Click here to switch to the map view.

The map label for this gene is nosD [H]

Identifier: 110678856

GI number: 110678856

Start: 1473333

End: 1474580

Strand: Direct

Name: nosD [H]

Synonym: RD1_1548

Alternate gene names: 110678856

Gene position: 1473333-1474580 (Clockwise)

Preceding gene: 110678855

Following gene: 110678857

Centisome position: 35.65

GC content: 61.22

Gene sequence:

>1248_bases
ATGCGGTTGCTCAAGGCGTTCCTGTTCCTTTTGATGACATTGGCAGGCCCTGTGTTTGCCAGCGGGACGCCTTTGCAGCC
ACTGGTTGACGCCACAGCACCGGGCGCGGTGTTGCGGCTCGCACCGGGCCAGTATGTTGGCCCGGTGCACCTTGCGCACC
CTGTGACCGTGATCGGCGGGCCGGGCGTGCATCTGGACGGGGGCGGGCAGGGTACGGTCCTCACGGTCGATGCTGAGGGC
GTGCGGGTCGAGGGCCTGCGCCTCACCGGCTCCGGTGACAGTCACGAGACCAAGGACGCCGGCATCACCCTGACCAAGGC
CGCCACCGGTGCAGTGATCGAGGGCAATCTGTTGCAGGGCAACCTTTATGGGATCGACGTGCACGGCGCGCGCGATGCGA
TGATTGCGCGCAATGTGATCGAAGGCCGTCAGGGCCACCGGATGAACCAGCGCGGCAATGGCATCTATGTCTGGAACGCG
CCCGGCACGGTGATTGAGGGCAATGATATCCGCTGGGGGCGGGACGGGATTTTCGTCAATACCTCAAAACGCAATGTGTT
CCGGGGCAACCGGTTCCGCGATCTGCGCTTTGCGGTGCATTACATGTATGCCAATGACAGCGAGGTCAGCGGTAACCTGT
CGATGGGCAACCATCTGGGCTTTGCGGTGATGTATTCGAAAAAAGTGCGGGTGCTGGATAACGTCTCCATCGGGGATCGG
GATCACGGCGTGATGCTGAACTTCACCAACCGTTCCGTGGTGCGGGGCAATTACGTGCAGGATGGGGCCAAGAAATGCCT
CTTTGTCTATAACGCGCATAAGAACGAAATTGTGGACAATCGGTTTGAGCGGTGCGGCATCGGCATCCATTTCACCGCCG
GCTCCGAACGCAATGATGTGACGGGCAACGCTTTTGTCGGCAACCGCACGCAGGTCAAATATGTCTCCACCAAGTGGCTG
GACTGGGCGGCGGAAGGGCGGGGCAATTACTGGTCTGATTTTGTCGCGACTGATCTGGATGGCAACGGGATCGCCGATGG
CACCTACCGGCCCAACGACAGCATTGACCAGATGCTCTGGCAACAGCCTGCCGCGCGCTTGTTGCTCGGATCACCTGCGG
TGCAGCTTGTGCAATGGGCGCAATCGGCCTTTCCCGCGTTGACGCCGGGTGGTGTCATGGACAGCGCCCCGCTGATGCGC
CCGGTTGAGATCGCCGTGCCGGATTGGGGGAAATCCTATGGGGGATGA

Upstream 100 bases:

>100_bases
TCGCCCCGGCGTGCATTGGTACTACTGCCAGTGGTTCTGCCATGCGCTGCATATGGAGATGCGCGGCCGCATGTTTGTCG
AACCAAGGGCGACCTGATCC

Downstream 100 bases:

>100_bases
TGTGGTTCTGGATGTGCGTGGTTTGACCCGCCGTTTCAAGGGCGCGGATGGTGTGGGCAATGTGTCGCTGAGCGTCAGGG
CCGGCGAACGGGTCGCACTG

Product: nitrous oxide maturation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MRLLKAFLFLLMTLAGPVFASGTPLQPLVDATAPGAVLRLAPGQYVGPVHLAHPVTVIGGPGVHLDGGGQGTVLTVDAEG
VRVEGLRLTGSGDSHETKDAGITLTKAATGAVIEGNLLQGNLYGIDVHGARDAMIARNVIEGRQGHRMNQRGNGIYVWNA
PGTVIEGNDIRWGRDGIFVNTSKRNVFRGNRFRDLRFAVHYMYANDSEVSGNLSMGNHLGFAVMYSKKVRVLDNVSIGDR
DHGVMLNFTNRSVVRGNYVQDGAKKCLFVYNAHKNEIVDNRFERCGIGIHFTAGSERNDVTGNAFVGNRTQVKYVSTKWL
DWAAEGRGNYWSDFVATDLDGNGIADGTYRPNDSIDQMLWQQPAARLLLGSPAVQLVQWAQSAFPALTPGGVMDSAPLMR
PVEIAVPDWGKSYGG

Sequences:

>Translated_415_residues
MRLLKAFLFLLMTLAGPVFASGTPLQPLVDATAPGAVLRLAPGQYVGPVHLAHPVTVIGGPGVHLDGGGQGTVLTVDAEG
VRVEGLRLTGSGDSHETKDAGITLTKAATGAVIEGNLLQGNLYGIDVHGARDAMIARNVIEGRQGHRMNQRGNGIYVWNA
PGTVIEGNDIRWGRDGIFVNTSKRNVFRGNRFRDLRFAVHYMYANDSEVSGNLSMGNHLGFAVMYSKKVRVLDNVSIGDR
DHGVMLNFTNRSVVRGNYVQDGAKKCLFVYNAHKNEIVDNRFERCGIGIHFTAGSERNDVTGNAFVGNRTQVKYVSTKWL
DWAAEGRGNYWSDFVATDLDGNGIADGTYRPNDSIDQMLWQQPAARLLLGSPAVQLVQWAQSAFPALTPGGVMDSAPLMR
PVEIAVPDWGKSYGG
>Mature_415_residues
MRLLKAFLFLLMTLAGPVFASGTPLQPLVDATAPGAVLRLAPGQYVGPVHLAHPVTVIGGPGVHLDGGGQGTVLTVDAEG
VRVEGLRLTGSGDSHETKDAGITLTKAATGAVIEGNLLQGNLYGIDVHGARDAMIARNVIEGRQGHRMNQRGNGIYVWNA
PGTVIEGNDIRWGRDGIFVNTSKRNVFRGNRFRDLRFAVHYMYANDSEVSGNLSMGNHLGFAVMYSKKVRVLDNVSIGDR
DHGVMLNFTNRSVVRGNYVQDGAKKCLFVYNAHKNEIVDNRFERCGIGIHFTAGSERNDVTGNAFVGNRTQVKYVSTKWL
DWAAEGRGNYWSDFVATDLDGNGIADGTYRPNDSIDQMLWQQPAARLLLGSPAVQLVQWAQSAFPALTPGGVMDSAPLMR
PVEIAVPDWGKSYGG

Specific function: Involved in copper processing and transport; in the assembly of the copper chromophores of nitrous oxide reductase [H]

COG id: COG3420

COG function: function code P; Nitrous oxidase accessory protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006633
- InterPro:   IPR007742
- InterPro:   IPR022441
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050 [H]

Pfam domain/function: PF05048 NosD [H]

EC number: NA

Molecular weight: Translated: 44862; Mature: 44862

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLKAFLFLLMTLAGPVFASGTPLQPLVDATAPGAVLRLAPGQYVGPVHLAHPVTVIGG
CHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCEEEEECCCCCCCCEEECCCEEEEEC
PGVHLDGGGQGTVLTVDAEGVRVEGLRLTGSGDSHETKDAGITLTKAATGAVIEGNLLQG
CCEEECCCCCEEEEEEECCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEECCEEEC
NLYGIDVHGARDAMIARNVIEGRQGHRMNQRGNGIYVWNAPGTVIEGNDIRWGRDGIFVN
EEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEECCCCEEECCCCEEEE
TSKRNVFRGNRFRDLRFAVHYMYANDSEVSGNLSMGNHLGFAVMYSKKVRVLDNVSIGDR
CCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCC
DHGVMLNFTNRSVVRGNYVQDGAKKCLFVYNAHKNEIVDNRFERCGIGIHFTAGSERNDV
CCCEEEEECCCCEEECCCHHCCCCEEEEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCC
TGNAFVGNRTQVKYVSTKWLDWAAEGRGNYWSDFVATDLDGNGIADGTYRPNDSIDQMLW
CCCEEECCCEEEEEEEEEEEEEEECCCCCEECCEEEECCCCCCCCCCCCCCCCHHHHHHH
QQPAARLLLGSPAVQLVQWAQSAFPALTPGGVMDSAPLMRPVEIAVPDWGKSYGG
HCCHHHEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MRLLKAFLFLLMTLAGPVFASGTPLQPLVDATAPGAVLRLAPGQYVGPVHLAHPVTVIGG
CHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCEEEEECCCCCCCCEEECCCEEEEEC
PGVHLDGGGQGTVLTVDAEGVRVEGLRLTGSGDSHETKDAGITLTKAATGAVIEGNLLQG
CCEEECCCCCEEEEEEECCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEECCEEEC
NLYGIDVHGARDAMIARNVIEGRQGHRMNQRGNGIYVWNAPGTVIEGNDIRWGRDGIFVN
EEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEECCCCEEECCCCEEEE
TSKRNVFRGNRFRDLRFAVHYMYANDSEVSGNLSMGNHLGFAVMYSKKVRVLDNVSIGDR
CCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCC
DHGVMLNFTNRSVVRGNYVQDGAKKCLFVYNAHKNEIVDNRFERCGIGIHFTAGSERNDV
CCCEEEEECCCCEEECCCHHCCCCEEEEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCC
TGNAFVGNRTQVKYVSTKWLDWAAEGRGNYWSDFVATDLDGNGIADGTYRPNDSIDQMLW
CCCEEECCCEEEEEEEEEEEEEEECCCCCEECCEEEECCCCCCCCCCCCCCCCHHHHHHH
QQPAARLLLGSPAVQLVQWAQSAFPALTPGGVMDSAPLMRPVEIAVPDWGKSYGG
HCCHHHEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]