| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110678910
Identifier: 110678910
GI number: 110678910
Start: 1548516
End: 1548650
Strand: Direct
Name: 110678910
Synonym: RD1_1604
Alternate gene names: NA
Gene position: 1548516-1548650 (Clockwise)
Preceding gene: 110678908
Following gene: 110678922
Centisome position: 37.47
GC content: 57.78
Gene sequence:
>135_bases TTGTTGTCAGGCGTTGGTATCGTGTCTGTGACGCGTCCGGATCTGGTGTTGGTGACGCGCCTGAAAGTGGTATCGGTGAC GTGTCGGTATCACGTCGGTATGTCGTCGGTGCGCCGGTGGCGCTTTTGGGTGTAA
Upstream 100 bases:
>100_bases CCACTTTCAGCCCCAGTTGGGCGCAGCGAATGGCGCAGACATAGCCGCCGGGGCCTGAGCCGATGATGATCACGTCGTAG CTGGCCATGGTATTTTTCCT
Downstream 100 bases:
>100_bases ACTGGCATCAAATCAGCCCTGCAATCAACAGCGCGGTTGTCGCGGCGATGCCGATCATCCAGATGATCGACCGCCAGGGG CTGAGGCCAAAGGCATAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 44; Mature: 44
Protein sequence:
>44_residues MLSGVGIVSVTRPDLVLVTRLKVVSVTCRYHVGMSSVRRWRFWV
Sequences:
>Translated_44_residues MLSGVGIVSVTRPDLVLVTRLKVVSVTCRYHVGMSSVRRWRFWV >Mature_44_residues MLSGVGIVSVTRPDLVLVTRLKVVSVTCRYHVGMSSVRRWRFWV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5047; Mature: 5047
Theoretical pI: Translated: 12.21; Mature: 12.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSGVGIVSVTRPDLVLVTRLKVVSVTCRYHVGMSSVRRWRFWV CCCCCEEEEECCCCEEEEEEEEEEEEEEEEECCCCHHCEEECCC >Mature Secondary Structure MLSGVGIVSVTRPDLVLVTRLKVVSVTCRYHVGMSSVRRWRFWV CCCCCEEEEECCCCEEEEEEEEEEEEEEEEECCCCHHCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA