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The map label for this gene is 110679475

Identifier: 110679475

GI number: 110679475

Start: 2100695

End: 2101672

Strand: Reverse

Name: 110679475

Synonym: RD1_2202

Alternate gene names: NA

Gene position: 2101672-2100695 (Counterclockwise)

Preceding gene: 110679477

Following gene: 110679474

Centisome position: 50.85

GC content: 58.28

Gene sequence:

>978_bases
ATGACTAACAGATTTACACGGCGTATCGCGCTCGCCATGGCAGCCACCGCGGCGCTGATGACGGCAGCCCCCGCCATCGC
TGGCGACTGGAAGCCGCAAAAACCGGTCGAGATGGTCATCATGGCCGGTCAGGGTGGTGGTGCGGACCGTCTGGCGCGTC
TGTTCCAGTCGATCATCCAAAAGGAAAACCTTGCCTCCATGCCGATCCTGCCGGTGAACAAGGGCGGCGGGTCCGGCGCT
GAAGCGCTGCGCTATCTCAAGGACAAAGAAGGCGACAACCATGTCATCATGGCGACGCTCAACAGCTATTACACAACCCC
CCTGCGCACGGACATCGGTGTCGATATCGAAGAGTTCACGCCAGTGGCGCGTATGGCGCTCGACACATTCGTGCTCTGGG
TAAACGCCGACAGCGACATCAAAACGCTGGATGACTATGTGGCTGCGGTCAAGGACGCGGGTGGCACATGGAAAATGGGC
GGCACCGGCACAGGCCAGGAAGACAGCCTCGTCACGGCGATGCTTGAGAAGGAATTCGGGATCGAAGTCACATACGTGCC
CTTCAAAGGTGGCGGCGATGTTGCCAAGAACCTTGTCGGTGGGCACATCGACAGTTCCGTGAACAACCCCTCCGAAGCGC
TCGGTTTTTACAATGCGGGCAAGGTACGCCCCATCGCGGCCTTCACGCCCGAGCGGATTTCGGTCTTTCCCGACACGCCC
ACCATGGGAGAGTTGGGCCATGATCTGGTCTATTGGATGCAGCGTTCCTTCGTAGCTCCCAAAGGCATGGATCCGGCAGC
GGTTGCTTATTACACAAAGATGTTTGAAAACCTCGCCGCCTCGGAAGAGTGGCAGACATACACGCAGGAAAAAGCCCTGA
TGGCGGACTTCCTGACCGGTGATGAGCTGCAGGCCTATTTCATCGAAGAGCGTGCAAAACATGCCGACCTGCTGAGCTCC
ATGAACGAAGGTTCCTAA

Upstream 100 bases:

>100_bases
TCGCGGGTCTATGTAGCTTCGTCAGGTAAGGTACGCGACAGCCTTTCTCAACGCTTTCATAAGGGGTGCATGCCCCGTTT
GGTCTTAGGGAGGACACTAC

Downstream 100 bases:

>100_bases
TTCGATTATCCTCGGACACGAGCCGGAAGGGGGCGCGCAGGTGCCCCCTTTTCCTACCCTTCTGAAATGCAAAGAGATAC
CTCATGTTAATGGCTGACAG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF7 [H]

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MTNRFTRRIALAMAATAALMTAAPAIAGDWKPQKPVEMVIMAGQGGGADRLARLFQSIIQKENLASMPILPVNKGGGSGA
EALRYLKDKEGDNHVIMATLNSYYTTPLRTDIGVDIEEFTPVARMALDTFVLWVNADSDIKTLDDYVAAVKDAGGTWKMG
GTGTGQEDSLVTAMLEKEFGIEVTYVPFKGGGDVAKNLVGGHIDSSVNNPSEALGFYNAGKVRPIAAFTPERISVFPDTP
TMGELGHDLVYWMQRSFVAPKGMDPAAVAYYTKMFENLAASEEWQTYTQEKALMADFLTGDELQAYFIEERAKHADLLSS
MNEGS

Sequences:

>Translated_325_residues
MTNRFTRRIALAMAATAALMTAAPAIAGDWKPQKPVEMVIMAGQGGGADRLARLFQSIIQKENLASMPILPVNKGGGSGA
EALRYLKDKEGDNHVIMATLNSYYTTPLRTDIGVDIEEFTPVARMALDTFVLWVNADSDIKTLDDYVAAVKDAGGTWKMG
GTGTGQEDSLVTAMLEKEFGIEVTYVPFKGGGDVAKNLVGGHIDSSVNNPSEALGFYNAGKVRPIAAFTPERISVFPDTP
TMGELGHDLVYWMQRSFVAPKGMDPAAVAYYTKMFENLAASEEWQTYTQEKALMADFLTGDELQAYFIEERAKHADLLSS
MNEGS
>Mature_324_residues
TNRFTRRIALAMAATAALMTAAPAIAGDWKPQKPVEMVIMAGQGGGADRLARLFQSIIQKENLASMPILPVNKGGGSGAE
ALRYLKDKEGDNHVIMATLNSYYTTPLRTDIGVDIEEFTPVARMALDTFVLWVNADSDIKTLDDYVAAVKDAGGTWKMGG
TGTGQEDSLVTAMLEKEFGIEVTYVPFKGGGDVAKNLVGGHIDSSVNNPSEALGFYNAGKVRPIAAFTPERISVFPDTPT
MGELGHDLVYWMQRSFVAPKGMDPAAVAYYTKMFENLAASEEWQTYTQEKALMADFLTGDELQAYFIEERAKHADLLSSM
NEGS

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064
- InterPro:   IPR006311 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 35260; Mature: 35129

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNRFTRRIALAMAATAALMTAAPAIAGDWKPQKPVEMVIMAGQGGGADRLARLFQSIIQ
CCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHH
KENLASMPILPVNKGGGSGAEALRYLKDKEGDNHVIMATLNSYYTTPLRTDIGVDIEEFT
HCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEECCEECCCCCCCCCCCHHHHH
PVARMALDTFVLWVNADSDIKTLDDYVAAVKDAGGTWKMGGTGTGQEDSLVTAMLEKEFG
HHHHHHHHHEEEEEECCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHC
IEVTYVPFKGGGDVAKNLVGGHIDSSVNNPSEALGFYNAGKVRPIAAFTPERISVFPDTP
CEEEEEEECCCHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCCCEEECCCCC
TMGELGHDLVYWMQRSFVAPKGMDPAAVAYYTKMFENLAASEEWQTYTQEKALMADFLTG
CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
DELQAYFIEERAKHADLLSSMNEGS
CHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TNRFTRRIALAMAATAALMTAAPAIAGDWKPQKPVEMVIMAGQGGGADRLARLFQSIIQ
CCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHH
KENLASMPILPVNKGGGSGAEALRYLKDKEGDNHVIMATLNSYYTTPLRTDIGVDIEEFT
HCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEECCEECCCCCCCCCCCHHHHH
PVARMALDTFVLWVNADSDIKTLDDYVAAVKDAGGTWKMGGTGTGQEDSLVTAMLEKEFG
HHHHHHHHHEEEEEECCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHC
IEVTYVPFKGGGDVAKNLVGGHIDSSVNNPSEALGFYNAGKVRPIAAFTPERISVFPDTP
CEEEEEEECCCHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCCCEEECCCCC
TMGELGHDLVYWMQRSFVAPKGMDPAAVAYYTKMFENLAASEEWQTYTQEKALMADFLTG
CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
DELQAYFIEERAKHADLLSSMNEGS
CHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7851418 [H]