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The map label for this gene is 110679142

Identifier: 110679142

GI number: 110679142

Start: 1774220

End: 1774486

Strand: Direct

Name: 110679142

Synonym: RD1_1851

Alternate gene names: NA

Gene position: 1774220-1774486 (Clockwise)

Preceding gene: 110679141

Following gene: 162139374

Centisome position: 42.93

GC content: 53.56

Gene sequence:

>267_bases
ATGAAGAGAAGCCGTTTCAGCGAAGAGCAGATCATTGGCATTTTGAAAGAGCACCAGGCCGGGCTTGGCGCGAAAGAGCT
GTGCCGCAAGCATGGGATCAGCGATGCGACTTTTTACAAGTGGCGATCCAAGTATGGCGGCATGGAAGTGTCCGACGCAC
GGCGGCTCAAGACGCTTGAAAGCGAGAACACCAAACTGAAGAAGATGCTGGCCGAGCAGATGATGGACGTGGCGACGCTG
AAAGAGATGCTCGGAAAAAACTTCTGA

Upstream 100 bases:

>100_bases
CCGAGCTGGCTAAGAAGATTCCTGGCGTAGTTGCGTGACCTGCTCCCCTGAAAAGTCCTCGAATTTTGGTTAGCCTGTTC
TCCAACTGAGGAGACAGACG

Downstream 100 bases:

>100_bases
GGCCCGGTTCGAGGAGGAATGCTGTGAACTGGGCCATGAAGACCAAGGGCTACAATCAGAAACGGGCCTGTTCCTTGGCC
GGGATCGATCCGCGTGTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MKRSRFSEEQIIGILKEHQAGLGAKELCRKHGISDATFYKWRSKYGGMEVSDARRLKTLESENTKLKKMLAEQMMDVATL
KEMLGKNF

Sequences:

>Translated_88_residues
MKRSRFSEEQIIGILKEHQAGLGAKELCRKHGISDATFYKWRSKYGGMEVSDARRLKTLESENTKLKKMLAEQMMDVATL
KEMLGKNF
>Mature_88_residues
MKRSRFSEEQIIGILKEHQAGLGAKELCRKHGISDATFYKWRSKYGGMEVSDARRLKTLESENTKLKKMLAEQMMDVATL
KEMLGKNF

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR002514 [H]

Pfam domain/function: PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 10154; Mature: 10154

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSRFSEEQIIGILKEHQAGLGAKELCRKHGISDATFYKWRSKYGGMEVSDARRLKTLE
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH
SENTKLKKMLAEQMMDVATLKEMLGKNF
CCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKRSRFSEEQIIGILKEHQAGLGAKELCRKHGISDATFYKWRSKYGGMEVSDARRLKTLE
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH
SENTKLKKMLAEQMMDVATLKEMLGKNF
CCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2544911 [H]