSAQGPLIFHGEAGYSQKSASGRASYYYSQPFYTVAGTLFLPEGPVEVTGTAWLDREWASQPLAATQVSWDWFSMV
FDDGVRLMGFTLHDEDGSDYTQATWIEPDGTTTAFPDGAFSATALATTDVAGRAVPTKWRAQLPQKGVDVTVEALNGAAW
MTTSIPYWEGPVQITGSHSGRGYLEMTGY

Sequences:

>Translated_349_residues
MSVRLWLSIFCISILVAAQAAAQGFAGLGRDASTFSQPERGYAFSFPEDHGAHPDFQIEWWYVTANLTDATGRQMGLQWT
LFRSAIAPEEKPGWASPQLWMGHAAVTTEDAHFVTERIARGGVGQAGVTAAPFSAWIDDWHMSGDTLDEVAMRASGPDFG
YEVTLSAQGPLIFHGEAGYSQKSASGRASYYYSQPFYTVAGTLFLPEGPVEVTGTAWLDREWASQPLAATQVSWDWFSMV
FDDGVRLMGFTLHDEDGSDYTQATWIEPDGTTTAFPDGAFSATALATTDVAGRAVPTKWRAQLPQKGVDVTVEALNGAAW
MTTSIPYWEGPVQITGSHSGRGYLEMTGY
>Mature_348_residues
SVRLWLSIFCISILVAAQAAAQGFAGLGRDASTFSQPERGYAFSFPEDHGAHPDFQIEWWYVTANLTDATGRQMGLQWTL
FRSAIAPEEKPGWASPQLWMGHAAVTTEDAHFVTERIARGGVGQAGVTAAPFSAWIDDWHMSGDTLDEVAMRASGPDFGY
EVTLSAQGPLIFHGEAGYSQKSASGRASYYYSQPFYTVAGTLFLPEGPVEVTGTAWLDREWASQPLAATQVSWDWFSMVF
DDGVRLMGFTLHDEDGSDYTQATWIEPDGTTTAFPDGAFSATALATTDVAGRAVPTKWRAQLPQKGVDVTVEALNGAAWM
TTSIPYWEGPVQITGSHSGRGYLEMTGY

Specific function: Unknown

COG id: COG5621

COG function: function code R; Predicted secreted hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37944; Mature: 37813

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVRLWLSIFCISILVAAQAAAQGFAGLGRDASTFSQPERGYAFSFPEDHGAHPDFQIEW
CCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCEEECCCCCCCCCCCEEEEE
WYVTANLTDATGRQMGLQWTLFRSAIAPEEKPGWASPQLWMGHAAVTTEDAHFVTERIAR
EEEEEECCCCCCCCCCCEEEEHHHHCCCCCCCCCCCCCEEECEEEEECCCHHHHHHHHHC
GGVGQAGVTAAPFSAWIDDWHMSGDTLDEVAMRASGPDFGYEVTLSAQGPLIFHGEAGYS
CCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEEECCCCEEEECCCCCC
QKSASGRASYYYSQPFYTVAGTLFLPEGPVEVTGTAWLDREWASQPLAATQVSWDWFSMV
CCCCCCCEEEEECCCEEEEEEEEEECCCCEEEEEEEEECHHHHCCCCEEEEECHHHHHHH
FDDGVRLMGFTLHDEDGSDYTQATWIEPDGTTTAFPDGAFSATALATTDVAGRAVPTKWR
HHCCCEEEEEEEECCCCCCCCEEEEECCCCCEECCCCCCCCEEEEEECCCCCCCCCCHHH
AQLPQKGVDVTVEALNGAAWMTTSIPYWEGPVQITGSHSGRGYLEMTGY
HHCCCCCCCEEEEECCCCEEEEECCCCCCCCEEEEECCCCCEEEEECCC
>Mature Secondary Structure 
SVRLWLSIFCISILVAAQAAAQGFAGLGRDASTFSQPERGYAFSFPEDHGAHPDFQIEW
CEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCEEECCCCCCCCCCCEEEEE
WYVTANLTDATGRQMGLQWTLFRSAIAPEEKPGWASPQLWMGHAAVTTEDAHFVTERIAR
EEEEEECCCCCCCCCCCEEEEHHHHCCCCCCCCCCCCCEEECEEEEECCCHHHHHHHHHC
GGVGQAGVTAAPFSAWIDDWHMSGDTLDEVAMRASGPDFGYEVTLSAQGPLIFHGEAGYS
CCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEEECCCCEEEECCCCCC
QKSASGRASYYYSQPFYTVAGTLFLPEGPVEVTGTAWLDREWASQPLAATQVSWDWFSMV
CCCCCCCEEEEECCCEEEEEEEEEECCCCEEEEEEEEECHHHHCCCCEEEEECHHHHHHH
FDDGVRLMGFTLHDEDGSDYTQATWIEPDGTTTAFPDGAFSATALATTDVAGRAVPTKWR
HHCCCEEEEEEEECCCCCCCCEEEEECCCCCEECCCCCCCCEEEEEECCCCCCCCCCHHH
AQLPQKGVDVTVEALNGAAWMTTSIPYWEGPVQITGSHSGRGYLEMTGY
HHCCCCCCCEEEEECCCCEEEEECCCCCCCCEEEEECCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA