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The map label for this gene is 110679170

Identifier: 110679170

GI number: 110679170

Start: 1796492

End: 1797346

Strand: Reverse

Name: 110679170

Synonym: RD1_1880

Alternate gene names: NA

Gene position: 1797346-1796492 (Counterclockwise)

Preceding gene: 110679171

Following gene: 110679169

Centisome position: 43.49

GC content: 58.83

Gene sequence:

>855_bases
ATGCTAGACACGTCCCGACACGCGCCCCGCCTGCCCTATGGCCCGGGCGTCGGTTATAAACCACAACATTTCAGTGACCT
CATGGAACGGCCGGGCTGCGTTGAATGGCTTGAAATCCATGCGGAAAACTACATGGGCGATGGCGGGCGCCCGCACGCTC
AACTGCGCGCTCTACAGGAACGCTTTGCGCTGTCTGTTCACGGCGTCGGATTAAGCATCGGCGGCGCACCGCCCCTCGAC
AAGGCGCATCTGGCGCGCCTGAAAACCCTGTTGGGTCGCACAAATCCGGCCAGCTTTTCCGAACATCTGGCCTGGTCGAC
CCATGGTGCGGAATTTCTGAATGACCTGCTGCCCCTGCCCTATACGGACAAAACGCTGGCCGATGTCGCGGATCATATCG
ATGAGGTACAGGACACGATTGGCCGTCAAATGCTGCTTGAAAACCCGTCAAGCTATCTGGCCTTTGACGAAAGCACGTGG
TCCGAAACCGATTTTCTGGCGGAATTGGTCAAACGCACCGGCTGCGGTCTGTTGCTGGATGTCAATAACGTCTTCATCTC
CGCGACCAACCTCGGCTACACGCCGAAAGCATATATCGACGCCTACCCGCTTGCCGCAGTGGGCGAGATACATGTTGGCG
GTCACGACGAAGATGCCGACGATCACGGCGCGCCGCTGTTGATCGACAGCCATAGCAAGCCGGTGGTGGACCCTGTCTGG
GATTTGCTGACCTATACGATCTCGAAAACCGGACCGCGCCCCGTTTTGGTGGAATGGGACAATGACGTCCCCGATTGGCC
AGCCCTGCGGGCAGAGGCCGAGCGTGCCGCACACGTCTTAGAACCAGTAAGATGA

Upstream 100 bases:

>100_bases
CCGCGACCGTCCTGCATAAAGAAAACACGTGCGCCCGGCATTTTCTGTGTCGGGTGCTTTTCAGATACCTCTCGGCTGAC
CGCAATTCTCGGAGAGCCCC

Downstream 100 bases:

>100_bases
CTGTTGAACAGACCCAGTTTCGCGCAGCCTTGCTCGACGCTCAGGCAGCGGTGCCGCCCGGATTGTCGGATGGCGCAGGG
GCACCCGCCGGCAACCGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MLDTSRHAPRLPYGPGVGYKPQHFSDLMERPGCVEWLEIHAENYMGDGGRPHAQLRALQERFALSVHGVGLSIGGAPPLD
KAHLARLKTLLGRTNPASFSEHLAWSTHGAEFLNDLLPLPYTDKTLADVADHIDEVQDTIGRQMLLENPSSYLAFDESTW
SETDFLAELVKRTGCGLLLDVNNVFISATNLGYTPKAYIDAYPLAAVGEIHVGGHDEDADDHGAPLLIDSHSKPVVDPVW
DLLTYTISKTGPRPVLVEWDNDVPDWPALRAEAERAAHVLEPVR

Sequences:

>Translated_284_residues
MLDTSRHAPRLPYGPGVGYKPQHFSDLMERPGCVEWLEIHAENYMGDGGRPHAQLRALQERFALSVHGVGLSIGGAPPLD
KAHLARLKTLLGRTNPASFSEHLAWSTHGAEFLNDLLPLPYTDKTLADVADHIDEVQDTIGRQMLLENPSSYLAFDESTW
SETDFLAELVKRTGCGLLLDVNNVFISATNLGYTPKAYIDAYPLAAVGEIHVGGHDEDADDHGAPLLIDSHSKPVVDPVW
DLLTYTISKTGPRPVLVEWDNDVPDWPALRAEAERAAHVLEPVR
>Mature_284_residues
MLDTSRHAPRLPYGPGVGYKPQHFSDLMERPGCVEWLEIHAENYMGDGGRPHAQLRALQERFALSVHGVGLSIGGAPPLD
KAHLARLKTLLGRTNPASFSEHLAWSTHGAEFLNDLLPLPYTDKTLADVADHIDEVQDTIGRQMLLENPSSYLAFDESTW
SETDFLAELVKRTGCGLLLDVNNVFISATNLGYTPKAYIDAYPLAAVGEIHVGGHDEDADDHGAPLLIDSHSKPVVDPVW
DLLTYTISKTGPRPVLVEWDNDVPDWPALRAEAERAAHVLEPVR

Specific function: Unknown

COG id: COG3220

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0276 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007801
- InterPro:   IPR013022 [H]

Pfam domain/function: PF05114 DUF692 [H]

EC number: NA

Molecular weight: Translated: 31246; Mature: 31246

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDTSRHAPRLPYGPGVGYKPQHFSDLMERPGCVEWLEIHAENYMGDGGRPHAQLRALQE
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH
RFALSVHGVGLSIGGAPPLDKAHLARLKTLLGRTNPASFSEHLAWSTHGAEFLNDLLPLP
HHHHEEECCEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHCCCC
YTDKTLADVADHIDEVQDTIGRQMLLENPSSYLAFDESTWSETDFLAELVKRTGCGLLLD
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCEEEEE
VNNVFISATNLGYTPKAYIDAYPLAAVGEIHVGGHDEDADDHGAPLLIDSHSKPVVDPVW
CCCEEEEECCCCCCCHHHHCCCCCCEECEEEECCCCCCCCCCCCCEEECCCCCCCHHHHH
DLLTYTISKTGPRPVLVEWDNDVPDWPALRAEAERAAHVLEPVR
HHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLDTSRHAPRLPYGPGVGYKPQHFSDLMERPGCVEWLEIHAENYMGDGGRPHAQLRALQE
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH
RFALSVHGVGLSIGGAPPLDKAHLARLKTLLGRTNPASFSEHLAWSTHGAEFLNDLLPLP
HHHHEEECCEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHCCCC
YTDKTLADVADHIDEVQDTIGRQMLLENPSSYLAFDESTWSETDFLAELVKRTGCGLLLD
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCEEEEE
VNNVFISATNLGYTPKAYIDAYPLAAVGEIHVGGHDEDADDHGAPLLIDSHSKPVVDPVW
CCCEEEEECCCCCCCHHHHCCCCCCEECEEEECCCCCCCCCCCCCEEECCCCCCCHHHHH
DLLTYTISKTGPRPVLVEWDNDVPDWPALRAEAERAAHVLEPVR
HHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA