Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110678898

Identifier: 110678898

GI number: 110678898

Start: 1538334

End: 1538528

Strand: Direct

Name: 110678898

Synonym: RD1_1592

Alternate gene names: NA

Gene position: 1538334-1538528 (Clockwise)

Preceding gene: 110678897

Following gene: 110678899

Centisome position: 37.22

GC content: 58.46

Gene sequence:

>195_bases
GTGGAGGGCACTCCTGTGATGATCCGAAGTGTTGCGGTGTTGGTTTTGATCGGTACGCTATCCGCCTGTGGTGTGGATGG
TGAGCCGGTGCGCCCGTCCGTCGGAGCATCCGTCGCGATTGGCTCAGGTGGCGTGAACTCGAACATCGGTGTCGGTCTGA
ACCAAGGCCCGTTTTCGATATTTCTGGGGCTGTAA

Upstream 100 bases:

>100_bases
CGGGGGATGTCTTTGATGTGCTCGGGGTGGAAAACTCGGTTCAAAGCCGTATATCATACGGTGGAACGGCACCCGTGCGG
GTGCGCGAACAAATCGCTCG

Downstream 100 bases:

>100_bases
CGCGCGTGATCAAGCTGCTCGCCTTGGTATCATGCGTTGCGCTCTTGTCCGCCTGTACGGGGACACAGCGTCAGCCCGCA
TCCAAACCGACATCTGAGCC

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 64

Protein sequence:

>64_residues
MEGTPVMIRSVAVLVLIGTLSACGVDGEPVRPSVGASVAIGSGGVNSNIGVGLNQGPFSIFLGL

Sequences:

>Translated_64_residues
MEGTPVMIRSVAVLVLIGTLSACGVDGEPVRPSVGASVAIGSGGVNSNIGVGLNQGPFSIFLGL
>Mature_64_residues
MEGTPVMIRSVAVLVLIGTLSACGVDGEPVRPSVGASVAIGSGGVNSNIGVGLNQGPFSIFLGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6239; Mature: 6239

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGTPVMIRSVAVLVLIGTLSACGVDGEPVRPSVGASVAIGSGGVNSNIGVGLNQGPFSI
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEE
FLGL
EEEC
>Mature Secondary Structure
MEGTPVMIRSVAVLVLIGTLSACGVDGEPVRPSVGASVAIGSGGVNSNIGVGLNQGPFSI
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEE
FLGL
EEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA