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The map label for this gene is 110679384

Identifier: 110679384

GI number: 110679384

Start: 2009526

End: 2009963

Strand: Reverse

Name: 110679384

Synonym: RD1_2106

Alternate gene names: NA

Gene position: 2009963-2009526 (Counterclockwise)

Preceding gene: 110679385

Following gene: 110679367

Centisome position: 48.63

GC content: 61.87

Gene sequence:

>438_bases
ATGGATCAAGCCGAATTGAACCGCATTCAACGCAGTTTTGAAGCGCAAAGCATGATGCACACCCTCGGCGCGGAGCTGGC
CAGCATCGCCCCGGCAGCGATCACCATCAAAGCGCCGATCTTGCCGGGCAGTCGGCAACAACAGGGGTTTGCCCATGCCG
GGCTGACCTTTGCCATCGGGGACAGCGCGGCAGGATACGCGGCGCTGACCACCCTGCCCCTTGACCGCGAGGTTGTGACG
GCCGAGATGAAAATCAACCTGCTTGCCCCTGCGCTTGGTGACCATCTGATCGCAAAGGGCCGCATCATCAAGACGGGCCG
CCAGTTGATCGTCGTCGCCGCGGATGTCTATGCGATGAACGGTGCACAGGAACGCCACGTCGCCGCCTTGCAGGGCACGA
TGGTGCCCGTTCCCGCAACCTCAAAGCATCCGGCTTAA

Upstream 100 bases:

>100_bases
ACAGCACCAAGCCCTTAACCAACTGATGGGCCCGCAAGCTCTTGCAATTCTGACTGGTCCGGTGCCCACTTGCGTGCCGA
TGCCACGATAGGACAGACCG

Downstream 100 bases:

>100_bases
GCCGTCAGCCCTTCGGGTTCCTCAAGACCGTTTGCACGACAACAGGCAGTGACCGTATTGGCCAGCAGGCAGGCGATGGT
CATCGGCCCTACACCGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Thioesterase Family Protein; Phenylacetic Acid Degradation-Related Protein; Phenylacetic Acid Degradation Protein Paai; Phenylacetic Acid Degradation Protein PaaI; Phenylacetic Acid Degradation Protein; Phenylacetic Acid Degradation Protein PAAI; Thioesterase/Thiol Ester Dehydrase-Isomerase; Thioesterase Superfamily; LOW QUALITY PROTEIN Thioesterase Superfamily Protein; Thioesterase

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MDQAELNRIQRSFEAQSMMHTLGAELASIAPAAITIKAPILPGSRQQQGFAHAGLTFAIGDSAAGYAALTTLPLDREVVT
AEMKINLLAPALGDHLIAKGRIIKTGRQLIVVAADVYAMNGAQERHVAALQGTMVPVPATSKHPA

Sequences:

>Translated_145_residues
MDQAELNRIQRSFEAQSMMHTLGAELASIAPAAITIKAPILPGSRQQQGFAHAGLTFAIGDSAAGYAALTTLPLDREVVT
AEMKINLLAPALGDHLIAKGRIIKTGRQLIVVAADVYAMNGAQERHVAALQGTMVPVPATSKHPA
>Mature_145_residues
MDQAELNRIQRSFEAQSMMHTLGAELASIAPAAITIKAPILPGSRQQQGFAHAGLTFAIGDSAAGYAALTTLPLDREVVT
AEMKINLLAPALGDHLIAKGRIIKTGRQLIVVAADVYAMNGAQERHVAALQGTMVPVPATSKHPA

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15217; Mature: 15217

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQAELNRIQRSFEAQSMMHTLGAELASIAPAAITIKAPILPGSRQQQGFAHAGLTFAIG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEC
DSAAGYAALTTLPLDREVVTAEMKINLLAPALGDHLIAKGRIIKTGRQLIVVAADVYAMN
CCCCCEEEEEECCCCCCEEEEEEEEEEECCHHCCHHHHCCEEEECCCEEEEEEEEEEECC
GAQERHVAALQGTMVPVPATSKHPA
CCCHHHHHHHCCCEECCCCCCCCCC
>Mature Secondary Structure
MDQAELNRIQRSFEAQSMMHTLGAELASIAPAAITIKAPILPGSRQQQGFAHAGLTFAIG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEC
DSAAGYAALTTLPLDREVVTAEMKINLLAPALGDHLIAKGRIIKTGRQLIVVAADVYAMN
CCCCCEEEEEECCCCCCEEEEEEEEEEECCHHCCHHHHCCEEEECCCEEEEEEEEEEECC
GAQERHVAALQGTMVPVPATSKHPA
CCCHHHHHHHCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA