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The map label for this gene is 110679473

Identifier: 110679473

GI number: 110679473

Start: 2098599

End: 2100107

Strand: Reverse

Name: 110679473

Synonym: RD1_2200

Alternate gene names: NA

Gene position: 2100107-2098599 (Counterclockwise)

Preceding gene: 110679474

Following gene: 110679472

Centisome position: 50.81

GC content: 59.38

Gene sequence:

>1509_bases
ATGGAACTCATCGGTCATCTGGCGGACGGCTTTGCCACGTCCCTCTCGCCGCTCAACCTCTTTATCGTGATCATCGGCGT
CACAGCCGGGCTTTTCATCGGCGCTATGCCGGGTCTTGGCTCGGTCAATGGTGTGGCCATTGTGCTGCCCATGACGTTTA
TCGTGCCGCCCTCCTCGGCCATCATCCTGCTGTGCGCCATCTATTATGGCGCCATGTATGGCGGCGCGATCAGTTCGATC
CTGCTGGGCATCCCGGGCGCTTCCACGGCCGTGGCGACAACATTTGATGGACGACCCATGGCGCAACAGGGCCGCGCGGG
TCTGGCGCTGATTGCGGCGGCTGTTGCTTCCTTTGTGGGCGGTACGATCTCGGTGATCCTGTTCACGCTGTTTGCCGCCC
CTTTGGCCGATGTGGCGCTCGCCTTCGGCCCTGCTGAGGAGTTCGCGCTGGTCCTGCTTGCCTTCACCACATTCGTGGGC
CTCGGTGGGGATGACATCCTGAAGACCATCATCATGATCTGTCTCGGTCTTGCGCTTTCCACTGTTGGGCTGGATCTGAT
CTCCGGTGATCCAAGGCTGATTTTCTTTGACCAGCCGGGCTTTTACTCAGGCGTCAGCTTTCTGGTGCTGGCTATCGGCA
TCTATGGCGTCGGCGAAATTCTCTATACCATCGAAACATCAAAATCCGCCCCCTCCGTCACGCCGGCAAGACTGACGTTC
CGCGATCTGTGGTTTGGCATCAAAGAGGTAGGCAAACTCTGGAAAACCCTCGGTTTTGGCTCTTCCATGGGCTTCTTCGT
CGGCATGCTGCCCGCCGCCGGGGCCACGCCTGCCGCGCTGATGTCCTATGGTCTGTCCAAACTGATGTCCAAACAACCAG
AGACCTTTGGCAAGGGCAATATCGAGGGCGTCGCCTCGCCTGAAACGGCCAACAACGCCGCCTCGACCGGATCGCTGCTG
CCGATGCTGACCCTGGGGATTCCCGGCTCTCCGACCACGGCCTTGTTGCTGGGCGGGATGGTCATGTGGGGGCTTGTGCC
CGGGCCGATGTTGTTCATCGAACAGCCCGATTTCGTCTGGGGTCTGATTTCCTCGCTGTACACGGCGAACCTTGCCGCGG
TGCTGGTCAACCTCGCGCTGATCCCGGTCTTTGTCTGGGCGCTGAGGATGCCGTTCACTGTTTTGTGCACGCTTGTTCTG
GTGCTCTGCATCGTCGGGGGATTTGCGCCGAGCCAGAAAATGCATGACGTCTGGCTGATCATCGGCTTTGGCGTTGCGGG
GTATCTGTTGCGCAAGGCGGAATACCCGATGGCACCGCTGGTGCTGGCCCTCGTGCTGGGTCCGCTGATGGAAAAGAGCT
TCCGTCAAACCCTCATCTCGGAGCAGGGCAACATGATGGCCTTTATCGAACGGCCCTTGTCTGGCACCTTTATCGCCATC
AGTGTGGTGTTCTTCTTGCTGCCCTTGCTCAAGTACGTCAAAAAGGCGAACCGTGCGCAAAAGGCTTGA

Upstream 100 bases:

>100_bases
CTTTTTCTTCGAAGTCACTCTGAAGATCCTGTTGCCCAAGGGCCTGACAGAGCCACTCTTTTTCCCGCTCTACGCGATGT
TCTTCTAGGAAAGCAGAACC

Downstream 100 bases:

>100_bases
TCGGAGCCGGAAGTCAAATAAACCAAGGATTATTACGATGCATACAACAGTGTCTGGTTTCATCGCCGCTCATGCAGATG
ACGCGCCCGCGCTTGGATCG

Product: integral membrane protein, putative

Products: NA

Alternate protein names: ORFZ2 [H]

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MELIGHLADGFATSLSPLNLFIVIIGVTAGLFIGAMPGLGSVNGVAIVLPMTFIVPPSSAIILLCAIYYGAMYGGAISSI
LLGIPGASTAVATTFDGRPMAQQGRAGLALIAAAVASFVGGTISVILFTLFAAPLADVALAFGPAEEFALVLLAFTTFVG
LGGDDILKTIIMICLGLALSTVGLDLISGDPRLIFFDQPGFYSGVSFLVLAIGIYGVGEILYTIETSKSAPSVTPARLTF
RDLWFGIKEVGKLWKTLGFGSSMGFFVGMLPAAGATPAALMSYGLSKLMSKQPETFGKGNIEGVASPETANNAASTGSLL
PMLTLGIPGSPTTALLLGGMVMWGLVPGPMLFIEQPDFVWGLISSLYTANLAAVLVNLALIPVFVWALRMPFTVLCTLVL
VLCIVGGFAPSQKMHDVWLIIGFGVAGYLLRKAEYPMAPLVLALVLGPLMEKSFRQTLISEQGNMMAFIERPLSGTFIAI
SVVFFLLPLLKYVKKANRAQKA

