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The map label for this gene is exoT [H]

Identifier: 110678885

GI number: 110678885

Start: 1500548

End: 1501972

Strand: Direct

Name: exoT [H]

Synonym: RD1_1579

Alternate gene names: 110678885

Gene position: 1500548-1501972 (Clockwise)

Preceding gene: 110678884

Following gene: 110678887

Centisome position: 36.31

GC content: 61.12

Gene sequence:

>1425_bases
ATGAGCCTGCGCCGGGCGATACGCGACCGGATACTGAGCCGCCCGGCCGTTCTGGCCGCCCATGCGGTGACGCTGTTGGT
TCTGTCCCGCCTGTTGACACCCGCCGAATTCGGTTTGTTTGCCCTTGCCGCTGTCGCCCATCAGATTGCGGTTGCTCTGG
CTGATCTGGGTATCAAGACCCAGTTGCTGAACAGCCCGTCGCTGGACCCCCACCGCCATGGTGAGGCTTTCGGCCTCGCG
CTGACCGCTGCCTGTGTCGTCGCGGCGGGTTTTCTGGGGGTTGCGTTGCTGTTGCCCGACGCGCTCGCCCCCCCATCGCT
GGACGCGACACTGTGGATATTCGCAGCCGCGGTTCTGCTTGGCCCGCTGGAGTTGCTGTTCAACATTCCGCTCATGCAGA
GCATGCGCTTCGGGTTGATTTCCGTGGTCAACGTGTTCGGCGCATGGATCCGCTGCGGCGTCTCGATCATCGCGGCACTC
TACGGGGCTGGTCCGGCTGCACTCGCGGCGGGGCTGCTGGCGGAGCAGATCGTCTCCTTTGCCATGTTTGCAATTGCCAG
ACGCAACGAGCAGGTACCGGCCCCGCGCATGACCGGCTGGCGCAGGTTGATCGAAGACGGCGCGCGCCTGAGCGGAAATC
AGGTTATCCGCCATCTGAGCGAGTTGGGCCTGATGGGCGCAATTTCCGGCTTTCTCGGCGTTGCAACGCTCGGGGTCTAC
AACCGTGCGGATCAGGTCGTGAAGCTGTTTGACAAGATATTCCTCAACAGCTTCAGCCCGGTGATCCACCCGGCGTTTGT
GCAGGCGATCAAGGACAAGCATGACCCGGCAACGATCTATCTCAAGAAGGTAGAGTTGTTGACCGCCCTGATCTGGCCGG
CCTTTGCGATGATCGCCATCCTTGCGGACCCGCTGTGTCGCGTGGTGCTGGGACCGGGGTGGGATGCAGCCCCTGTTGTC
GTGCAACTGCTGGCGTTGATCGGCATCGCGCGGCCTTTCACGCAGATGAATCAGGCGCTTTTCATTGCCTTGGGTGAATT
GCGCCTGAGCACGCGGCTTGATGTGCAGCATCACATCACGCGGGTGGCGCTGGCCAGTTGTGGTGCGTTGATTTCCCTTG
AAGCGGTCTGCATCGCCCTCGCGATGTCAGGTGTGATCGACGCCATACGCCAGACCCGCGCCTTCGCGCGCTCCACGGGC
TATGAAAAGCGCCAACTGTTCAACGTGGCCTTGAACGCGTTTTTGCTCACGCTGTGCACAGTTGCGCCCGCTGCCCTGGC
CTTGAGTTTTGTATCCACCGGCAGCGTCTTTCTGGAACTTATTCTATCTGCATCAGCCGGTGCTGTCGGGTTTGTTTTGG
CGGTCTGCGTAATGCGCAATGTGCTGTTTCATGAGGCGCAAAAGGCGCTCAAACGTATCTTCTGA

Upstream 100 bases:

>100_bases
CAGCCAGTCATCGGAGCGCTCAAGTATCGGATGCCGTGCGCGCCTTCCCTCAAATGGGCGGTCGTGCCTATGGTCGCGCC
ATGCTGCCGCGTTACACCTC

Downstream 100 bases:

>100_bases
GCACCCGCGATCCCTTGGTTTGAACCAAAGGGCGCGCCCCTTATGACCGCAAACGCTTGCGCAGGCGGCTCACCCCGCGC
CACAGGGCCGGCGGCAGGAC

Product: polysaccharide biosynthesis protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 474; Mature: 473

Protein sequence:

>474_residues
MSLRRAIRDRILSRPAVLAAHAVTLLVLSRLLTPAEFGLFALAAVAHQIAVALADLGIKTQLLNSPSLDPHRHGEAFGLA
LTAACVVAAGFLGVALLLPDALAPPSLDATLWIFAAAVLLGPLELLFNIPLMQSMRFGLISVVNVFGAWIRCGVSIIAAL
YGAGPAALAAGLLAEQIVSFAMFAIARRNEQVPAPRMTGWRRLIEDGARLSGNQVIRHLSELGLMGAISGFLGVATLGVY
NRADQVVKLFDKIFLNSFSPVIHPAFVQAIKDKHDPATIYLKKVELLTALIWPAFAMIAILADPLCRVVLGPGWDAAPVV
VQLLALIGIARPFTQMNQALFIALGELRLSTRLDVQHHITRVALASCGALISLEAVCIALAMSGVIDAIRQTRAFARSTG
YEKRQLFNVALNAFLLTLCTVAPAALALSFVSTGSVFLELILSASAGAVGFVLAVCVMRNVLFHEAQKALKRIF

Sequences:

>Translated_474_residues
MSLRRAIRDRILSRPAVLAAHAVTLLVLSRLLTPAEFGLFALAAVAHQIAVALADLGIKTQLLNSPSLDPHRHGEAFGLA
LTAACVVAAGFLGVALLLPDALAPPSLDATLWIFAAAVLLGPLELLFNIPLMQSMRFGLISVVNVFGAWIRCGVSIIAAL
YGAGPAALAAGLLAEQIVSFAMFAIARRNEQVPAPRMTGWRRLIEDGARLSGNQVIRHLSELGLMGAISGFLGVATLGVY
NRADQVVKLFDKIFLNSFSPVIHPAFVQAIKDKHDPATIYLKKVELLTALIWPAFAMIAILADPLCRVVLGPGWDAAPVV
VQLLALIGIARPFTQMNQALFIALGELRLSTRLDVQHHITRVALASCGALISLEAVCIALAMSGVIDAIRQTRAFARSTG
YEKRQLFNVALNAFLLTLCTVAPAALALSFVSTGSVFLELILSASAGAVGFVLAVCVMRNVLFHEAQKALKRIF
>Mature_473_residues
SLRRAIRDRILSRPAVLAAHAVTLLVLSRLLTPAEFGLFALAAVAHQIAVALADLGIKTQLLNSPSLDPHRHGEAFGLAL
TAACVVAAGFLGVALLLPDALAPPSLDATLWIFAAAVLLGPLELLFNIPLMQSMRFGLISVVNVFGAWIRCGVSIIAALY
GAGPAALAAGLLAEQIVSFAMFAIARRNEQVPAPRMTGWRRLIEDGARLSGNQVIRHLSELGLMGAISGFLGVATLGVYN
RADQVVKLFDKIFLNSFSPVIHPAFVQAIKDKHDPATIYLKKVELLTALIWPAFAMIAILADPLCRVVLGPGWDAAPVVV
QLLALIGIARPFTQMNQALFIALGELRLSTRLDVQHHITRVALASCGALISLEAVCIALAMSGVIDAIRQTRAFARSTGY
EKRQLFNVALNAFLLTLCTVAPAALALSFVSTGSVFLELILSASAGAVGFVLAVCVMRNVLFHEAQKALKRIF

Specific function: Lipopolysaccharide biosynthesis. [C]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 50490; Mature: 50359

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLRRAIRDRILSRPAVLAAHAVTLLVLSRLLTPAEFGLFALAAVAHQIAVALADLGIKT
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHH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HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8226645; 8226646; 8118055; 11481431 [H]