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The map label for this gene is ybfH [H]

Identifier: 110679240

GI number: 110679240

Start: 1866288

End: 1867208

Strand: Reverse

Name: ybfH [H]

Synonym: RD1_1953

Alternate gene names: 110679240

Gene position: 1867208-1866288 (Counterclockwise)

Preceding gene: 110679241

Following gene: 110679231

Centisome position: 45.18

GC content: 64.06

Gene sequence:

>921_bases
GTGTCACAACACCCCCAGATCACCGCCTCCAGTTGGCTCATGATCGCCATCCTCGGCGTGACGTGGGGCGGGACATTTCT
GGTGACGGAAATCGCCCTTGAGGGCATCACACCGTTCTGGCTCGCGGCGGCGCGCATCGGTTTTGCCGCGCTTTTGATGA
CCGCCTTCTGGGGCGCCATGGGGTTTCGCCTGTTTGAAAGCCCGCCCGACCGGCGTGTCTGGGGCGCGACCCTTTTCATC
GGCGCGTTCAGTTCCGCCGTTCCCTTCGTCTTACTGGCCTGGGGCCAGCAGTATGTCACGGCCGGATTTGCCGGTGTATC
GATGGCGGCCGTGGCGCTGATCGTCTTGCCGCTTGCGCATTTTCTGGTGCCCGGTGAAACCCTCACCCTTCGCAAGGGCA
TCGGGTTTGTCATCGGGTTCGTGGGCGTGTGCATACTGATCGGTGGGCAGGCCTTTGACACAACCGGCGCGCGCCTTGAG
CCCCTCGGCCGCATCGCCTGCGTTGGCGCGGCAAGTTGTTACGCCGTTTCTTCGGTCGTGCTGCGCCGCTTACCTGCGGT
GGATGCCATCGGGCTCTCTACGCTGTTGCTGTTGATCGGGATGGGGGTCGTGGTCCCCGCCGCGTTTATTGTCGAAGGCC
CTCCGGTGCTGCCGGACAACAAAACGCTGTGGGTGCTGGCCTTTTTGGGGCTGGTGCCGACCGCCGCCGCCAGTCTGCTG
CGGGTGCTTGTGGTGCGCACGGCGGGCCCGGTGTTCATGTCACTGGTCAATTATCAGGTGCCGGTTTGGTCGGTCGTGAT
GGGCGCGCTCTTGCTGAGCGAGCCGCTGCCACCCTCCCTGCTCTGGGCGATGATCCTGATCCTGAGCGGCGTGGGCCTGA
GCCAATATGGATCACTCAGTCGGCTGTTCAGGCGCGGCTAA

Upstream 100 bases:

>100_bases
AGATGGTTGATAAGTCCAAGAACTAAGCGTTCAACAGCTTTGAACCACGATCACCCCGGCGCAGCACGTCGGGGTGACGC
TTTTACGGTAGAAAGAACCC

Downstream 100 bases:

>100_bases
AGCGTCTAGCGAAATACATGACACATCAAGTATCACATAACCCGTTGAAATCTTTGATTTCAGGCAGCGTTACGTGATTC
AGGTTTATCGCATGACGCTT

Product: integral membrane protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MSQHPQITASSWLMIAILGVTWGGTFLVTEIALEGITPFWLAAARIGFAALLMTAFWGAMGFRLFESPPDRRVWGATLFI
GAFSSAVPFVLLAWGQQYVTAGFAGVSMAAVALIVLPLAHFLVPGETLTLRKGIGFVIGFVGVCILIGGQAFDTTGARLE
PLGRIACVGAASCYAVSSVVLRRLPAVDAIGLSTLLLLIGMGVVVPAAFIVEGPPVLPDNKTLWVLAFLGLVPTAAASLL
RVLVVRTAGPVFMSLVNYQVPVWSVVMGALLLSEPLPPSLLWAMILILSGVGLSQYGSLSRLFRRG

Sequences:

>Translated_306_residues
MSQHPQITASSWLMIAILGVTWGGTFLVTEIALEGITPFWLAAARIGFAALLMTAFWGAMGFRLFESPPDRRVWGATLFI
GAFSSAVPFVLLAWGQQYVTAGFAGVSMAAVALIVLPLAHFLVPGETLTLRKGIGFVIGFVGVCILIGGQAFDTTGARLE
PLGRIACVGAASCYAVSSVVLRRLPAVDAIGLSTLLLLIGMGVVVPAAFIVEGPPVLPDNKTLWVLAFLGLVPTAAASLL
RVLVVRTAGPVFMSLVNYQVPVWSVVMGALLLSEPLPPSLLWAMILILSGVGLSQYGSLSRLFRRG
>Mature_305_residues
SQHPQITASSWLMIAILGVTWGGTFLVTEIALEGITPFWLAAARIGFAALLMTAFWGAMGFRLFESPPDRRVWGATLFIG
AFSSAVPFVLLAWGQQYVTAGFAGVSMAAVALIVLPLAHFLVPGETLTLRKGIGFVIGFVGVCILIGGQAFDTTGARLEP
LGRIACVGAASCYAVSSVVLRRLPAVDAIGLSTLLLLIGMGVVVPAAFIVEGPPVLPDNKTLWVLAFLGLVPTAAASLLR
VLVVRTAGPVFMSLVNYQVPVWSVVMGALLLSEPLPPSLLWAMILILSGVGLSQYGSLSRLFRRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32235; Mature: 32104

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQHPQITASSWLMIAILGVTWGGTFLVTEIALEGITPFWLAAARIGFAALLMTAFWGAM
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
GFRLFESPPDRRVWGATLFIGAFSSAVPFVLLAWGQQYVTAGFAGVSMAAVALIVLPLAH
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLVPGETLTLRKGIGFVIGFVGVCILIGGQAFDTTGARLEPLGRIACVGAASCYAVSSVV
HHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LRRLPAVDAIGLSTLLLLIGMGVVVPAAFIVEGPPVLPDNKTLWVLAFLGLVPTAAASLL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RVLVVRTAGPVFMSLVNYQVPVWSVVMGALLLSEPLPPSLLWAMILILSGVGLSQYGSLS
HHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHH
RLFRRG
HHHHCC
>Mature Secondary Structure 
SQHPQITASSWLMIAILGVTWGGTFLVTEIALEGITPFWLAAARIGFAALLMTAFWGAM
CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH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HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]