| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is nnrS
Identifier: 110678997
GI number: 110678997
Start: 1625456
End: 1626661
Strand: Direct
Name: nnrS
Synonym: RD1_1694
Alternate gene names: NA
Gene position: 1625456-1626661 (Clockwise)
Preceding gene: 110678996
Following gene: 110678998
Centisome position: 39.33
GC content: 61.28
Gene sequence:
>1206_bases ATGGCGCAAACAACGTCTCAACAAAGCCGGGAATGGCAGGGTCCCGGTGTTTTTTCCTACGGCTTCCGGCCGTTCTTTCT TTTTGGTGCTGTTTGGGCGGCTTTGGCGATGGTGTTCTGGGTTCTGGCGCTCGCGGGTCATGTCAGCCTGCCGACCCGGC TTGATCCGGCCTCCTGGCATGCGCATGCGCTGCTCTTTGGTTATCTCGGGGCGATCATCGCGGGCTTTTTGCTGACGGCA GTGCCCAACTGGACCGGGCGGTTGCCGATTGTCGGCTGGCCATTGGCCGGGTTGTTCGTTCTGTGGCTCGGCGGGCGGGT TGCCATCGCCACGTCGGCTCTTTTGCCCCCGGGTGTGGCCGAGGCCTTCAACCTTTTGTTTCCCATCGCGCTCTGCGGTG TCATGCTGCGTGAAATCATTGCGGGCAAGAACTGGCGCAATCTGGTGGTGCTTGCGATGGTTGTGGTCTTCACGCTGGCC AATCTGCTTTTCCATATCGAAGCGGCGCGGGGCGAGATGGCCGCGCAGGGGGTTGGGGCGCGTCTTGGTGTGGCATGCGT GATCATGATGATTGCTGTCATCGGGGGGCGCGTTATCCCATCCTTTACCCGCAACTGGCTCGTGCGCCAAAAGGCGGCGC GCTTGCCGACCCCGCCGATGCAGGGTTTTGACAAGGTCGCGCTTCTGATCACGCTGTTTGGCCTGTGTTGCTGGGTTGCG GCGCCAGATCACACGATGTCGGCAGCGGCGTTGCTGATCATCGGGGGGGTGCATCTGATCCGCCTTATGCGCTGGCAGGG TGTGCAAACCGTCGCTGAGCCGCTGCTGTTGGTGTTGCATCTGGGGTATCTTTTTGTCCCGCTTGGTGCATTTGTCGCCG CGGTTTCGATATTCATTACCGACGCAATGATGCTCGTCGCTGCGCAACACCTATGGATGGCAGGTGGTTTCGGTCTGATG ACCCTGGCGATGATGACCCGCGCGACATTGGGGCATACCGGGCAGGAACTGACCGCAGGACCGGGTACCGTTGCGATCTA CCTCGCCTTGATCGGTTCGGTGTTCGCCCGGCTTGCCGGGGCAATCTGGGTCGGTTCGGCCATGACGCTTTACGCTGTAT CCGGCGTGTTGTGGGCCGGCGCGTTTGTCGGCTTTGCAATTGTTTACGGCCCCGCTCTGCTGAAGCCCAAAGCGGCGCGC GCATGA
Upstream 100 bases:
>100_bases TGCGATCCTGAAACGCACCAGTTTTACCGCAAAATCCCGCACCCCGGCGCGTGCTGACATCGCGCCGGAAGTGTAACGAA AGATCGATCGAGGGTCTGCC
Downstream 100 bases:
>100_bases GCGGTTGGCTGACATTTGCGGGCGTGTTCGCGCTGTTCTTTGCGACGCATTCCATCCCCGTGCGGCCGCCCGTCAAAAAA CGTCTGGTCAGGCATCTGGG
Product: NnrS protein, putative
Products: NA
Alternate protein names: NnrS Protein; Heme/Copper Membrane Protein; Protein Involved In Response NO; Heme-Cu Protein NnrS; Nitrite/Nitric Oxide Reductase-Related Protein NnrS; NnrS Transmembrane Protein; Transmembrane Protein; Heme-Cu-Containing Membrane Protein; Heme/Copper Membrane Protein Of NnrS Family Protein; Nitrite And/Or Nitric Oxide Reductase; NnrS-Like Protein; Asparagine Synthetase B; ATP Synthase F0 Subunit A; Heme-Cu Membrane Protein; LOW QUALITY PROTEIN NnrS Family Protein; Nnrs Family Protein; ATP Synthase F0 A Subunit; Integral Inner Membrane Permease; NnrS Protein Superfamily; Asparagine Synthetase
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MAQTTSQQSREWQGPGVFSYGFRPFFLFGAVWAALAMVFWVLALAGHVSLPTRLDPASWHAHALLFGYLGAIIAGFLLTA VPNWTGRLPIVGWPLAGLFVLWLGGRVAIATSALLPPGVAEAFNLLFPIALCGVMLREIIAGKNWRNLVVLAMVVVFTLA NLLFHIEAARGEMAAQGVGARLGVACVIMMIAVIGGRVIPSFTRNWLVRQKAARLPTPPMQGFDKVALLITLFGLCCWVA APDHTMSAAALLIIGGVHLIRLMRWQGVQTVAEPLLLVLHLGYLFVPLGAFVAAVSIFITDAMMLVAAQHLWMAGGFGLM TLAMMTRATLGHTGQELTAGPGTVAIYLALIGSVFARLAGAIWVGSAMTLYAVSGVLWAGAFVGFAIVYGPALLKPKAAR A
Sequences:
>Translated_401_residues MAQTTSQQSREWQGPGVFSYGFRPFFLFGAVWAALAMVFWVLALAGHVSLPTRLDPASWHAHALLFGYLGAIIAGFLLTA VPNWTGRLPIVGWPLAGLFVLWLGGRVAIATSALLPPGVAEAFNLLFPIALCGVMLREIIAGKNWRNLVVLAMVVVFTLA NLLFHIEAARGEMAAQGVGARLGVACVIMMIAVIGGRVIPSFTRNWLVRQKAARLPTPPMQGFDKVALLITLFGLCCWVA APDHTMSAAALLIIGGVHLIRLMRWQGVQTVAEPLLLVLHLGYLFVPLGAFVAAVSIFITDAMMLVAAQHLWMAGGFGLM TLAMMTRATLGHTGQELTAGPGTVAIYLALIGSVFARLAGAIWVGSAMTLYAVSGVLWAGAFVGFAIVYGPALLKPKAAR A >Mature_400_residues AQTTSQQSREWQGPGVFSYGFRPFFLFGAVWAALAMVFWVLALAGHVSLPTRLDPASWHAHALLFGYLGAIIAGFLLTAV PNWTGRLPIVGWPLAGLFVLWLGGRVAIATSALLPPGVAEAFNLLFPIALCGVMLREIIAGKNWRNLVVLAMVVVFTLAN LLFHIEAARGEMAAQGVGARLGVACVIMMIAVIGGRVIPSFTRNWLVRQKAARLPTPPMQGFDKVALLITLFGLCCWVAA PDHTMSAAALLIIGGVHLIRLMRWQGVQTVAEPLLLVLHLGYLFVPLGAFVAAVSIFITDAMMLVAAQHLWMAGGFGLMT LAMMTRATLGHTGQELTAGPGTVAIYLALIGSVFARLAGAIWVGSAMTLYAVSGVLWAGAFVGFAIVYGPALLKPKAARA
Specific function: Unknown
COG id: COG3213
COG function: function code P; Uncharacterized protein involved in response to NO
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42637; Mature: 42506
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQTTSQQSREWQGPGVFSYGFRPFFLFGAVWAALAMVFWVLALAGHVSLPTRLDPASWH CCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH AHALLFGYLGAIIAGFLLTAVPNWTGRLPIVGWPLAGLFVLWLGGRVAIATSALLPPGVA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHCCHHHHHHHHCCCCCHH EAFNLLFPIALCGVMLREIIAGKNWRNLVVLAMVVVFTLANLLFHIEAARGEMAAQGVGA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH RLGVACVIMMIAVIGGRVIPSFTRNWLVRQKAARLPTPPMQGFDKVALLITLFGLCCWVA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC APDHTMSAAALLIIGGVHLIRLMRWQGVQTVAEPLLLVLHLGYLFVPLGAFVAAVSIFIT CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAMMLVAAQHLWMAGGFGLMTLAMMTRATLGHTGQELTAGPGTVAIYLALIGSVFARLAG HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AIWVGSAMTLYAVSGVLWAGAFVGFAIVYGPALLKPKAARA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AQTTSQQSREWQGPGVFSYGFRPFFLFGAVWAALAMVFWVLALAGHVSLPTRLDPASWH CCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH AHALLFGYLGAIIAGFLLTAVPNWTGRLPIVGWPLAGLFVLWLGGRVAIATSALLPPGVA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHCCHHHHHHHHCCCCCHH EAFNLLFPIALCGVMLREIIAGKNWRNLVVLAMVVVFTLANLLFHIEAARGEMAAQGVGA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH RLGVACVIMMIAVIGGRVIPSFTRNWLVRQKAARLPTPPMQGFDKVALLITLFGLCCWVA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC APDHTMSAAALLIIGGVHLIRLMRWQGVQTVAEPLLLVLHLGYLFVPLGAFVAAVSIFIT CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAMMLVAAQHLWMAGGFGLMTLAMMTRATLGHTGQELTAGPGTVAIYLALIGSVFARLAG HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AIWVGSAMTLYAVSGVLWAGAFVGFAIVYGPALLKPKAARA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA