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The map label for this gene is dnaG [H]

Identifier: 110679090

GI number: 110679090

Start: 1722072

End: 1724027

Strand: Direct

Name: dnaG [H]

Synonym: RD1_1793

Alternate gene names: 110679090

Gene position: 1722072-1724027 (Clockwise)

Preceding gene: 110679089

Following gene: 110679091

Centisome position: 41.67

GC content: 59.25

Gene sequence:

>1956_bases
ATGAGCCTGCCGCCCGGATTTCTAGATGAACTGCGCACCAGATTGAGCCTGACTCAGGTGGTCGGACGCAAGGTCATGTG
GGATGCGCGCAAGTCCAATCAGGGCAAGGGCGACATGTGGGCGCCGTGCCCTTTTCATCAGGAAAAAACAGCGTCTTTTC
ATGTAGATGACCGCAAAGGGTTTTATTACTGTTTCGGCTGTCATGCCAAGGGGGACGCGATTTCCTTCGTGTGCGAAACC
GAAAATGTCGGCTTCATGGAAGCGGTCAGAATTCTTGCGCAGGAGGCCGGGATGCCCGTGCCGGAGCGGGACCTGCAAGC
CCAGCAGAAAGCGGACCGCCGCACGCAATTGGCAGAGGTGATGGAACTGGCGGTCAAGTATTTCCGCCTACAGTTGAACA
CCGGCCTTGCGGCAGAGGCGCGCGGCTATCTGGAGCGCCGCGGCCTGAGCGCGCAGGTCTTGGAGCGCTGGGAAATAGGC
TTTGCGCCGGATCAGTGGCAGGGACTTTGGGATCACCTCAAGGCAAAGAGTGTTGCGGATGATCTGATTTTGGCAGCGGG
ACTTGCCAAGCCATCCACCAAAGGGGGCAGGCCCTATGACACGTTTCGCGGACGGATCATGTACCCGATCCGCGATGCCC
GGGGCCGGGCCATCGCCTTTGGCGGTCGGGCAATGGACCCGAATGATAACGCCAAATATCTGAATTCTCCGGAAACGGAG
TTGTTTGATAAAGGCCGCAGTCTCTACAATCAGAAAGAGGCGCGGACCGCAGCCGGCAAGGGTCAGCCCCTGATCGTGGC
GGAGGGGTATATGGATGTTATCGCGCTTGATGCCGCCGGGTTCACTGCCGCCGTTGCTCCGCTGGGCACCGCGATCACCG
AAAACCAGCTCCAGATGCTCTGGCGGATTGCCCCCGAACCGATTGTCGCGCTCGATGGCGATACAGCGGGCTTGCGTGCC
GCAATGCGGTTGATTGATCTTGCCCTTCCCTTGCTTGAGGCGGGCCGGTCCTTGCGCTTTGCGATCATGCCAGCGGGCAA
GGATCCGGATGACCTGCTGCGCGAGCAGGGGGCCGGGGCGCTGCAAAAGCTGCTGGATGAGGCCCTGCCGATGGTGCAAC
TGTTGTGGCAGCGCGAGACCGAAGGCGGCGTTTTCGATAGCCCGGAGCGCAAGGCTGCCCTTGAAAAAGCGCTGCGTGAC
AAGGTTGCGCTGATCAAGGATCCCTCCATTCAAAACCATTACAAGCAGGAGTTAAAAGACCTGCAATGGCAGTTGTTTCG
CCCTCAACGCCAGAAAAACAAGGGCTGGCGTAAAGGCGGGCGGCCTTGGGGCGCGTCTGTCGCGACACCGTTGCAATCGA
CCAAAGCCTCGGCGCTGGCGAGTGCGCAAACGATCGATGTGACGGAAAACCTGCGCGAGGCGGTTCTGCTCGCCGCATTC
GCAACCTGCCCTTCGGTCATCGAAGAGTTTGAAAGTGATCTCGAGCGTATGACGTGCAGTGATCACACACATCAGGCGCT
GCGGGATATTCTGTTGCGCCACATGTCGGCCACCGCAGCCGAAATGCGGGCGGTGATTTCTGAAACTCTGGGACCTGACG
CCCTTGAAAACCTGCTGACACAGAGCCATGTGGCAATCGTACCCTGCATCCGCCGGCCCGGTGATGTGGAAAAAACCCGC
ATGACCGTCGCGGAAGAATTCGCAAAGCTCAGTGCAACCCGTGGCCTGAACGCGGAAATCGAGGAGGCGTCGGAAGACAT
GAGCGGTCTGGCGGATGAAGGGTTGACGTGGCGGCTGTCGCAGGCGGCCAAAGCGGCTGAAAATGCGCGCAAGAGTGTTC
ATGAGGACCGGGCAGAATACGAAACTGGGGCAAATGGGGCGCGAATCAGTCGGGATGAAAGAAATACTCTGGACGCCCTG
CTGGAGGCGATTAAGTCGCAAAAACCGCATGGTTAA

Upstream 100 bases:

>100_bases
TTGCCTCGGCCAATGAAACGCACGCTTGCGTTGCCCGCAGTGTAGCGCGGGGACGCCACGGCATCTGGACTCTCTGCCCG
GCTGGCCCGATACTTGAGGC

Downstream 100 bases:

>100_bases
CCATATTTGAAGAGTAAAGCGTGAAATAGTATTGCTTAACGGGTGGTCGAATCACCCAAAACGCTAGATGATTCCCCTGT
GATTCGGGCAAGCGAATCAA

Product: DNA primase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 651; Mature: 650

Protein sequence:

>651_residues
MSLPPGFLDELRTRLSLTQVVGRKVMWDARKSNQGKGDMWAPCPFHQEKTASFHVDDRKGFYYCFGCHAKGDAISFVCET
ENVGFMEAVRILAQEAGMPVPERDLQAQQKADRRTQLAEVMELAVKYFRLQLNTGLAAEARGYLERRGLSAQVLERWEIG
FAPDQWQGLWDHLKAKSVADDLILAAGLAKPSTKGGRPYDTFRGRIMYPIRDARGRAIAFGGRAMDPNDNAKYLNSPETE
LFDKGRSLYNQKEARTAAGKGQPLIVAEGYMDVIALDAAGFTAAVAPLGTAITENQLQMLWRIAPEPIVALDGDTAGLRA
AMRLIDLALPLLEAGRSLRFAIMPAGKDPDDLLREQGAGALQKLLDEALPMVQLLWQRETEGGVFDSPERKAALEKALRD
KVALIKDPSIQNHYKQELKDLQWQLFRPQRQKNKGWRKGGRPWGASVATPLQSTKASALASAQTIDVTENLREAVLLAAF
ATCPSVIEEFESDLERMTCSDHTHQALRDILLRHMSATAAEMRAVISETLGPDALENLLTQSHVAIVPCIRRPGDVEKTR
MTVAEEFAKLSATRGLNAEIEEASEDMSGLADEGLTWRLSQAAKAAENARKSVHEDRAEYETGANGARISRDERNTLDAL
LEAIKSQKPHG

Sequences:

>Translated_651_residues
MSLPPGFLDELRTRLSLTQVVGRKVMWDARKSNQGKGDMWAPCPFHQEKTASFHVDDRKGFYYCFGCHAKGDAISFVCET
ENVGFMEAVRILAQEAGMPVPERDLQAQQKADRRTQLAEVMELAVKYFRLQLNTGLAAEARGYLERRGLSAQVLERWEIG
FAPDQWQGLWDHLKAKSVADDLILAAGLAKPSTKGGRPYDTFRGRIMYPIRDARGRAIAFGGRAMDPNDNAKYLNSPETE
LFDKGRSLYNQKEARTAAGKGQPLIVAEGYMDVIALDAAGFTAAVAPLGTAITENQLQMLWRIAPEPIVALDGDTAGLRA
AMRLIDLALPLLEAGRSLRFAIMPAGKDPDDLLREQGAGALQKLLDEALPMVQLLWQRETEGGVFDSPERKAALEKALRD
KVALIKDPSIQNHYKQELKDLQWQLFRPQRQKNKGWRKGGRPWGASVATPLQSTKASALASAQTIDVTENLREAVLLAAF
ATCPSVIEEFESDLERMTCSDHTHQALRDILLRHMSATAAEMRAVISETLGPDALENLLTQSHVAIVPCIRRPGDVEKTR
MTVAEEFAKLSATRGLNAEIEEASEDMSGLADEGLTWRLSQAAKAAENARKSVHEDRAEYETGANGARISRDERNTLDAL
LEAIKSQKPHG
>Mature_650_residues
SLPPGFLDELRTRLSLTQVVGRKVMWDARKSNQGKGDMWAPCPFHQEKTASFHVDDRKGFYYCFGCHAKGDAISFVCETE
NVGFMEAVRILAQEAGMPVPERDLQAQQKADRRTQLAEVMELAVKYFRLQLNTGLAAEARGYLERRGLSAQVLERWEIGF
APDQWQGLWDHLKAKSVADDLILAAGLAKPSTKGGRPYDTFRGRIMYPIRDARGRAIAFGGRAMDPNDNAKYLNSPETEL
FDKGRSLYNQKEARTAAGKGQPLIVAEGYMDVIALDAAGFTAAVAPLGTAITENQLQMLWRIAPEPIVALDGDTAGLRAA
MRLIDLALPLLEAGRSLRFAIMPAGKDPDDLLREQGAGALQKLLDEALPMVQLLWQRETEGGVFDSPERKAALEKALRDK
VALIKDPSIQNHYKQELKDLQWQLFRPQRQKNKGWRKGGRPWGASVATPLQSTKASALASAQTIDVTENLREAVLLAAFA
TCPSVIEEFESDLERMTCSDHTHQALRDILLRHMSATAAEMRAVISETLGPDALENLLTQSHVAIVPCIRRPGDVEKTRM
TVAEEFAKLSATRGLNAEIEEASEDMSGLADEGLTWRLSQAAKAAENARKSVHEDRAEYETGANGARISRDERNTLDALL
EAIKSQKPHG

