Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is artJ [C]

Identifier: 110679456

GI number: 110679456

Start: 2080294

End: 2081103

Strand: Direct

Name: artJ [C]

Synonym: RD1_2182

Alternate gene names: 110679456

Gene position: 2080294-2081103 (Clockwise)

Preceding gene: 110679452

Following gene: 110679457

Centisome position: 50.33

GC content: 58.4

Gene sequence:

>810_bases
ATGCACAAGGTCCTGGCCATTTCCATTATTGCGTCAATGATTGCAGTCGGTGGCGCGCAGGCGCAAAGCTGCCACGAGGG
CAAGACGATCAGTGCGGGCAAGCTGACCATCGCCACCGGCAACCCGGCCTATTACCCTTGGGTGCTGGATGATGCGCCGG
AAAGCGGGCAGGGCTTTGAGGCGGCTGTGGCCTATGCGCTGGCGGGCAAAATGGGGTTCATGCAGGAAGATGTGATCTGG
ACCCGCACGTCCTTTGATCAGGCGATCCAGCCGGGTGCAAAGGATTTCGATCTGAACATGCAGCAGTTTTCCATCACCGC
GCAGCGGGATAAAGTCGTCGATTTCTCAGCACCTTACTACACCGCACCCATGGCTGTGCTGGTGCGGGGCGGGGACGGGT
TGACCGCTGACATGGCAACGTTGAAACGGTTGAAATGGGGTGTTGTTGCGACCACGACCGCGCTGCCGGTGGTGATGGAG
AAGATCGCGCCCGAAAGCCCTCCGCTGATTTATGACGACAACGTCAATGTGGTCGAGGCCATGAAAGCGGGTCAGATAGA
TGCAGCACTCTTTGATCTGCCCACCGCGCTTTATCTGGGGGCGGTGGTGCTGGAGGGCGGGCAGGTGCTGGGCCAGTTTA
CCGCCGATGAAACCAAGAACCCTGATCATTTCGGCGCGCTTATGACTGAAGGCAATCCGCTGAAGGAATGTGTTGATGCG
GCACTTACGGAGATGAAAGCTGATGGCAGCCTTGCCGCTATCGAGGCGCAATGGTTGCAGGAAGCAACCGGTGTGCCACT
GATCCAGTGA

Upstream 100 bases:

>100_bases
TTCCGACGTCGGCCCCGCCGTCATGTCTTGCCCCTTGCGCGAAACACTCCGGGTCGCAATAAAAGTGCCAAACAGCACAA
CCAAATGGGGAGAAGTCGAA

Downstream 100 bases:

>100_bases
GCCGGTGGTGAACCGCAGGCAGGCATATGAAGCGCAGCAGCGGCGCAGGTCGCTGAGCATTGCGGGCATCAGCACGGCGC
TGGTCTTGGCTGCCGTGGTC

Product: amino acid ABC transporter, periplasmic-binding protein, putative

Products: ADP; phosphate; L-arginine [Cytoplasm] [C]

Alternate protein names: Cystine Transporter Subunit; Amino Acid ABC Transporter Membrane Protein; Polar Amino Acid ABC Transporter Inner Membrane Subunit; Amino Acid ABC Transporter Periplasmic Protein

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MHKVLAISIIASMIAVGGAQAQSCHEGKTISAGKLTIATGNPAYYPWVLDDAPESGQGFEAAVAYALAGKMGFMQEDVIW
TRTSFDQAIQPGAKDFDLNMQQFSITAQRDKVVDFSAPYYTAPMAVLVRGGDGLTADMATLKRLKWGVVATTTALPVVME
KIAPESPPLIYDDNVNVVEAMKAGQIDAALFDLPTALYLGAVVLEGGQVLGQFTADETKNPDHFGALMTEGNPLKECVDA
ALTEMKADGSLAAIEAQWLQEATGVPLIQ

Sequences:

>Translated_269_residues
MHKVLAISIIASMIAVGGAQAQSCHEGKTISAGKLTIATGNPAYYPWVLDDAPESGQGFEAAVAYALAGKMGFMQEDVIW
TRTSFDQAIQPGAKDFDLNMQQFSITAQRDKVVDFSAPYYTAPMAVLVRGGDGLTADMATLKRLKWGVVATTTALPVVME
KIAPESPPLIYDDNVNVVEAMKAGQIDAALFDLPTALYLGAVVLEGGQVLGQFTADETKNPDHFGALMTEGNPLKECVDA
ALTEMKADGSLAAIEAQWLQEATGVPLIQ
>Mature_269_residues
MHKVLAISIIASMIAVGGAQAQSCHEGKTISAGKLTIATGNPAYYPWVLDDAPESGQGFEAAVAYALAGKMGFMQEDVIW
TRTSFDQAIQPGAKDFDLNMQQFSITAQRDKVVDFSAPYYTAPMAVLVRGGDGLTADMATLKRLKWGVVATTTALPVVME
KIAPESPPLIYDDNVNVVEAMKAGQIDAALFDLPTALYLGAVVLEGGQVLGQFTADETKNPDHFGALMTEGNPLKECVDA
ALTEMKADGSLAAIEAQWLQEATGVPLIQ

Specific function: Binds Arginine; Part Of The Arginine Periplasmic Transport System. [C]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787085, Length=211, Percent_Identity=28.9099526066351, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28542; Mature: 28542

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKVLAISIIASMIAVGGAQAQSCHEGKTISAGKLTIATGNPAYYPWVLDDAPESGQGFE
CCHHHHHHHHHHHHHHCCCCHHHHCCCCEECCCEEEEEECCCEEECEEECCCCCCCCCHH
AAVAYALAGKMGFMQEDVIWTRTSFDQAIQPGAKDFDLNMQQFSITAQRDKVVDFSAPYY
HHHHHHHHHHCCCCCCCEEEEECCHHHHHCCCCCCCCCCHHHEEEEECCCCEEECCCCCH
TAPMAVLVRGGDGLTADMATLKRLKWGVVATTTALPVVMEKIAPESPPLIYDDNVNVVEA
HCCEEEEEECCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHCCCCCCEEECCCCCHHHH
MKAGQIDAALFDLPTALYLGAVVLEGGQVLGQFTADETKNPDHFGALMTEGNPLKECVDA
HHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHEEEECCCCHHHHHHHH
ALTEMKADGSLAAIEAQWLQEATGVPLIQ
HHHHHCCCCCEEEHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MHKVLAISIIASMIAVGGAQAQSCHEGKTISAGKLTIATGNPAYYPWVLDDAPESGQGFE
CCHHHHHHHHHHHHHHCCCCHHHHCCCCEECCCEEEEEECCCEEECEEECCCCCCCCCHH
AAVAYALAGKMGFMQEDVIWTRTSFDQAIQPGAKDFDLNMQQFSITAQRDKVVDFSAPYY
HHHHHHHHHHCCCCCCCEEEEECCHHHHHCCCCCCCCCCHHHEEEEECCCCEEECCCCCH
TAPMAVLVRGGDGLTADMATLKRLKWGVVATTTALPVVMEKIAPESPPLIYDDNVNVVEA
HCCEEEEEECCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHCCCCCCEEECCCCCHHHH
MKAGQIDAALFDLPTALYLGAVVLEGGQVLGQFTADETKNPDHFGALMTEGNPLKECVDA
HHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHEEEECCCCHHHHHHHH
ALTEMKADGSLAAIEAQWLQEATGVPLIQ
HHHHHCCCCCEEEHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-arginine [Periplasm]; H2O [C]

Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA