| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is nthA [H]
Identifier: 110679197
GI number: 110679197
Start: 1821202
End: 1821834
Strand: Direct
Name: nthA [H]
Synonym: RD1_1908
Alternate gene names: 110679197
Gene position: 1821202-1821834 (Clockwise)
Preceding gene: 110679192
Following gene: 110679198
Centisome position: 44.06
GC content: 61.3
Gene sequence:
>633_bases ATGCCGCATGATCACGATGACCACACTCACCCGCATACTCTGCTGCCCAGCGACCCTGCGCTGCGCATCAAGGCTCTGGA AACGCTGCTGACCCGAAAAGGGCTGATTGATCCGCAAGCGCTGGATGCGATCATTGATACCTATGAAAACAGGATCGGCC CGCGCAACGGAGCGCATGTGGTGGTCAAAGCATGGACGGACCCCGCGTTCCGCGCCGCCTTGCTGGAGGATGCTACAAAG GTCGTGTCCGAACTGGGATATTATGGGCGTCAGGGCGAACATATGGTGGCCGTTGAAAACACGGATAGCGTTCATAACAT GGTCGTGTGCACCCTGTGCAGCTGTTATCCTTGGCCGCTGCTCGGCATTCCGCCGACTTGGTATAAATCGGATGCGTATC GCGCCCGCGCGGTACGCGAGCCGCGAAAGGTGCTGGCGGACTTTGGGGTCGCCTTGCCCTCTGACGTGGCCGTGCGCGTC TGGGACAGCACAGCCGAGGTGCGCTATCTGGTCATTCCGCGACGTCCCGATGGCACCGACGGATTGGATGAGAAGGCCTT GATGGACCTCGTCACCCGCGACAGCATGATCGGCACGGGCCTCGCGCACTACCCCGCGGCGGGCACGACATGA
Upstream 100 bases:
>100_bases CTTTGCCGGCATGAAGCCCGGGGCCCTTTGGTGGCCAGGTTCAGCATTTGCCATCCAAAGCGACTGGACAAACATGGCCG CTTGGACGCATCCTTGCGTC
Downstream 100 bases:
>100_bases CACGTCCGCACGACATGGGCGGGCGGTATGGCGACGGCCCTGTCATACCGGAAAATGAGAACCTGCGCTTCAAAGAGGAC TGGCATGCGCGTGCCTTGGC
Product: nitrile hydratase, alpha subunit
Products: NA
Alternate protein names: NHase; Nitrilase [H]
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MPHDHDDHTHPHTLLPSDPALRIKALETLLTRKGLIDPQALDAIIDTYENRIGPRNGAHVVVKAWTDPAFRAALLEDATK VVSELGYYGRQGEHMVAVENTDSVHNMVVCTLCSCYPWPLLGIPPTWYKSDAYRARAVREPRKVLADFGVALPSDVAVRV WDSTAEVRYLVIPRRPDGTDGLDEKALMDLVTRDSMIGTGLAHYPAAGTT
Sequences:
>Translated_210_residues MPHDHDDHTHPHTLLPSDPALRIKALETLLTRKGLIDPQALDAIIDTYENRIGPRNGAHVVVKAWTDPAFRAALLEDATK VVSELGYYGRQGEHMVAVENTDSVHNMVVCTLCSCYPWPLLGIPPTWYKSDAYRARAVREPRKVLADFGVALPSDVAVRV WDSTAEVRYLVIPRRPDGTDGLDEKALMDLVTRDSMIGTGLAHYPAAGTT >Mature_209_residues PHDHDDHTHPHTLLPSDPALRIKALETLLTRKGLIDPQALDAIIDTYENRIGPRNGAHVVVKAWTDPAFRAALLEDATKV VSELGYYGRQGEHMVAVENTDSVHNMVVCTLCSCYPWPLLGIPPTWYKSDAYRARAVREPRKVLADFGVALPSDVAVRVW DSTAEVRYLVIPRRPDGTDGLDEKALMDLVTRDSMIGTGLAHYPAAGTT
Specific function: NHase catalyzes the hydration of various nitrile compounds to the corresponding amides. Industrial production of acrylamide is now being developed using some of the enzymes of this class [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitrile hydratase subunit alpha family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004232 - InterPro: IPR018141 - ProDom: PD007559 [H]
Pfam domain/function: PF02979 NHase_alpha [H]
EC number: =4.2.1.84 [H]
Molecular weight: Translated: 23203; Mature: 23071
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHDHDDHTHPHTLLPSDPALRIKALETLLTRKGLIDPQALDAIIDTYENRIGPRNGAHV CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEE VVKAWTDPAFRAALLEDATKVVSELGYYGRQGEHMVAVENTDSVHNMVVCTLCSCYPWPL EEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCC LGIPPTWYKSDAYRARAVREPRKVLADFGVALPSDVAVRVWDSTAEVRYLVIPRRPDGTD CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCC GLDEKALMDLVTRDSMIGTGLAHYPAAGTT CCHHHHHHHHHHHHHHHHCCHHHCCCCCCC >Mature Secondary Structure PHDHDDHTHPHTLLPSDPALRIKALETLLTRKGLIDPQALDAIIDTYENRIGPRNGAHV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEE VVKAWTDPAFRAALLEDATKVVSELGYYGRQGEHMVAVENTDSVHNMVVCTLCSCYPWPL EEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCC LGIPPTWYKSDAYRARAVREPRKVLADFGVALPSDVAVRVWDSTAEVRYLVIPRRPDGTD CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCC GLDEKALMDLVTRDSMIGTGLAHYPAAGTT CCHHHHHHHHHHHHHHHHCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9154927 [H]