Specific function: DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments on both template strands at replication forks during chromosomal DNA synthesis [H]

COG id: COG0358

COG function: function code L; DNA primase (bacterial type)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1789447, Length=420, Percent_Identity=37.3809523809524, Blast_Score=284, Evalue=1e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013264
- InterPro:   IPR006295
- InterPro:   IPR006171
- InterPro:   IPR002694 [H]

Pfam domain/function: PF01751 Toprim; PF08275 Toprim_N; PF01807 zf-CHC2 [H]

EC number: 2.7.7.-

Molecular weight: Translated: 71938; Mature: 71806

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPPGFLDELRTRLSLTQVVGRKVMWDARKSNQGKGDMWAPCPFHQEKTASFHVDDRKG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCC
FYYCFGCHAKGDAISFVCETENVGFMEAVRILAQEAGMPVPERDLQAQQKADRRTQLAEV
EEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
MELAVKYFRLQLNTGLAAEARGYLERRGLSAQVLERWEIGFAPDQWQGLWDHLKAKSVAD
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
DLILAAGLAKPSTKGGRPYDTFRGRIMYPIRDARGRAIAFGGRAMDPNDNAKYLNSPETE
HHHHHHCCCCCCCCCCCCCHHHCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCHHH
LFDKGRSLYNQKEARTAAGKGQPLIVAEGYMDVIALDAAGFTAAVAPLGTAITENQLQML
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
WRIAPEPIVALDGDTAGLRAAMRLIDLALPLLEAGRSLRFAIMPAGKDPDDLLREQGAGA
HHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCHH
LQKLLDEALPMVQLLWQRETEGGVFDSPERKAALEKALRDKVALIKDPSIQNHYKQELKD
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LQWQLFRPQRQKNKGWRKGGRPWGASVATPLQSTKASALASAQTIDVTENLREAVLLAAF
HHHHHCCCHHHHCCCHHCCCCCCCCCHHCHHHHHHHHHHHHHHHEHHHHHHHHHHHHHHH
ATCPSVIEEFESDLERMTCSDHTHQALRDILLRHMSATAAEMRAVISETLGPDALENLLT
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
QSHVAIVPCIRRPGDVEKTRMTVAEEFAKLSATRGLNAEIEEASEDMSGLADEGLTWRLS
HCCCEEEHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEHH
QAAKAAENARKSVHEDRAEYETGANGARISRDERNTLDALLEAIKSQKPHG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SLPPGFLDELRTRLSLTQVVGRKVMWDARKSNQGKGDMWAPCPFHQEKTASFHVDDRKG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCC
FYYCFGCHAKGDAISFVCETENVGFMEAVRILAQEAGMPVPERDLQAQQKADRRTQLAEV
EEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
MELAVKYFRLQLNTGLAAEARGYLERRGLSAQVLERWEIGFAPDQWQGLWDHLKAKSVAD
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
DLILAAGLAKPSTKGGRPYDTFRGRIMYPIRDARGRAIAFGGRAMDPNDNAKYLNSPETE
HHHHHHCCCCCCCCCCCCCHHHCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCHHH
LFDKGRSLYNQKEARTAAGKGQPLIVAEGYMDVIALDAAGFTAAVAPLGTAITENQLQML
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
WRIAPEPIVALDGDTAGLRAAMRLIDLALPLLEAGRSLRFAIMPAGKDPDDLLREQGAGA
HHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCHH
LQKLLDEALPMVQLLWQRETEGGVFDSPERKAALEKALRDKVALIKDPSIQNHYKQELKD
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LQWQLFRPQRQKNKGWRKGGRPWGASVATPLQSTKASALASAQTIDVTENLREAVLLAAF
HHHHHCCCHHHHCCCHHCCCCCCCCCHHCHHHHHHHHHHHHHHHEHHHHHHHHHHHHHHH
ATCPSVIEEFESDLERMTCSDHTHQALRDILLRHMSATAAEMRAVISETLGPDALENLLT
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
QSHVAIVPCIRRPGDVEKTRMTVAEEFAKLSATRGLNAEIEEASEDMSGLADEGLTWRLS
HCCCEEEHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEHH
QAAKAAENARKSVHEDRAEYETGANGARISRDERNTLDALLEAIKSQKPHG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferring phosphorus-containing groups; Nucleotidyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]