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The map label for this gene is soxS

Identifier: 110678820

GI number: 110678820

Start: 1432789

End: 1433157

Strand: Reverse

Name: soxS

Synonym: RD1_1508

Alternate gene names: NA

Gene position: 1433157-1432789 (Counterclockwise)

Preceding gene: 110678834

Following gene: 110678819

Centisome position: 34.68

GC content: 57.45

Gene sequence:

>369_bases
ATGTTCCTTCGCGCCCTCCTTTTTTCGAGCCTGCTGGTTTTGGCCGGTACGTATCCTGTTCTGGCGGACACACGGCTGGT
GATGGTGGAGGAAAAGGGTTGCATCTGGTGCGCCCGCTGGAATGAGGAAATCGCGGATATCTATCCGAAAACCGGCGAAG
GAAAAGCCGCGCCGCTGCAGCGTATGGACATCCACGCGCCGCGACCCGAGAGGCTCAGCTTTGCGCGCGCGCTGCATTAC
ACCCCGACGTTCGTGCTGATGGTGGATGGCGTGGAAGTGTCGCGCATCGAAGGCTATCCGGGCGAAGATTTCTTCTGGGG
CCTGTTGGCGCAAATGCTCGTTAACGCAAATATTGCCATACTTGAATAA

Upstream 100 bases:

>100_bases
GGCAGCGCCCAGAAAGGTGATATCCATCATGACAACGCCCGAGCCTTGTATTATTCACATATTCATATTACGTTATTTGT
AGATTAAAGGTCAATTTGAC

Downstream 100 bases:

>100_bases
AATACCGGGCTGCGGCGCAATAGGCCGTTGAAGGAAAGGTCAGGCCCCCTTATGAACAAACAAACCCCGGCTGTTGAAGC
CGATACAAATTCCAGCATCG

Product: SoxS

Products: NA

Alternate protein names: Thioredoxin

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MFLRALLFSSLLVLAGTYPVLADTRLVMVEEKGCIWCARWNEEIADIYPKTGEGKAAPLQRMDIHAPRPERLSFARALHY
TPTFVLMVDGVEVSRIEGYPGEDFFWGLLAQMLVNANIAILE

Sequences:

>Translated_122_residues
MFLRALLFSSLLVLAGTYPVLADTRLVMVEEKGCIWCARWNEEIADIYPKTGEGKAAPLQRMDIHAPRPERLSFARALHY
TPTFVLMVDGVEVSRIEGYPGEDFFWGLLAQMLVNANIAILE
>Mature_122_residues
MFLRALLFSSLLVLAGTYPVLADTRLVMVEEKGCIWCARWNEEIADIYPKTGEGKAAPLQRMDIHAPRPERLSFARALHY
TPTFVLMVDGVEVSRIEGYPGEDFFWGLLAQMLVNANIAILE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13757; Mature: 13757

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLRALLFSSLLVLAGTYPVLADTRLVMVEEKGCIWCARWNEEIADIYPKTGEGKAAPLQ
CHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEECCCCHHHHCCCCCCCCCCCCCC
RMDIHAPRPERLSFARALHYTPTFVLMVDGVEVSRIEGYPGEDFFWGLLAQMLVNANIAI
CCCCCCCCCHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCEEE
LE
EC
>Mature Secondary Structure
MFLRALLFSSLLVLAGTYPVLADTRLVMVEEKGCIWCARWNEEIADIYPKTGEGKAAPLQ
CHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEECCCCHHHHCCCCCCCCCCCCCC
RMDIHAPRPERLSFARALHYTPTFVLMVDGVEVSRIEGYPGEDFFWGLLAQMLVNANIAI
CCCCCCCCCHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCEEE
LE
EC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA