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The map label for this gene is 110679501

Identifier: 110679501

GI number: 110679501

Start: 2133684

End: 2134709

Strand: Direct

Name: 110679501

Synonym: RD1_2232

Alternate gene names: NA

Gene position: 2133684-2134709 (Clockwise)

Preceding gene: 110679500

Following gene: 110679502

Centisome position: 51.62

GC content: 50.39

Gene sequence:

>1026_bases
ATGAGAAAAGTAAACGAGGAAAACGAGCGGATAAAGCGAAAATACTTCCAATACCGCAAGACCGCCCAGCGCAAGGATGA
AGCGACCATTGACAAAGATGCGGAGGCGATCCTGCACTTTGAAGCCAGCACCAACTACGCGCCTTTCAAAAAGTTTCGCA
TTGAACAGGCGATCCGCTACCGGGATAAACTGGACATCGAGAAAAACAAGAAGACAGGTAAGCCGCTGGCAAAAGCGACC
ATCGCCAAGCGTTTGGCCAGCATCAAGGCATTCATCTTTTGGCTGGCAGATCAACAGGGATACAAAAGCCGGATACGCTA
CTCTGATGCGGACTATTTCAACATGGACGCAAAAGGACAGCGCGTTGCTAACGCGGTCAGAGAAAGGCCCCATCCCTCTC
TGGAGATGGTTCGCCACGCTTTTAATCAGATGCCTGCAAATACAGAATTAGAGCGACGTAACGCGGCAGTTATCGCGTTT
TTCATGATCTCCGGCGCAAGAGATGGGGCGGCAGCGTCACTTCGGCTCAAGCACATCAATCTTGTGGACGGGTACGTTTT
TCAGGACGCGCGCGAGGTGAAAACGAAAAACTCCAAAACCTTCACGACCTACTTCATGCCTGTTGATCCGATTTACATGG
AGTGTTTTTGCACATGGGTGCAATATCTTCAATCTGAATTGCTCTTTGGCCCCGATGATCCGCTTTTCCCTCCCCCGGAG
ATGGGTCTCAAAGATGGTCAATTTACGGTCGTAGGCTTGAAGCGGGAAACTTATCAAAACGCCAACGCACTCCGGACAGT
GGTAAAACAAGCCTTTGAGAATGCAGGCCTACCGATTTTCGCTCCGCATTCGCTTCGCAAAACACTGACCAAGTGGGCGA
CAGTCCAATATCCCACCCACGAAGCATTCAAAGCATTCTCGCAAAACATCGGGCATTCAAACGTCGCAACGACCCTAAGT
GCGTATTGCCCTGTCAGTACGGAACGACAAGGCGAACTCATCAAAGCACCCAAAATTCCGGCTTAG

Upstream 100 bases:

>100_bases
TTCTTCCAAGTGTTCGGGTTCAAAAGAAAACGCGCCAGAAGAGACTAATAGATACCGGCTCTTACCGTTTGAACAACACA
TCTGAAGGAGATGAACGGAC

Downstream 100 bases:

>100_bases
GCCGTTGTCCATTCCGCGCCCAGCGCCTACGGTAATCAAAAAACAGGGCAAAACATGTTTGAGAACGCTTTCAACAGCAT
AGACAAGGAACTGCGCAACG

Product: phage integrase family protein

Products: NA

Alternate protein names: Integrase; Site-Specific Recombinase Phage Integrase Family Protein; Phage Integrase; Site-Specific Recombinase XerD-Like Protein; Integrase Family Protein

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MRKVNEENERIKRKYFQYRKTAQRKDEATIDKDAEAILHFEASTNYAPFKKFRIEQAIRYRDKLDIEKNKKTGKPLAKAT
IAKRLASIKAFIFWLADQQGYKSRIRYSDADYFNMDAKGQRVANAVRERPHPSLEMVRHAFNQMPANTELERRNAAVIAF
FMISGARDGAAASLRLKHINLVDGYVFQDAREVKTKNSKTFTTYFMPVDPIYMECFCTWVQYLQSELLFGPDDPLFPPPE
MGLKDGQFTVVGLKRETYQNANALRTVVKQAFENAGLPIFAPHSLRKTLTKWATVQYPTHEAFKAFSQNIGHSNVATTLS
AYCPVSTERQGELIKAPKIPA

Sequences:

>Translated_341_residues
MRKVNEENERIKRKYFQYRKTAQRKDEATIDKDAEAILHFEASTNYAPFKKFRIEQAIRYRDKLDIEKNKKTGKPLAKAT
IAKRLASIKAFIFWLADQQGYKSRIRYSDADYFNMDAKGQRVANAVRERPHPSLEMVRHAFNQMPANTELERRNAAVIAF
FMISGARDGAAASLRLKHINLVDGYVFQDAREVKTKNSKTFTTYFMPVDPIYMECFCTWVQYLQSELLFGPDDPLFPPPE
MGLKDGQFTVVGLKRETYQNANALRTVVKQAFENAGLPIFAPHSLRKTLTKWATVQYPTHEAFKAFSQNIGHSNVATTLS
AYCPVSTERQGELIKAPKIPA
>Mature_341_residues
MRKVNEENERIKRKYFQYRKTAQRKDEATIDKDAEAILHFEASTNYAPFKKFRIEQAIRYRDKLDIEKNKKTGKPLAKAT
IAKRLASIKAFIFWLADQQGYKSRIRYSDADYFNMDAKGQRVANAVRERPHPSLEMVRHAFNQMPANTELERRNAAVIAF
FMISGARDGAAASLRLKHINLVDGYVFQDAREVKTKNSKTFTTYFMPVDPIYMECFCTWVQYLQSELLFGPDDPLFPPPE
MGLKDGQFTVVGLKRETYQNANALRTVVKQAFENAGLPIFAPHSLRKTLTKWATVQYPTHEAFKAFSQNIGHSNVATTLS
AYCPVSTERQGELIKAPKIPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39109; Mature: 39109

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKVNEENERIKRKYFQYRKTAQRKDEATIDKDAEAILHFEASTNYAPFKKFRIEQAIRY
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH
RDKLDIEKNKKTGKPLAKATIAKRLASIKAFIFWLADQQGYKSRIRYSDADYFNMDAKGQ
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCEECCCCCHH
RVANAVRERPHPSLEMVRHAFNQMPANTELERRNAAVIAFFMISGARDGAAASLRLKHIN
HHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHCCCEEEEEEEEECCCCCCCCEEEEEEEE
LVDGYVFQDAREVKTKNSKTFTTYFMPVDPIYMECFCTWVQYLQSELLFGPDDPLFPPPE
HHCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
MGLKDGQFTVVGLKRETYQNANALRTVVKQAFENAGLPIFAPHSLRKTLTKWATVQYPTH
CCCCCCCEEEEEECHHHHCCHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHEECCCCH
EAFKAFSQNIGHSNVATTLSAYCPVSTERQGELIKAPKIPA
HHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCC
>Mature Secondary Structure
MRKVNEENERIKRKYFQYRKTAQRKDEATIDKDAEAILHFEASTNYAPFKKFRIEQAIRY
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH
RDKLDIEKNKKTGKPLAKATIAKRLASIKAFIFWLADQQGYKSRIRYSDADYFNMDAKGQ
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCEECCCCCHH
RVANAVRERPHPSLEMVRHAFNQMPANTELERRNAAVIAFFMISGARDGAAASLRLKHIN
HHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHCCCEEEEEEEEECCCCCCCCEEEEEEEE
LVDGYVFQDAREVKTKNSKTFTTYFMPVDPIYMECFCTWVQYLQSELLFGPDDPLFPPPE
HHCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
MGLKDGQFTVVGLKRETYQNANALRTVVKQAFENAGLPIFAPHSLRKTLTKWATVQYPTH
CCCCCCCEEEEEECHHHHCCHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHEECCCCH
EAFKAFSQNIGHSNVATTLSAYCPVSTERQGELIKAPKIPA
HHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA