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The map label for this gene is amiC [H]

Identifier: 110679440

GI number: 110679440

Start: 2065347

End: 2066690

Strand: Reverse

Name: amiC [H]

Synonym: RD1_2166

Alternate gene names: 110679440

Gene position: 2066690-2065347 (Counterclockwise)

Preceding gene: 110679441

Following gene: 110679439

Centisome position: 50.0

GC content: 56.99

Gene sequence:

>1344_bases
GTGAGTGGGATATGGGGAAGGTTAAGAGACTTCGCAAGCCCACCGCGCATCGTAAGAGAGGAATTTACGATGTCACGAAA
AATGCTTGGCGCGACAACCGCCCTTGTTTTGGCGGGAACGCTGCCCGCTCTGGCGGATTGTCCGATCAAGGTTGGCGTGC
TGCACTCGCTGTCCGGAACCATGGCAATCTCCGAAACGACGCTGAAAGATACGATGGAGATGCTTGTCGAACAGCAGAAT
GCGGCGGGCGGCGTTTTGGGCTGTCAGCTTGAAGCGGTTGTTGTGGATCCCGCATCCGACTGGCCGCTCTTTGCCGAGAA
AGCGCGCGAGTTGCTGACGGTACACGAAGTTGATGTGATCTTTGGCAACTGGACGTCCGTGTCGCGCAAATCCGTGCTGC
CCGTGATCGAGGAACTGAACGGGCTGCTGTTCTATCCCGTCCAGTATGAGGGCGAGGAAAGCTCCAGAAACGTATTCTAC
ACCGGTGCTGCACCCAACCAGCAGGCGATCCCGGCCACGGATTACTTCCTCGAAGAGCTTGGCGTTGAAAAATTCGCGCT
GCTCGGAACGGATTATGTCTATCCACGCACGACCAATAATATCCTCGAATCCTACCTGCAGCACAAAGGCATCCCGACCG
AAGACATCTTTGTGAACTATACGCCTTTTGGTCACTCTGACTGGTCAAAGATCGTCGCTGACGTGGTGGCGCTGGGGGCC
GATGGTAAAAAGGTCGGTGTGATCTCCACCATCAATGGTGATGCGAATGTGGGCTTTTACAAGGAACTCGCGGCGGCGGG
CATCTCGGCAGATGACATTCCTGTCGTTGCCTTTTCCGTCGGCGAAGAAGAGCTTGCGGGTCTCGACACGTCGAACCTCG
TGGGGCACCTGGCCGCATGGAACTACTTCCAGTCGGCAGACTCCGAGGCAAACGACGCATGGGTCGCGGCCTGGAAAGCC
CGCATGGGCGAGGAGCGTGTGACCAATGACCCGATGGAAGCCCATTACATCGGTTTCAACATGTGGGTAAACGCCGCGAC
ACAAGCGGGTTCGACCGAGGTCGATGCCGTGCGCGCTGCGATGTACGGGCAGGAATTTCCGAACCTGACCGGCGGCACGG
CAGTGATGTTGCCCAACCACCACCTCGCCAAACCGGTATTGATCGGGGAAATCCAGGCCGATGGTCAATTCGACATCATC
TCGCAGACAGAAGAGGTGCCGGGCGATGCCTGGACCGATTTCCTGCCGGAATCGGCGGTGCTGAAGTCGGATTGGCAAGA
ACTGGGCTGCGGTATGTTTAACACCGAGACCAATTCCTGCGTGCAGATCAAATCCAACTACTGA

Upstream 100 bases:

>100_bases
TAATGGACATAGCCTCCGGAGTGACTGAACAGGTCATTCAGAACCGTGCGACGGCACCGGCCTACGAACCCAAGCGCCGC
CGCACGCCGCAATAAATTGC

Downstream 100 bases:

>100_bases
TCCGCCCTGAACGCTGAACCGGGCGCGTGCCGGACGCTGGCACGCGCCGCCTTCCAGATCCGAAGGATTCTCCCATGATT
TCTGTCGTCCTGCGGTGCTG

Product: ABC transporter, substrate-binding protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MSGIWGRLRDFASPPRIVREEFTMSRKMLGATTALVLAGTLPALADCPIKVGVLHSLSGTMAISETTLKDTMEMLVEQQN
AAGGVLGCQLEAVVVDPASDWPLFAEKARELLTVHEVDVIFGNWTSVSRKSVLPVIEELNGLLFYPVQYEGEESSRNVFY
TGAAPNQQAIPATDYFLEELGVEKFALLGTDYVYPRTTNNILESYLQHKGIPTEDIFVNYTPFGHSDWSKIVADVVALGA
DGKKVGVISTINGDANVGFYKELAAAGISADDIPVVAFSVGEEELAGLDTSNLVGHLAAWNYFQSADSEANDAWVAAWKA
RMGEERVTNDPMEAHYIGFNMWVNAATQAGSTEVDAVRAAMYGQEFPNLTGGTAVMLPNHHLAKPVLIGEIQADGQFDII
SQTEEVPGDAWTDFLPESAVLKSDWQELGCGMFNTETNSCVQIKSNY

Sequences:

>Translated_447_residues
MSGIWGRLRDFASPPRIVREEFTMSRKMLGATTALVLAGTLPALADCPIKVGVLHSLSGTMAISETTLKDTMEMLVEQQN
AAGGVLGCQLEAVVVDPASDWPLFAEKARELLTVHEVDVIFGNWTSVSRKSVLPVIEELNGLLFYPVQYEGEESSRNVFY
TGAAPNQQAIPATDYFLEELGVEKFALLGTDYVYPRTTNNILESYLQHKGIPTEDIFVNYTPFGHSDWSKIVADVVALGA
DGKKVGVISTINGDANVGFYKELAAAGISADDIPVVAFSVGEEELAGLDTSNLVGHLAAWNYFQSADSEANDAWVAAWKA
RMGEERVTNDPMEAHYIGFNMWVNAATQAGSTEVDAVRAAMYGQEFPNLTGGTAVMLPNHHLAKPVLIGEIQADGQFDII
SQTEEVPGDAWTDFLPESAVLKSDWQELGCGMFNTETNSCVQIKSNY
>Mature_446_residues
SGIWGRLRDFASPPRIVREEFTMSRKMLGATTALVLAGTLPALADCPIKVGVLHSLSGTMAISETTLKDTMEMLVEQQNA
AGGVLGCQLEAVVVDPASDWPLFAEKARELLTVHEVDVIFGNWTSVSRKSVLPVIEELNGLLFYPVQYEGEESSRNVFYT
GAAPNQQAIPATDYFLEELGVEKFALLGTDYVYPRTTNNILESYLQHKGIPTEDIFVNYTPFGHSDWSKIVADVVALGAD
GKKVGVISTINGDANVGFYKELAAAGISADDIPVVAFSVGEEELAGLDTSNLVGHLAAWNYFQSADSEANDAWVAAWKAR
MGEERVTNDPMEAHYIGFNMWVNAATQAGSTEVDAVRAAMYGQEFPNLTGGTAVMLPNHHLAKPVLIGEIQADGQFDIIS
QTEEVPGDAWTDFLPESAVLKSDWQELGCGMFNTETNSCVQIKSNY

Specific function: Negatively regulates the expression of the aliphatic amidase operon. AmiC functions by inhibiting the action of AmiR at the protein level. It exhibits protein kinase activity [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000709 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48535; Mature: 48404

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGIWGRLRDFASPPRIVREEFTMSRKMLGATTALVLAGTLPALADCPIKVGVLHSLSGT
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEHHCCCCC
MAISETTLKDTMEMLVEQQNAAGGVLGCQLEAVVVDPASDWPLFAEKARELLTVHEVDVI
EEECHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHEEEEEE
FGNWTSVSRKSVLPVIEELNGLLFYPVQYEGEESSRNVFYTGAAPNQQAIPATDYFLEEL
EECCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHH
GVEKFALLGTDYVYPRTTNNILESYLQHKGIPTEDIFVNYTPFGHSDWSKIVADVVALGA
CCHHEEEECCCEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCC
DGKKVGVISTINGDANVGFYKELAAAGISADDIPVVAFSVGEEELAGLDTSNLVGHLAAW
CCCEEEEEEEECCCCCCCHHHHHHHCCCCCCCCCEEEEECCHHHHHCCCHHHHHHHHHHH
NYFQSADSEANDAWVAAWKARMGEERVTNDPMEAHYIGFNMWVNAATQAGSTEVDAVRAA
HHHHCCCCCCCCHHHHHHHHHCCCHHCCCCCCCEEEEEEEEEEEHHCCCCCCHHHHHHHH
MYGQEFPNLTGGTAVMLPNHHLAKPVLIGEIQADGQFDIISQTEEVPGDAWTDFLPESAV
HHHHCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCEEEECCCCCCCCCHHHHHCCCHHH
LKSDWQELGCGMFNTETNSCVQIKSNY
HHHHHHHHCCCEECCCCCCEEEEECCC
>Mature Secondary Structure 
SGIWGRLRDFASPPRIVREEFTMSRKMLGATTALVLAGTLPALADCPIKVGVLHSLSGT
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEHHCCCCC
MAISETTLKDTMEMLVEQQNAAGGVLGCQLEAVVVDPASDWPLFAEKARELLTVHEVDVI
EEECHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHEEEEEE
FGNWTSVSRKSVLPVIEELNGLLFYPVQYEGEESSRNVFYTGAAPNQQAIPATDYFLEEL
EECCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHH
GVEKFALLGTDYVYPRTTNNILESYLQHKGIPTEDIFVNYTPFGHSDWSKIVADVVALGA
CCHHEEEECCCEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCC
DGKKVGVISTINGDANVGFYKELAAAGISADDIPVVAFSVGEEELAGLDTSNLVGHLAAW
CCCEEEEEEEECCCCCCCHHHHHHHCCCCCCCCCEEEEECCHHHHHCCCHHHHHHHHHHH
NYFQSADSEANDAWVAAWKARMGEERVTNDPMEAHYIGFNMWVNAATQAGSTEVDAVRAA
HHHHCCCCCCCCHHHHHHHHHCCCHHCCCCCCCEEEEEEEEEEEHHCCCCCCHHHHHHHH
MYGQEFPNLTGGTAVMLPNHHLAKPVLIGEIQADGQFDIISQTEEVPGDAWTDFLPESAV
HHHHCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCEEEECCCCCCCCCHHHHHCCCHHH
LKSDWQELGCGMFNTETNSCVQIKSNY
HHHHHHHHCCCEECCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1907262; 10984043; 1762155; 7813419; 10508151; 10708652 [H]