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The map label for this gene is 110679506

Identifier: 110679506

GI number: 110679506

Start: 2140244

End: 2141614

Strand: Direct

Name: 110679506

Synonym: RD1_2237

Alternate gene names: NA

Gene position: 2140244-2141614 (Clockwise)

Preceding gene: 110679504

Following gene: 110679508

Centisome position: 51.78

GC content: 53.61

Gene sequence:

>1371_bases
ATGCCCGGGTTTTACCTACCCACCGAATACGAATTTGACCCATCCACCGACGACTTTATCCTCAAGTCAATGTCGAAGGC
GCGCAGTTACAAACACTTCGACCTGCCTCTACCCGAAAACAGGCGAGAGCGGACAATTGATTTTGGTTCGGAAATTAAAC
CGCATCGCTTCTGGCCCTTGCTGGGTTTCACTGATCTGACGCGGCGATATGTTCGCGTCAAAGATGCTGACGGCAACTGG
CTCCGTGACGACAAAGGCAAGTTCGTCAGAAAAGAGAAGGCCAAACCAAGACCTATCCGCTTTGCCGGACACGAGGACGC
AGCTTACCTGCAAGGTTACGCAGCGCACTTGAACGGGTTCTACGAATATGCGCTCTCTGCTGACGGCAGTTCAGGTTCCG
TCCTTGCCTACAGGAAAGGTGGTGGCACTAATATTCACCACGCAAAGTCACTTTTCGATGAGATTGTAAAACGCCAAAAC
TGCTCCGTTTTCGCGATGGACATTTCTGGTTTCTTCGATTGCCTCGACCATAAGCTACTCCGCGATGAGATTGCTGGTTT
GCTCGGCGTTAGCCGACTTCAGTCTCACCATGGTCGGGTCTGGGCGAACATCACGAAATACGCATGGGTCGAGACGGACG
ACCTGGACAAGCTGCTCGGACGGAAACGAAACGGTCACGGACGCGTTTGCTCGCCACAAGACTTCAAGGCCCATGTGCAA
GGACGCAAGAGCGGTTTGATCCGCCGTCATGACCGCGACTATGGCATCCCGCAAGGGACACCTGTCTCTGGCCTTTACGC
GAACATCTACCTTCGCTCTTTCGACCGTGAGATGATTGCTATGTGCGCGAAGTATGGTGGCTCCTATCGTCGCTATTCGG
ACGACATTGCAGTCGTTCTTCCGCTTGGTGCCAAGGTCCGCCATGTGGTTGCTATTGTCGAAAAGATGCTTTCGGACTTC
GGCCTCGCAATGTCGGTCGAGAAAACCGAGACAGCAGACTTCGCTAATGGTCAGCTGATATCCGAGAAGCCGATCCAATA
TCTTGGTTTTACCTTCGATGGGCAACAAACGCTGATCCGAGCGTCGTCGCTTGATGCCTACCGTGGCAAGATGCGCCGCG
GTATTCATGCGAAAATGGTTGCCGCGAAAGCGAAAAGCATTCCGTCCATGGAAGTATTCAAGCGCGAGAGCCTCGCGCGA
TACACCCACCTCGGAAAGAGGCGCAACTTCCTGCGCTACGCCTACAAAGCATCAGACATCTTGGGTTGTCCTGAAATCAG
ACAGCAAGTCAGCCATCACGTCACGTGGTTCAACAGAGCGTGGGAGCGTGAATCTGTCCGGGTTTTCGGCGGGCTGGTCA
CTACGCCATAA

Upstream 100 bases:

>100_bases
AACATACCACGCTAGGTTTTCTCGTACCGGAGAGTGCTTTGGCGCTCGATGATGGGAGCTAGGTCAAATAGCCCGGGCAT
TTGAAGAACGGAGTTCATTG

Downstream 100 bases:

>100_bases
CACCTTCATCACTTTTGGTTGGCCAAACGTCCCGCTCTTCTTTGTGGATGTCATGGTCGGTCTGCACAGCAAGTCATCTG
GACCTTTGTCAACTCTGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 456; Mature: 455

Protein sequence:

>456_residues
MPGFYLPTEYEFDPSTDDFILKSMSKARSYKHFDLPLPENRRERTIDFGSEIKPHRFWPLLGFTDLTRRYVRVKDADGNW
LRDDKGKFVRKEKAKPRPIRFAGHEDAAYLQGYAAHLNGFYEYALSADGSSGSVLAYRKGGGTNIHHAKSLFDEIVKRQN
CSVFAMDISGFFDCLDHKLLRDEIAGLLGVSRLQSHHGRVWANITKYAWVETDDLDKLLGRKRNGHGRVCSPQDFKAHVQ
GRKSGLIRRHDRDYGIPQGTPVSGLYANIYLRSFDREMIAMCAKYGGSYRRYSDDIAVVLPLGAKVRHVVAIVEKMLSDF
GLAMSVEKTETADFANGQLISEKPIQYLGFTFDGQQTLIRASSLDAYRGKMRRGIHAKMVAAKAKSIPSMEVFKRESLAR
YTHLGKRRNFLRYAYKASDILGCPEIRQQVSHHVTWFNRAWERESVRVFGGLVTTP

Sequences:

>Translated_456_residues
MPGFYLPTEYEFDPSTDDFILKSMSKARSYKHFDLPLPENRRERTIDFGSEIKPHRFWPLLGFTDLTRRYVRVKDADGNW
LRDDKGKFVRKEKAKPRPIRFAGHEDAAYLQGYAAHLNGFYEYALSADGSSGSVLAYRKGGGTNIHHAKSLFDEIVKRQN
CSVFAMDISGFFDCLDHKLLRDEIAGLLGVSRLQSHHGRVWANITKYAWVETDDLDKLLGRKRNGHGRVCSPQDFKAHVQ
GRKSGLIRRHDRDYGIPQGTPVSGLYANIYLRSFDREMIAMCAKYGGSYRRYSDDIAVVLPLGAKVRHVVAIVEKMLSDF
GLAMSVEKTETADFANGQLISEKPIQYLGFTFDGQQTLIRASSLDAYRGKMRRGIHAKMVAAKAKSIPSMEVFKRESLAR
YTHLGKRRNFLRYAYKASDILGCPEIRQQVSHHVTWFNRAWERESVRVFGGLVTTP
>Mature_455_residues
PGFYLPTEYEFDPSTDDFILKSMSKARSYKHFDLPLPENRRERTIDFGSEIKPHRFWPLLGFTDLTRRYVRVKDADGNWL
RDDKGKFVRKEKAKPRPIRFAGHEDAAYLQGYAAHLNGFYEYALSADGSSGSVLAYRKGGGTNIHHAKSLFDEIVKRQNC
SVFAMDISGFFDCLDHKLLRDEIAGLLGVSRLQSHHGRVWANITKYAWVETDDLDKLLGRKRNGHGRVCSPQDFKAHVQG
RKSGLIRRHDRDYGIPQGTPVSGLYANIYLRSFDREMIAMCAKYGGSYRRYSDDIAVVLPLGAKVRHVVAIVEKMLSDFG
LAMSVEKTETADFANGQLISEKPIQYLGFTFDGQQTLIRASSLDAYRGKMRRGIHAKMVAAKAKSIPSMEVFKRESLARY
THLGKRRNFLRYAYKASDILGCPEIRQQVSHHVTWFNRAWERESVRVFGGLVTTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52022; Mature: 51891

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS50878 RT_POL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGFYLPTEYEFDPSTDDFILKSMSKARSYKHFDLPLPENRRERTIDFGSEIKPHRFWPL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECC
LGFTDLTRRYVRVKDADGNWLRDDKGKFVRKEKAKPRPIRFAGHEDAAYLQGYAAHLNGF
CCHHHHHHHEEEEECCCCCCCCCCCCCHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHH
YEYALSADGSSGSVLAYRKGGGTNIHHAKSLFDEIVKRQNCSVFAMDISGFFDCLDHKLL
HHHEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHH
RDEIAGLLGVSRLQSHHGRVWANITKYAWVETDDLDKLLGRKRNGHGRVCSPQDFKAHVQ
HHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCHHHHHCCCCCCCCCCCCCCCHHHHHC
GRKSGLIRRHDRDYGIPQGTPVSGLYANIYLRSFDREMIAMCAKYGGSYRRYSDDIAVVL
HHHCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEE
PLGAKVRHVVAIVEKMLSDFGLAMSVEKTETADFANGQLISEKPIQYLGFTFDGQQTLIR
ECCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEECCCCHHHEEEEECCHHHHHH
ASSLDAYRGKMRRGIHAKMVAAKAKSIPSMEVFKRESLARYTHLGKRRNFLRYAYKASDI
HHCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LGCPEIRQQVSHHVTWFNRAWERESVRVFGGLVTTP
CCCHHHHHHHHHHHHHHHHHHCCCCEEEECCEECCC
>Mature Secondary Structure 
PGFYLPTEYEFDPSTDDFILKSMSKARSYKHFDLPLPENRRERTIDFGSEIKPHRFWPL
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECC
LGFTDLTRRYVRVKDADGNWLRDDKGKFVRKEKAKPRPIRFAGHEDAAYLQGYAAHLNGF
CCHHHHHHHEEEEECCCCCCCCCCCCCHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHH
YEYALSADGSSGSVLAYRKGGGTNIHHAKSLFDEIVKRQNCSVFAMDISGFFDCLDHKLL
HHHEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHH
RDEIAGLLGVSRLQSHHGRVWANITKYAWVETDDLDKLLGRKRNGHGRVCSPQDFKAHVQ
HHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCHHHHHCCCCCCCCCCCCCCCHHHHHC
GRKSGLIRRHDRDYGIPQGTPVSGLYANIYLRSFDREMIAMCAKYGGSYRRYSDDIAVVL
HHHCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEE
PLGAKVRHVVAIVEKMLSDFGLAMSVEKTETADFANGQLISEKPIQYLGFTFDGQQTLIR
ECCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEECCCCHHHEEEEECCHHHHHH
ASSLDAYRGKMRRGIHAKMVAAKAKSIPSMEVFKRESLARYTHLGKRRNFLRYAYKASDI
HHCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LGCPEIRQQVSHHVTWFNRAWERESVRVFGGLVTTP
CCCHHHHHHHHHHHHHHHHHHCCCCEEEECCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA