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The map label for this gene is tal

Identifier: 110679361

GI number: 110679361

Start: 1987190

End: 1987843

Strand: Reverse

Name: tal

Synonym: RD1_2080

Alternate gene names: 110679361

Gene position: 1987843-1987190 (Counterclockwise)

Preceding gene: 110679367

Following gene: 110679360

Centisome position: 48.1

GC content: 57.65

Gene sequence:

>654_bases
ATGAAGTTTTTCGTCGATACCGCCGACACGCAGGCCATTGCAGAGCTTAACGATCTGGGCATGGTCGATGGCGTCACCAC
GAACCCCTCGCTGATCCTGAAATCCGGACGTGACATCATCGAGGTGACAAAGGAAATCTGCGGCATCGTCTCTGGCCCGG
TGAGCGCCGAAGTGGTCGCGCTTGAAGCAGAGGCAATGATCGCCGAAGGGCGCAAGCTTGCCGAGATCGCGGAGAACATC
ACCGTCAAACTGCCCCTGACGTGGGATGGCCTCAAGGCGTGCAAGACCCTGTCGGATGAGGGTAAAATGGTCAATGTGAC
CCTCTGCTTCTCGGCTAATCAGGCGCTTTTGGCGGCCAAGGCCGGTGCCTCCTTCATCAGCCCCTTTATCGGGCGGCTCG
ATGACATGAGCCTGGATGGCTGCGAATTGATAGAGGACATCCGCACGATCTATGACAACTACGGGTTTGGCACTGAAATC
CTCGCGGCCTCCATCCGCACGGTGAACCACGTTCAGCAAGTGGCGCTGATCGGGGCAGATGTGATGACAGCGCCCCCAGA
AGTGATCCAGAAACTGGCCTCGCATCCGCTGACCGACAAGGGCTTGCAGCAATTCATGTCGGACTGGGAAAAAACCGGCC
AGAAGATCCTCTGA

Upstream 100 bases:

>100_bases
AATTGAGGGTTTCAGCATCGCAGATCATGCGGTAAAGCCAAGCGCAAGAGCGATCAACGCCGCGACACCTGAACACCGCG
CCAAAAAGGATACCACGCAC

Downstream 100 bases:

>100_bases
GACCCTGACACACCGCCTTACCGGCGCGCCGCCCTGACGCGGGGTGGCGCGTGCGGGCAACACATGCGGGTCGGTCGCAC
ATTTTGGCAGATTTTGAACA

Product: putative translaldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MKFFVDTADTQAIAELNDLGMVDGVTTNPSLILKSGRDIIEVTKEICGIVSGPVSAEVVALEAEAMIAEGRKLAEIAENI
TVKLPLTWDGLKACKTLSDEGKMVNVTLCFSANQALLAAKAGASFISPFIGRLDDMSLDGCELIEDIRTIYDNYGFGTEI
LAASIRTVNHVQQVALIGADVMTAPPEVIQKLASHPLTDKGLQQFMSDWEKTGQKIL

Sequences:

>Translated_217_residues
MKFFVDTADTQAIAELNDLGMVDGVTTNPSLILKSGRDIIEVTKEICGIVSGPVSAEVVALEAEAMIAEGRKLAEIAENI
TVKLPLTWDGLKACKTLSDEGKMVNVTLCFSANQALLAAKAGASFISPFIGRLDDMSLDGCELIEDIRTIYDNYGFGTEI
LAASIRTVNHVQQVALIGADVMTAPPEVIQKLASHPLTDKGLQQFMSDWEKTGQKIL
>Mature_217_residues
MKFFVDTADTQAIAELNDLGMVDGVTTNPSLILKSGRDIIEVTKEICGIVSGPVSAEVVALEAEAMIAEGRKLAEIAENI
TVKLPLTWDGLKACKTLSDEGKMVNVTLCFSANQALLAAKAGASFISPFIGRLDDMSLDGCELIEDIRTIYDNYGFGTEI
LAASIRTVNHVQQVALIGADVMTAPPEVIQKLASHPLTDKGLQQFMSDWEKTGQKIL

Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway

COG id: COG0176

COG function: function code G; Transaldolase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transaldolase family. Type 3B subfamily

Homologues:

Organism=Homo sapiens, GI5803187, Length=244, Percent_Identity=29.0983606557377, Blast_Score=86, Evalue=3e-17,
Organism=Escherichia coli, GI87081788, Length=212, Percent_Identity=32.0754716981132, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1790382, Length=211, Percent_Identity=31.7535545023697, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1788807, Length=196, Percent_Identity=31.6326530612245, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1786189, Length=241, Percent_Identity=29.4605809128631, Blast_Score=83, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI25153750, Length=245, Percent_Identity=28.5714285714286, Blast_Score=84, Evalue=7e-17,
Organism=Saccharomyces cerevisiae, GI6321480, Length=252, Percent_Identity=26.984126984127, Blast_Score=83, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6323386, Length=198, Percent_Identity=30.3030303030303, Blast_Score=70, Evalue=3e-13,
Organism=Drosophila melanogaster, GI45549185, Length=243, Percent_Identity=30.4526748971193, Blast_Score=84, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TAL_ROSDO (Q168B1)

Other databases:

- EMBL:   CP000362
- RefSeq:   YP_682368.1
- ProteinModelPortal:   Q168B1
- SMR:   Q168B1
- STRING:   Q168B1
- GeneID:   4196668
- GenomeReviews:   CP000362_GR
- KEGG:   rde:RD1_2080
- NMPDR:   fig|375451.6.peg.1942
- eggNOG:   COG0176
- HOGENOM:   HBG533000
- OMA:   IHKNIVI
- PhylomeDB:   Q168B1
- ProtClustDB:   PRK01362
- BioCyc:   RDEN375451:RD1_2080-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00494
- InterPro:   IPR013785
- InterPro:   IPR001585
- InterPro:   IPR004731
- InterPro:   IPR022999
- InterPro:   IPR018225
- Gene3D:   G3DSA:3.20.20.70
- PANTHER:   PTHR10683
- TIGRFAMs:   TIGR00875

Pfam domain/function: PF00923 Transaldolase

EC number: =2.2.1.2

Molecular weight: Translated: 23301; Mature: 23301

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: PS01054 TRANSALDOLASE_1; PS00958 TRANSALDOLASE_2; PS00217 SUGAR_TRANSPORT_2

Important sites: ACT_SITE 83-83

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFFVDTADTQAIAELNDLGMVDGVTTNPSLILKSGRDIIEVTKEICGIVSGPVSAEVVA
CEEEECCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCEEEE
LEAEAMIAEGRKLAEIAENITVKLPLTWDGLKACKTLSDEGKMVNVTLCFSANQALLAAK
EHHHHHHHCCHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCEEEEEEEECCCCHHHHHH
AGASFISPFIGRLDDMSLDGCELIEDIRTIYDNYGFGTEILAASIRTVNHVQQVALIGAD
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
VMTAPPEVIQKLASHPLTDKGLQQFMSDWEKTGQKIL
CCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKFFVDTADTQAIAELNDLGMVDGVTTNPSLILKSGRDIIEVTKEICGIVSGPVSAEVVA
CEEEECCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCEEEE
LEAEAMIAEGRKLAEIAENITVKLPLTWDGLKACKTLSDEGKMVNVTLCFSANQALLAAK
EHHHHHHHCCHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCEEEEEEEECCCCHHHHHH
AGASFISPFIGRLDDMSLDGCELIEDIRTIYDNYGFGTEILAASIRTVNHVQQVALIGAD
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
VMTAPPEVIQKLASHPLTDKGLQQFMSDWEKTGQKIL
CCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA