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The map label for this gene is mucS [H]

Identifier: 110679159

GI number: 110679159

Start: 1790282

End: 1790794

Strand: Direct

Name: mucS [H]

Synonym: RD1_1869

Alternate gene names: 110679159

Gene position: 1790282-1790794 (Clockwise)

Preceding gene: 110679158

Following gene: 110679163

Centisome position: 43.32

GC content: 53.8

Gene sequence:

>513_bases
ATGAGTATTCTTGATCCAATTAAGTCCGAGGCAGATCAGCCCGGTCAGAACCAGGGCTTTATGATCGCCTACCTGGAGGC
GTTGTCATTGGTCGAACGGCTGCATCGGCTGCTGCTTGATGTCATCAAGGACGAATTTGAACGCGTCGGCGTGCTGGAAA
TCAACGCGGTACAAGCGCTGCTCCTGTTCAATATTGGCGAGAATGAGGTCACCGCTGGCGAATTGAAAAGCCGCGGCTAT
TACCAGGGCAGCAATGTCAGTTACAACCTGAAAAAGCTGGTCGAAATGGGGTATATGCACCATCAGCGTTGCGAAATCGA
CCGCCGCTCAGTTCGGGTGAAGCTTACCGACAAGGGGCGCAAGATCCGTGATGTGGTCACGCTGCTCTTTTCACGACATG
CGGAAGGTCTGGAACAAAAGGGCGTATTGGGTCCCGCAGGCATCGACGATATCACACGGTCGCTCAAGCGGATGGAGCGG
TATTGGACGGACCAGATCCGCTACATCTACTGA

Upstream 100 bases:

>100_bases
ACATGTTATACAGTTTTAACGATCACAAAACTAATTTTTAACGAAATATTGGGCTTTCCGGCGCAATTTCTGGACAAATC
AGCAATGTCGGAGCGCGTGT

Downstream 100 bases:

>100_bases
ACATTATTCCAGCGAACTCACGGCAATGCCCGCGAGTTCGCGCTTCAGCTTTTGTGTCATCGCATGGGCATAATCCTCAA
ACCCAACTGCGGTCTGCACA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MSILDPIKSEADQPGQNQGFMIAYLEALSLVERLHRLLLDVIKDEFERVGVLEINAVQALLLFNIGENEVTAGELKSRGY
YQGSNVSYNLKKLVEMGYMHHQRCEIDRRSVRVKLTDKGRKIRDVVTLLFSRHAEGLEQKGVLGPAGIDDITRSLKRMER
YWTDQIRYIY

Sequences:

>Translated_170_residues
MSILDPIKSEADQPGQNQGFMIAYLEALSLVERLHRLLLDVIKDEFERVGVLEINAVQALLLFNIGENEVTAGELKSRGY
YQGSNVSYNLKKLVEMGYMHHQRCEIDRRSVRVKLTDKGRKIRDVVTLLFSRHAEGLEQKGVLGPAGIDDITRSLKRMER
YWTDQIRYIY
>Mature_169_residues
SILDPIKSEADQPGQNQGFMIAYLEALSLVERLHRLLLDVIKDEFERVGVLEINAVQALLLFNIGENEVTAGELKSRGYY
QGSNVSYNLKKLVEMGYMHHQRCEIDRRSVRVKLTDKGRKIRDVVTLLFSRHAEGLEQKGVLGPAGIDDITRSLKRMERY
WTDQIRYIY

Specific function: Transcriptional activator of genes for galactoglucan synthesis (exopolysaccharide II or EPS II) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19613; Mature: 19482

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSILDPIKSEADQPGQNQGFMIAYLEALSLVERLHRLLLDVIKDEFERVGVLEINAVQAL
CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHH
LLFNIGENEVTAGELKSRGYYQGSNVSYNLKKLVEMGYMHHQRCEIDRRSVRVKLTDKGR
HHHCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCC
KIRDVVTLLFSRHAEGLEQKGVLGPAGIDDITRSLKRMERYWTDQIRYIY
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure 
SILDPIKSEADQPGQNQGFMIAYLEALSLVERLHRLLLDVIKDEFERVGVLEINAVQAL
CCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHH
LLFNIGENEVTAGELKSRGYYQGSNVSYNLKKLVEMGYMHHQRCEIDRRSVRVKLTDKGR
HHHCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCC
KIRDVVTLLFSRHAEGLEQKGVLGPAGIDDITRSLKRMERYWTDQIRYIY
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8672816; 9023225; 9501442; 11481431 [H]