Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110678811

Identifier: 110678811

GI number: 110678811

Start: 1425015

End: 1425824

Strand: Direct

Name: 110678811

Synonym: RD1_1499

Alternate gene names: NA

Gene position: 1425015-1425824 (Clockwise)

Preceding gene: 110678805

Following gene: 110678812

Centisome position: 34.48

GC content: 61.23

Gene sequence:

>810_bases
TTGACTCAATCAAACGCCATCGACGCGTCACATGCGCGAAATGCACGCCAGGGGACTGGTCCGCTGTTGGGTGCGCAGGA
TCCCGCGCCAATTGAAGTGTGCCATGCGGAGTCCGCCGCGCCGTTGCTGCTGTTGTGTGAACATGCCGGTCAGGTCGTGC
CGCAAGCCTTGGGCGGTTTGGGGTTGCCTGAGGGGGCAATAGACGGGCACATCGGCTGGGACATCGGTGCGGAAAAGCTG
GCCCGTGCGCTCGCGGAACGGCTGCAGTGCCCGCTGATCCTGCAACGCTACAGCCGCCTTGTGATTGACTGCAATCGGCC
GCCCGGGTCCGAAGGGTCCATTCCGACGCTCAGCGATGATGTGCCTGTGCCGGGAAACATGGGGCTGACGGCCCATGACC
GTCATCTGCGCCAGCAAGAGATTTTTGATCCGATGAACGATGCGATCACTGCTGCTTTTGAAACGCACCCCCGGCATACG
GTGTTTTCCATCCATTCCTACACGCGCCACTTTCAGGGCGAAGACAGGCAGTGGGATGCGGGGTTTCTGACCCGGCAGGA
TGTAAAGACCGCGCAGGGTCTGATGTCGTCGATCTCAAACGCCGCGCCGGAACTGACACTGGCCCTGAACCAACCCTATC
AGATTGATGACGCCAGTGATTGGTTCATCCCCCAGCACGCCGAGGCACGTCGGTTGCAACACGCGTTGATCGAGGTGCGC
AACGATCATTTGCGCGATGCTGACGGTGTGGCGCGCTGGGCCGGTCTGTTGGCCCCTGCGATCCGGTCCATTCTGGAGGA
TACCCCATGA

Upstream 100 bases:

>100_bases
GTTAGGTATAGCGTGAGTGAAAAAATAATTTCAGTCAATTCAATTCTCTTGACTTTGGAAGTTTTCATTCGTCTACTTTC
TGCAACTTGTGGGGAACGCC

Downstream 100 bases:

>100_bases
CCCTGACCCGAAATGTGCCCCTGGTTCCAGAGCAATCCGCGCTGTTGTTCATTGACGTGCAGAACTTTGCCGCGCACCGC
GAAGGCGGTGAATTCAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: N-Formylglutamate Amidohydrolase Family Protein; N-Formylglutamate Amidohydrolase Protein; N-Formylglutamate Amidohydrolase Superfamily; Cytoplasmic Protein; Hydrolase

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MTQSNAIDASHARNARQGTGPLLGAQDPAPIEVCHAESAAPLLLLCEHAGQVVPQALGGLGLPEGAIDGHIGWDIGAEKL
ARALAERLQCPLILQRYSRLVIDCNRPPGSEGSIPTLSDDVPVPGNMGLTAHDRHLRQQEIFDPMNDAITAAFETHPRHT
VFSIHSYTRHFQGEDRQWDAGFLTRQDVKTAQGLMSSISNAAPELTLALNQPYQIDDASDWFIPQHAEARRLQHALIEVR
NDHLRDADGVARWAGLLAPAIRSILEDTP

Sequences:

>Translated_269_residues
MTQSNAIDASHARNARQGTGPLLGAQDPAPIEVCHAESAAPLLLLCEHAGQVVPQALGGLGLPEGAIDGHIGWDIGAEKL
ARALAERLQCPLILQRYSRLVIDCNRPPGSEGSIPTLSDDVPVPGNMGLTAHDRHLRQQEIFDPMNDAITAAFETHPRHT
VFSIHSYTRHFQGEDRQWDAGFLTRQDVKTAQGLMSSISNAAPELTLALNQPYQIDDASDWFIPQHAEARRLQHALIEVR
NDHLRDADGVARWAGLLAPAIRSILEDTP
>Mature_268_residues
TQSNAIDASHARNARQGTGPLLGAQDPAPIEVCHAESAAPLLLLCEHAGQVVPQALGGLGLPEGAIDGHIGWDIGAEKLA
RALAERLQCPLILQRYSRLVIDCNRPPGSEGSIPTLSDDVPVPGNMGLTAHDRHLRQQEIFDPMNDAITAAFETHPRHTV
FSIHSYTRHFQGEDRQWDAGFLTRQDVKTAQGLMSSISNAAPELTLALNQPYQIDDASDWFIPQHAEARRLQHALIEVRN
DHLRDADGVARWAGLLAPAIRSILEDTP

Specific function: Unknown

COG id: COG3931

COG function: function code E; Predicted N-formylglutamate amidohydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29312; Mature: 29181

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSNAIDASHARNARQGTGPLLGAQDPAPIEVCHAESAAPLLLLCEHAGQVVPQALGGL
CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCC
GLPEGAIDGHIGWDIGAEKLARALAERLQCPLILQRYSRLVIDCNRPPGSEGSIPTLSDD
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHEEEECCCCCCCCCCCCCCCCC
VPVPGNMGLTAHDRHLRQQEIFDPMNDAITAAFETHPRHTVFSIHSYTRHFQGEDRQWDA
CCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCCCCCCC
GFLTRQDVKTAQGLMSSISNAAPELTLALNQPYQIDDASDWFIPQHAEARRLQHALIEVR
CCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHHHHH
NDHLRDADGVARWAGLLAPAIRSILEDTP
HHHCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TQSNAIDASHARNARQGTGPLLGAQDPAPIEVCHAESAAPLLLLCEHAGQVVPQALGGL
CCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCC
GLPEGAIDGHIGWDIGAEKLARALAERLQCPLILQRYSRLVIDCNRPPGSEGSIPTLSDD
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHEEEECCCCCCCCCCCCCCCCC
VPVPGNMGLTAHDRHLRQQEIFDPMNDAITAAFETHPRHTVFSIHSYTRHFQGEDRQWDA
CCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCCCCCCC
GFLTRQDVKTAQGLMSSISNAAPELTLALNQPYQIDDASDWFIPQHAEARRLQHALIEVR
CCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHHHHH
NDHLRDADGVARWAGLLAPAIRSILEDTP
HHHCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA