| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110679029
Identifier: 110679029
GI number: 110679029
Start: 1658832
End: 1659725
Strand: Reverse
Name: 110679029
Synonym: RD1_1728
Alternate gene names: NA
Gene position: 1659725-1658832 (Counterclockwise)
Preceding gene: 110679035
Following gene: 110679028
Centisome position: 40.16
GC content: 62.53
Gene sequence:
>894_bases ATGAAACTCAGCCCCAAATCCTATTTGCTTGGTGTGGACGGCGGCGGAACCGGCTGCCGGGTCGCCATATCCGACACGTG TGGTCGGCGCATTGGCGGTGCATCCGGCGGGCCAGCCAATTTCGCAACCGACCCGGACAGCGCACTCCGGAACATTCTTA CCGCCCTCGATGCGGCAGCGTCTGATGCCGGTCTTGCAAGCGGGTGGTCGGAGGCATGCGTGGCCCATGTGGGGCTTGCG GGCATTATGGAACCTTCGGATGCGGAACGGGTCGAATCCGCCCTGCCGTTCACACAGATCACCGTGAGCGACGACCGCGA GACCTCGGTGGCGGGTGCGCTTGGCCCACAAGACGGGGTCTTGATGGCCATTGGCACGGGAACGATCGTTGCCGCGCAGT CGCAAGGTTCTACCCGATACTTCGGCGGATGGGGGATGGCCCTGGCGGATCAGGCTTCGGGCGGGTGGCTCGGGCAACGC GCCTTGCGCCAGACCGTTCTGGCGCTTGATGGCCTGCAAGCGCATTCCGCCATGACCAAAAACCTGCTGGACCTTTTTGA CAACGATCCAAACCAAATTGTCCAATTCTCAAAACACGCCGAACCCGGGGACTATGCCGGTTTTGCGCCAATGATTATCG ACGCCGCACGTATGCAGGATGACAACGCACAGGCCTTGATGCAGCGGGGTGCCGCCTATCTGAACGCCTGCATCAAAGCG GCGGATCTCGCCGAGACGGCCGCTTTGTGTCTTTCAGGTGGGGTGGGCCCGCATTACGCCGACTATCTTGATCCGCGCTG TCAGAACCGACTGCAAGCCCCCAAGGGCTCCGCCCTCGACGGGGCGTTGATGCTTGCGCATCAGGCCTTGCATCAAGGGA CGGGCGCGCGATGA
Upstream 100 bases:
>100_bases TGGTTTAAGATCACGATTATTCGCCGAGAACCATATAGTTTCACCCTTTTGGTCTATTATTGGCTATTTATGAATCAAAT AGGTATGATATAGGTATTTT
Downstream 100 bases:
>100_bases ATGTTGCCGCTTTCCTAGAACCTGCGGACTGGTTCCGTTCAAAAGGGGGCCCGCGGTATATTCAACTGCGCCAAAGGCTC AGCGACGGGGTCACGACCGG
Product: putative N-acetylglucosamine kinase
Products: NA
Alternate protein names: N-Acetylglucosamine Kinase; BadF/BadG/BcrA/BcrD ATPase Family Protein; BadF/BadG/BcrA/BcrD Family ATPase; ATPase Family Protein; N-Acetylglucosamine Kinase Protein; BadF/BadG/BcrA/BcrD Type ATPase; ATPase Badf/Badg/Bcra/Bcrd Type; BadF/BadG/BcrA/BcrD ATPase Family Superfamily; BadF/BadG/BcrA/BcrD ATPase Family; Glucosamine Kinase GpsK; Aryl-Alcohol Dehydrogenase; Glucosamine Kinase; BadF/BadG/BcrA/BcrD ATPase
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MKLSPKSYLLGVDGGGTGCRVAISDTCGRRIGGASGGPANFATDPDSALRNILTALDAAASDAGLASGWSEACVAHVGLA GIMEPSDAERVESALPFTQITVSDDRETSVAGALGPQDGVLMAIGTGTIVAAQSQGSTRYFGGWGMALADQASGGWLGQR ALRQTVLALDGLQAHSAMTKNLLDLFDNDPNQIVQFSKHAEPGDYAGFAPMIIDAARMQDDNAQALMQRGAAYLNACIKA ADLAETAALCLSGGVGPHYADYLDPRCQNRLQAPKGSALDGALMLAHQALHQGTGAR
Sequences:
>Translated_297_residues MKLSPKSYLLGVDGGGTGCRVAISDTCGRRIGGASGGPANFATDPDSALRNILTALDAAASDAGLASGWSEACVAHVGLA GIMEPSDAERVESALPFTQITVSDDRETSVAGALGPQDGVLMAIGTGTIVAAQSQGSTRYFGGWGMALADQASGGWLGQR ALRQTVLALDGLQAHSAMTKNLLDLFDNDPNQIVQFSKHAEPGDYAGFAPMIIDAARMQDDNAQALMQRGAAYLNACIKA ADLAETAALCLSGGVGPHYADYLDPRCQNRLQAPKGSALDGALMLAHQALHQGTGAR >Mature_297_residues MKLSPKSYLLGVDGGGTGCRVAISDTCGRRIGGASGGPANFATDPDSALRNILTALDAAASDAGLASGWSEACVAHVGLA GIMEPSDAERVESALPFTQITVSDDRETSVAGALGPQDGVLMAIGTGTIVAAQSQGSTRYFGGWGMALADQASGGWLGQR ALRQTVLALDGLQAHSAMTKNLLDLFDNDPNQIVQFSKHAEPGDYAGFAPMIIDAARMQDDNAQALMQRGAAYLNACIKA ADLAETAALCLSGGVGPHYADYLDPRCQNRLQAPKGSALDGALMLAHQALHQGTGAR
Specific function: Unknown
COG id: COG2971
COG function: function code G; Predicted N-acetylglucosamine kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30502; Mature: 30502
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSPKSYLLGVDGGGTGCRVAISDTCGRRIGGASGGPANFATDPDSALRNILTALDAAA CCCCCCCEEEEECCCCCCEEEEECCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH SDAGLASGWSEACVAHVGLAGIMEPSDAERVESALPFTQITVSDDRETSVAGALGPQDGV CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEEECCCCCHHHHCCCCCCCCE LMAIGTGTIVAAQSQGSTRYFGGWGMALADQASGGWLGQRALRQTVLALDGLQAHSAMTK EEEEECCEEEEECCCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH NLLDLFDNDPNQIVQFSKHAEPGDYAGFAPMIIDAARMQDDNAQALMQRGAAYLNACIKA HHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ADLAETAALCLSGGVGPHYADYLDPRCQNRLQAPKGSALDGALMLAHQALHQGTGAR HHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKLSPKSYLLGVDGGGTGCRVAISDTCGRRIGGASGGPANFATDPDSALRNILTALDAAA CCCCCCCEEEEECCCCCCEEEEECCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH SDAGLASGWSEACVAHVGLAGIMEPSDAERVESALPFTQITVSDDRETSVAGALGPQDGV CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEEECCCCCHHHHCCCCCCCCE LMAIGTGTIVAAQSQGSTRYFGGWGMALADQASGGWLGQRALRQTVLALDGLQAHSAMTK EEEEECCEEEEECCCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH NLLDLFDNDPNQIVQFSKHAEPGDYAGFAPMIIDAARMQDDNAQALMQRGAAYLNACIKA HHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ADLAETAALCLSGGVGPHYADYLDPRCQNRLQAPKGSALDGALMLAHQALHQGTGAR HHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA