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The map label for this gene is 110679333

Identifier: 110679333

GI number: 110679333

Start: 1959933

End: 1960559

Strand: Reverse

Name: 110679333

Synonym: RD1_2052

Alternate gene names: NA

Gene position: 1960559-1959933 (Counterclockwise)

Preceding gene: 110679337

Following gene: 110679331

Centisome position: 47.44

GC content: 61.24

Gene sequence:

>627_bases
ATGACGGATAATGAAAAGGCGTTTGCCTATACGCTGCATGGCGACACGCTGGATACATCGCGGGTGCGCATCGTCGATGG
CGCGCCCACGCGGGCGGTGACCTTCACGCGCACGCCGCAACCGCGCACAACCTGCCGCCAGCGTATTTTACCGCCCCCAA
CAGGGGAAACGGTGACATCGAAACCTGCTGCGATCGCGCTTTACAATCACATCCTGTTTGATCGCGACTGGTATCTTGAG
GATTACATGCCCGATTACCCCGATCAGATCGGGTTGATCGCAGCCATGCTGTTTGGCCATGAGTTGACCCATGCCTGGCA
ATGGCAAAACCGGGCTGAAACGGGCTATTCCCCCTGGGCGGCGGCATTCGAGCACCGCGGGGCGCGCGACCCTTACCTGT
TCGATATTGATGCAAGCCCGGCATTCAACGATTTCGGATATGAGCAACAGGGCGCCATCGTCGAGGAATTCATCTGTTGC
CGCGCATTGGACCCGACCGCCCCGCGCACCGCGCGCCTGCATGCGCTCCTGTCGCAGGTGATGCCCGTCGCCCCGCTGCC
AAAGGAGAGGCCCTATGCTGTGGGGCTGCCGTGGGCGGGCGTCGAGTTGAAGGGGATTTGCCGTTGA

Upstream 100 bases:

>100_bases
CCAAAGACATCTTGATCCCTGCGCCACAATTCTGCACTGCTGCGGGATGCGATTGCTGATCTTTCTTTGTCTCGCCCTGT
TGACCGCTTGCGGGCGCCCG

Downstream 100 bases:

>100_bases
TCACGGCAGTTGCGACGCTTCAAGATAGGCCAGCAGGGCTGCTTGAGGTGCGGGAATCCGGGTGCGCCCCTGTTCGGTCT
TAATGCGCTCGGTGTCTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MTDNEKAFAYTLHGDTLDTSRVRIVDGAPTRAVTFTRTPQPRTTCRQRILPPPTGETVTSKPAAIALYNHILFDRDWYLE
DYMPDYPDQIGLIAAMLFGHELTHAWQWQNRAETGYSPWAAAFEHRGARDPYLFDIDASPAFNDFGYEQQGAIVEEFICC
RALDPTAPRTARLHALLSQVMPVAPLPKERPYAVGLPWAGVELKGICR

Sequences:

>Translated_208_residues
MTDNEKAFAYTLHGDTLDTSRVRIVDGAPTRAVTFTRTPQPRTTCRQRILPPPTGETVTSKPAAIALYNHILFDRDWYLE
DYMPDYPDQIGLIAAMLFGHELTHAWQWQNRAETGYSPWAAAFEHRGARDPYLFDIDASPAFNDFGYEQQGAIVEEFICC
RALDPTAPRTARLHALLSQVMPVAPLPKERPYAVGLPWAGVELKGICR
>Mature_207_residues
TDNEKAFAYTLHGDTLDTSRVRIVDGAPTRAVTFTRTPQPRTTCRQRILPPPTGETVTSKPAAIALYNHILFDRDWYLED
YMPDYPDQIGLIAAMLFGHELTHAWQWQNRAETGYSPWAAAFEHRGARDPYLFDIDASPAFNDFGYEQQGAIVEEFICCR
ALDPTAPRTARLHALLSQVMPVAPLPKERPYAVGLPWAGVELKGICR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23436; Mature: 23305

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDNEKAFAYTLHGDTLDTSRVRIVDGAPTRAVTFTRTPQPRTTCRQRILPPPTGETVTS
CCCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCC
KPAAIALYNHILFDRDWYLEDYMPDYPDQIGLIAAMLFGHELTHAWQWQNRAETGYSPWA
CCHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
AAFEHRGARDPYLFDIDASPAFNDFGYEQQGAIVEEFICCRALDPTAPRTARLHALLSQV
HHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH
MPVAPLPKERPYAVGLPWAGVELKGICR
CCCCCCCCCCCEEEECCCCCCEECCCCC
>Mature Secondary Structure 
TDNEKAFAYTLHGDTLDTSRVRIVDGAPTRAVTFTRTPQPRTTCRQRILPPPTGETVTS
CCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCC
KPAAIALYNHILFDRDWYLEDYMPDYPDQIGLIAAMLFGHELTHAWQWQNRAETGYSPWA
CCHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
AAFEHRGARDPYLFDIDASPAFNDFGYEQQGAIVEEFICCRALDPTAPRTARLHALLSQV
HHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH
MPVAPLPKERPYAVGLPWAGVELKGICR
CCCCCCCCCCCEEEECCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA