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The map label for this gene is 110679139

Identifier: 110679139

GI number: 110679139

Start: 1770838

End: 1772070

Strand: Reverse

Name: 110679139

Synonym: RD1_1848

Alternate gene names: NA

Gene position: 1772070-1770838 (Counterclockwise)

Preceding gene: 110679140

Following gene: 110679138

Centisome position: 42.88

GC content: 53.77

Gene sequence:

>1233_bases
ATGGCAGGATCAGTAAATCAACAACAGGCCGTTATTTATTGCCGTGTGTCTGGGGCAAAGCAAGTGCGTGAAGGCGACGG
GCTGGCCTCTCAGGAAACGCGCTGCCGTGAATATGCGAAATACAAAGGCTACTGCGTTTTAGACGTGTTCACTGATGACA
TGACCGGTAAGGCCGCAAGTCGCCCAGGCATGCAATCGATGCTCGGTTATCTGCACATGAACGCCAGCAAGGGTAGTGAG
ATTGTCGTCATCATTGATGACATCAGCCGTCTGGCGCGCGGCCTGACAGCACATCTTGAGCTGCGTCAGTCCTTGGCTGG
CGCGGGCGGTAAGCTGGAAAGCCCATCGATTGAATTTGGCGAAGACAGCGATTCCGTGCTGGTAGAAAACCTTCTGGCTT
CGGTTGCCCAACACCAACGCGAGAAAAATGGCGAGCAAACGAGCAACCGCATGAAGGGCCGGATGATGAACGGCTATAGC
GTTTTCTGTGCGCCTGTCGGCTATCGCTATGAGAAAACAGCGGGCCATGGCAAGCTTTTGGTGCGCGACGAGCCTGCCGC
TTCCATCATTCGCAAGGCAATGGAAGGCTTTGCCTCTGGTCGCTTTGAAACCATGGCCGAGGTCAAACGTTACCTTGAAA
GTCAGCCTGCATTTCCAAACATCGACGGATCAATCCGCCAACAGGTTGTGACGGATTTATTCAGCCGTGTTCTCTATGCA
GGATATATTGAGCATGAGCCATGGGGGATCACACGACGCAAAGGCCATCATGAGGCGCTTGTGTCCTTGGAAACCTTTGA
GCGCATTCAAGCCCGCAAGGCAGAACGCAATCTCGCTCCGGCCCGAACAGATATTAATGCAGACTTTCCACTGCGTGGCG
CTGTCGCCTGCGCGGATTGTGATGCGCCGATGACCTCGTGCTGGTCAAAGAGTGCGACGGGCAAACGCTATCCCTATTTC
TGGTGCCAAACCAAAACCTGCGGCATGTATCGCAAGAGTATCCGCGCTGAAAAGATCGATGCAGCTTTTGCTGAAGTGAT
GCATGCACTTTCTCCAGCCAAGGGTCTGGTCGGTCTCGTAAAAACCATGTTGCACGATGCGTGGGGCCAGAGATTGGCGC
AAGCCAACACGATCAAAGAGACGACCAAGCGCGACATTGCTCAGTTGGACAAACAGCTCGATGGTCTGCTGGATCGCGTT
GTTGAATCAGACAACCCAACGGTCCTTTGGTAA

Upstream 100 bases:

>100_bases
CCGTCCAACAGGCTTGTGGAAAAAGCGATGATCCGCTGAGTGATGTGCCGCCTGATCTGCTATCCTTGTTAAAGAGCGAA
CAATCAGAACAGGAGGACCC

Downstream 100 bases:

>100_bases
TCCCCCCGAAATTTAGGGGTCTGCGGAAGTAGAATTTTCTCGAAGATGGAAGAGGAGATTCTGATGAAGAAATCGAAGTA
CAGCGACGCGCAGATCATGG

Product: site-specific DNA recombinase, putative

Products: NA

Alternate protein names: Resolvase Domain Protein; Resolvase; Resolvase Domain-Containing Protein; Recombinase; Resolvase Domain; Site-Specific DNA Recombinase; Cassette Chromosome Recombinase B; Bacteriophage Resolvase/Recombinase; Site-Specific Recombinase For Integration And Excision; Site-Specific Recombinases; Site-Specific Recombinase Resolvase Domain Protein; Resolvase Family Site-Specific Recombinase; Resolvase-Like Protein; Prophage Integrase; Site-Specific Integrase; Site-Specific RecombinaIVCA; Resolvase N Terminal Domain Family; DNA Recombinase; Site-Specific Recombinase/Resolvase

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MAGSVNQQQAVIYCRVSGAKQVREGDGLASQETRCREYAKYKGYCVLDVFTDDMTGKAASRPGMQSMLGYLHMNASKGSE
IVVIIDDISRLARGLTAHLELRQSLAGAGGKLESPSIEFGEDSDSVLVENLLASVAQHQREKNGEQTSNRMKGRMMNGYS
VFCAPVGYRYEKTAGHGKLLVRDEPAASIIRKAMEGFASGRFETMAEVKRYLESQPAFPNIDGSIRQQVVTDLFSRVLYA
GYIEHEPWGITRRKGHHEALVSLETFERIQARKAERNLAPARTDINADFPLRGAVACADCDAPMTSCWSKSATGKRYPYF
WCQTKTCGMYRKSIRAEKIDAAFAEVMHALSPAKGLVGLVKTMLHDAWGQRLAQANTIKETTKRDIAQLDKQLDGLLDRV
VESDNPTVLW

Sequences:

>Translated_410_residues
MAGSVNQQQAVIYCRVSGAKQVREGDGLASQETRCREYAKYKGYCVLDVFTDDMTGKAASRPGMQSMLGYLHMNASKGSE
IVVIIDDISRLARGLTAHLELRQSLAGAGGKLESPSIEFGEDSDSVLVENLLASVAQHQREKNGEQTSNRMKGRMMNGYS
VFCAPVGYRYEKTAGHGKLLVRDEPAASIIRKAMEGFASGRFETMAEVKRYLESQPAFPNIDGSIRQQVVTDLFSRVLYA
GYIEHEPWGITRRKGHHEALVSLETFERIQARKAERNLAPARTDINADFPLRGAVACADCDAPMTSCWSKSATGKRYPYF
WCQTKTCGMYRKSIRAEKIDAAFAEVMHALSPAKGLVGLVKTMLHDAWGQRLAQANTIKETTKRDIAQLDKQLDGLLDRV
VESDNPTVLW
>Mature_409_residues
AGSVNQQQAVIYCRVSGAKQVREGDGLASQETRCREYAKYKGYCVLDVFTDDMTGKAASRPGMQSMLGYLHMNASKGSEI
VVIIDDISRLARGLTAHLELRQSLAGAGGKLESPSIEFGEDSDSVLVENLLASVAQHQREKNGEQTSNRMKGRMMNGYSV
FCAPVGYRYEKTAGHGKLLVRDEPAASIIRKAMEGFASGRFETMAEVKRYLESQPAFPNIDGSIRQQVVTDLFSRVLYAG
YIEHEPWGITRRKGHHEALVSLETFERIQARKAERNLAPARTDINADFPLRGAVACADCDAPMTSCWSKSATGKRYPYFW
CQTKTCGMYRKSIRAEKIDAAFAEVMHALSPAKGLVGLVKTMLHDAWGQRLAQANTIKETTKRDIAQLDKQLDGLLDRVV
ESDNPTVLW

Specific function: Unknown

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45446; Mature: 45315

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGSVNQQQAVIYCRVSGAKQVREGDGLASQETRCREYAKYKGYCVLDVFTDDMTGKAAS
CCCCCCCCCEEEEEEECCCHHHHHCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCC
RPGMQSMLGYLHMNASKGSEIVVIIDDISRLARGLTAHLELRQSLAGAGGKLESPSIEFG
CCCHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
EDSDSVLVENLLASVAQHQREKNGEQTSNRMKGRMMNGYSVFCAPVGYRYEKTAGHGKLL
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEECCCCCEECCCCCCEEE
VRDEPAASIIRKAMEGFASGRFETMAEVKRYLESQPAFPNIDGSIRQQVVTDLFSRVLYA
EECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
GYIEHEPWGITRRKGHHEALVSLETFERIQARKAERNLAPARTDINADFPLRGAVACADC
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCC
DAPMTSCWSKSATGKRYPYFWCQTKTCGMYRKSIRAEKIDAAFAEVMHALSPAKGLVGLV
CCCHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
KTMLHDAWGQRLAQANTIKETTKRDIAQLDKQLDGLLDRVVESDNPTVLW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC
>Mature Secondary Structure 
AGSVNQQQAVIYCRVSGAKQVREGDGLASQETRCREYAKYKGYCVLDVFTDDMTGKAAS
CCCCCCCCEEEEEEECCCHHHHHCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCC
RPGMQSMLGYLHMNASKGSEIVVIIDDISRLARGLTAHLELRQSLAGAGGKLESPSIEFG
CCCHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
EDSDSVLVENLLASVAQHQREKNGEQTSNRMKGRMMNGYSVFCAPVGYRYEKTAGHGKLL
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEECCCCCEECCCCCCEEE
VRDEPAASIIRKAMEGFASGRFETMAEVKRYLESQPAFPNIDGSIRQQVVTDLFSRVLYA
EECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
GYIEHEPWGITRRKGHHEALVSLETFERIQARKAERNLAPARTDINADFPLRGAVACADC
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCC
DAPMTSCWSKSATGKRYPYFWCQTKTCGMYRKSIRAEKIDAAFAEVMHALSPAKGLVGLV
CCCHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
KTMLHDAWGQRLAQANTIKETTKRDIAQLDKQLDGLLDRVVESDNPTVLW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA