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The map label for this gene is tolR [H]

Identifier: 110679374

GI number: 110679374

Start: 1998927

End: 1999421

Strand: Direct

Name: tolR [H]

Synonym: RD1_2095

Alternate gene names: 110679374

Gene position: 1998927-1999421 (Clockwise)

Preceding gene: 110679373

Following gene: 110679375

Centisome position: 48.36

GC content: 62.63

Gene sequence:

>495_bases
ATGGGTGCGAATGTTCTTCAGAAACCGGGCGGCAGCACAAAGCGGCGCAGGCGGACCACGCGCGCGCAGCCCATGTCCGA
GATCAACGTAACGCCATTCGTCGATGTGATGCTGGTGCTGCTGATCATCTTCATGGTCGCCGCACCGCTGTTGACGGTCG
GCGTGCCGGTTGAACTGCCCAAGACGGCAGCTGGCGCTTTGCCCACGGATCAGGAGGAACCCCTGACCGTAACGATCACG
GCGGAAGGATCCATCCAGATCCAGACCACTGAGACGGCAGGCAATGAACTGATCCCGAAACTGCGCTCCATCGCGGCGGA
GCGGACCTCGGACAGGGTGTTTTTGCGTGCCGATGGCTCTGTGCCTTACCTGCGCGTCATGGAGGTGATGGGGGCGCTCA
ACGCCGGTGGGTTTTCCAACATCGGTTTGGTGACGGATATCGGCGGGCCGACGCTTGATGGGCGCGATGGGGCTGCCGAC
GGGGCAGATCGGTAG

Upstream 100 bases:

>100_bases
CAACAAGCTCAGTGCGGATGCGGATCGTATTCTCGCAGGTTATGAATCCTTTGCCGATGAGTTCGCAACCATCCTCAGCC
GCCAGTTGGACAGTTGAGCC

Downstream 100 bases:

>100_bases
GCGGCGCGGTGCACACCGGTCATTATATCTCGGGGGCGGGGCATCTGTTTTTGCTGGGCTGGATGGCGTTTGGCGACGTC
TTTGCCGCTGAACCCTTGCC

Product: ExbD/TolR family biopolymer transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MGANVLQKPGGSTKRRRRTTRAQPMSEINVTPFVDVMLVLLIIFMVAAPLLTVGVPVELPKTAAGALPTDQEEPLTVTIT
AEGSIQIQTTETAGNELIPKLRSIAAERTSDRVFLRADGSVPYLRVMEVMGALNAGGFSNIGLVTDIGGPTLDGRDGAAD
GADR

Sequences:

>Translated_164_residues
MGANVLQKPGGSTKRRRRTTRAQPMSEINVTPFVDVMLVLLIIFMVAAPLLTVGVPVELPKTAAGALPTDQEEPLTVTIT
AEGSIQIQTTETAGNELIPKLRSIAAERTSDRVFLRADGSVPYLRVMEVMGALNAGGFSNIGLVTDIGGPTLDGRDGAAD
GADR
>Mature_163_residues
GANVLQKPGGSTKRRRRTTRAQPMSEINVTPFVDVMLVLLIIFMVAAPLLTVGVPVELPKTAAGALPTDQEEPLTVTITA
EGSIQIQTTETAGNELIPKLRSIAAERTSDRVFLRADGSVPYLRVMEVMGALNAGGFSNIGLVTDIGGPTLDGRDGAADG
ADR

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=120, Percent_Identity=43.3333333333333, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 17256; Mature: 17125

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGANVLQKPGGSTKRRRRTTRAQPMSEINVTPFVDVMLVLLIIFMVAAPLLTVGVPVELP
CCCCCCCCCCCCHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
KTAAGALPTDQEEPLTVTITAEGSIQIQTTETAGNELIPKLRSIAAERTSDRVFLRADGS
CCCCCCCCCCCCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCC
VPYLRVMEVMGALNAGGFSNIGLVTDIGGPTLDGRDGAADGADR
CCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GANVLQKPGGSTKRRRRTTRAQPMSEINVTPFVDVMLVLLIIFMVAAPLLTVGVPVELP
CCCCCCCCCCCHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
KTAAGALPTDQEEPLTVTITAEGSIQIQTTETAGNELIPKLRSIAAERTSDRVFLRADGS
CCCCCCCCCCCCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCC
VPYLRVMEVMGALNAGGFSNIGLVTDIGGPTLDGRDGAADGADR
CCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]