Sequences:

>Translated_502_residues
MELIGHLADGFATSLSPLNLFIVIIGVTAGLFIGAMPGLGSVNGVAIVLPMTFIVPPSSAIILLCAIYYGAMYGGAISSI
LLGIPGASTAVATTFDGRPMAQQGRAGLALIAAAVASFVGGTISVILFTLFAAPLADVALAFGPAEEFALVLLAFTTFVG
LGGDDILKTIIMICLGLALSTVGLDLISGDPRLIFFDQPGFYSGVSFLVLAIGIYGVGEILYTIETSKSAPSVTPARLTF
RDLWFGIKEVGKLWKTLGFGSSMGFFVGMLPAAGATPAALMSYGLSKLMSKQPETFGKGNIEGVASPETANNAASTGSLL
PMLTLGIPGSPTTALLLGGMVMWGLVPGPMLFIEQPDFVWGLISSLYTANLAAVLVNLALIPVFVWALRMPFTVLCTLVL
VLCIVGGFAPSQKMHDVWLIIGFGVAGYLLRKAEYPMAPLVLALVLGPLMEKSFRQTLISEQGNMMAFIERPLSGTFIAI
SVVFFLLPLLKYVKKANRAQKA
>Mature_502_residues
MELIGHLADGFATSLSPLNLFIVIIGVTAGLFIGAMPGLGSVNGVAIVLPMTFIVPPSSAIILLCAIYYGAMYGGAISSI
LLGIPGASTAVATTFDGRPMAQQGRAGLALIAAAVASFVGGTISVILFTLFAAPLADVALAFGPAEEFALVLLAFTTFVG
LGGDDILKTIIMICLGLALSTVGLDLISGDPRLIFFDQPGFYSGVSFLVLAIGIYGVGEILYTIETSKSAPSVTPARLTF
RDLWFGIKEVGKLWKTLGFGSSMGFFVGMLPAAGATPAALMSYGLSKLMSKQPETFGKGNIEGVASPETANNAASTGSLL
PMLTLGIPGSPTTALLLGGMVMWGLVPGPMLFIEQPDFVWGLISSLYTANLAAVLVNLALIPVFVWALRMPFTVLCTLVL
VLCIVGGFAPSQKMHDVWLIIGFGVAGYLLRKAEYPMAPLVLALVLGPLMEKSFRQTLISEQGNMMAFIERPLSGTFIAI
SVVFFLLPLLKYVKKANRAQKA

Specific function: Unknown

COG id: COG3333

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002823 [H]

Pfam domain/function: PF01970 DUF112 [H]

EC number: NA

Molecular weight: Translated: 52538; Mature: 52538

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELIGHLADGFATSLSPLNLFIVIIGVTAGLFIGAMPGLGSVNGVAIVLPMTFIVPPSSA
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHEEECCCHH
IILLCAIYYGAMYGGAISSILLGIPGASTAVATTFDGRPMAQQGRAGLALIAAAVASFVG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHCCCHHHHHHHHHHHHHC
GTISVILFTLFAAPLADVALAFGPAEEFALVLLAFTTFVGLGGDDILKTIIMICLGLALS
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
TVGLDLISGDPRLIFFDQPGFYSGVSFLVLAIGIYGVGEILYTIETSKSAPSVTPARLTF
HHHHHEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHH
RDLWFGIKEVGKLWKTLGFGSSMGFFVGMLPAAGATPAALMSYGLSKLMSKQPETFGKGN
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
IEGVASPETANNAASTGSLLPMLTLGIPGSPTTALLLGGMVMWGLVPGPMLFIEQPDFVW
CCCCCCCCCCCCCCCCCCHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHH
GLISSLYTANLAAVLVNLALIPVFVWALRMPFTVLCTLVLVLCIVGGFAPSQKMHDVWLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHEE
IGFGVAGYLLRKAEYPMAPLVLALVLGPLMEKSFRQTLISEQGNMMAFIERPLSGTFIAI
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHH
SVVFFLLPLLKYVKKANRAQKA
HHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MELIGHLADGFATSLSPLNLFIVIIGVTAGLFIGAMPGLGSVNGVAIVLPMTFIVPPSSA
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHEEECCCHH
IILLCAIYYGAMYGGAISSILLGIPGASTAVATTFDGRPMAQQGRAGLALIAAAVASFVG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHCCCHHHHHHHHHHHHHC
GTISVILFTLFAAPLADVALAFGPAEEFALVLLAFTTFVGLGGDDILKTIIMICLGLALS
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
TVGLDLISGDPRLIFFDQPGFYSGVSFLVLAIGIYGVGEILYTIETSKSAPSVTPARLTF
HHHHHEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHH
RDLWFGIKEVGKLWKTLGFGSSMGFFVGMLPAAGATPAALMSYGLSKLMSKQPETFGKGN
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
IEGVASPETANNAASTGSLLPMLTLGIPGSPTTALLLGGMVMWGLVPGPMLFIEQPDFVW
CCCCCCCCCCCCCCCCCCHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHH
GLISSLYTANLAAVLVNLALIPVFVWALRMPFTVLCTLVLVLCIVGGFAPSQKMHDVWLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHEE
IGFGVAGYLLRKAEYPMAPLVLALVLGPLMEKSFRQTLISEQGNMMAFIERPLSGTFIAI
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHH
SVVFFLLPLLKYVKKANRAQKA
HHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8672817 [H]