BacMap

Definition	Roseobacter denitrificans OCh 114, complete genome.
Accession	NC_008209
Length	4,133,097

Click here to switch to the map view.

The map label for this gene is lcfB [H]

Identifier: 110678786

GI number: 110678786

Start: 1398117

End: 1399634

Strand: Reverse

Name: lcfB [H]

Synonym: RD1_1474

Alternate gene names: 110678786

Gene position: 1399634-1398117 (Counterclockwise)

Preceding gene: 110678787

Following gene: 110678782

Centisome position: 33.86

GC content: 56.46

Gene sequence:

>1518_bases
ATGGCAAACCCTCTCTATGATACATTTTTCGGGCGTCATCAGGGAAAGGAGACCCCTTTTCTGGAATTGGTGGATGGTGC
AACGATCAACCACAAGGCGTATCTTGAGTTGGCCGCGCAATATGCGCATGTATTGACGCACCTCGGGGTTCAGCCGGGGG
AGCGGATTGCAGTTCAGATTGCAAAATCCCCCCAGGCGCTGGCCATCTACGCCGCATGCGTCCAAGCCGGGATCGTGTTT
CTGCCCTTGAACACGGCCTATACGGCAGATGAGGTATCGTATTTTGTGCAAAACAGCGGCGCGCGGGTCATCCTGTGCGA
TGGCCGTAGATACGACGCCCTGACGCCCATTGCGCAAACAACCGGTGCTGTGCTTGAAACGATGAACAGTGATGGCAGCG
GCAGTTTTGCATCAAGGGCCGAGGGCATGCCCACCACCTTTGAAACAGTCGCGCGATCAGAAGACGATCTGGCCGCATTT
CTCTATACTTCCGGCACAACGGGGCGGTCCAAGGGGGCGATGCTCACCCAAGGCAACCTGCTTTCCAACAGCAAGGTGTT
GACCTCTGAATGGGCGTTTACCTCAAAAGACGTTCTGCTGCATGCGCTGCCAATTTTTCACACTCATGGGCTTTTTGTGG
CGACAAACATATCGCTGTTTGCGGGCTGCAAAATGGTCTTCATGCCGAAATTCGATCTCGACGTCGTCCTTGATCGGATG
CCGACGGCCACAGTCATGATGGGCGTTCCGACCTTTTACACCCGCCTGCTGGAGGACCCTCGGTTCACCAAGAACGTGGC
GCAAAACATGCGGCTGTTCATATCTGGCAGTGCGCCGCTGCTCGCAGAGACCCATGTACAGTTTGAAAAACGCACCGGCC
ACCGCATTCTCGAACGCTACGGCATGACCGAGACGAATATGAATACCTCCAACCCATACGCCGGCGAACGCCGGGCGGGG
ACCGTAGGCTTTCCCCTTCCGGGCGTCGAACTCAAGATCACCGATAGCAAAACCGGTGCCACGCTGCCGCAGGGCGAGAT
CGGGCAGATCGAGGTGCGCGGGCCCAACGTATTCAAGGGCTATTGGCAGATGCCGGAAAAAACCGCCGAAGAGTTGCGGG
AGAACGGTTTTTTCATCACCGGCGACCTCGGGCAGATTGATCAGGATGGCTATTTGCACATCGTCGGGCGCAACAAGGAT
CTGATCATCTCCGGCGGCTACAACATCTATCCCAAAGAAATCGAGCTTTTGCTCGATCGCGAAGCAGGCGTTCTGGAAAG
CGCTGTCATCGGTGTTCCGCATCCCGATTTTGGCGAGACTGTCGTGGGCATTCTCGTGGCTGAGCCCGGTGCAGAACCCG
ACCTTGATGCCATCAAGCAAAATATCAGCGCATCACTGGCGCGCTTCAAGCACCCTCAAAAACTGATCGTACTGCCGGAA
CTGCCACGCAACACGATGGGCAAGGTGCAAAAGAAGGCGCTGCGCGCGCAATTCCAGGATCTGTTCGCGCCCGCTTGA

Upstream 100 bases:

>100_bases
CGCAAAACCACGAGAAATTCGTCGGTGACAAGATCGTCGTCGCCTCCACAACCGTCAAAGCACTCAGCGGATCAGTGACC
ACAAGTTTAGGAACCTGAAC

Downstream 100 bases:

>100_bases
AGATGCCGAATGTGCCCGTGGCAGCCTGCGGGCACCATCGGGCCGCCTCCTCGCGGTCAAGGCCGCTACCCCGCACGACA
TGTCGCTCATGCCAGCCGAC

Product: malonyl-CoA synthase

Products: NA

Alternate protein names: Long-chain acyl-CoA synthetase [H]

Number of amino acids: Translated: 505; Mature: 504

Protein sequence:

>505_residues
MANPLYDTFFGRHQGKETPFLELVDGATINHKAYLELAAQYAHVLTHLGVQPGERIAVQIAKSPQALAIYAACVQAGIVF
LPLNTAYTADEVSYFVQNSGARVILCDGRRYDALTPIAQTTGAVLETMNSDGSGSFASRAEGMPTTFETVARSEDDLAAF
LYTSGTTGRSKGAMLTQGNLLSNSKVLTSEWAFTSKDVLLHALPIFHTHGLFVATNISLFAGCKMVFMPKFDLDVVLDRM
PTATVMMGVPTFYTRLLEDPRFTKNVAQNMRLFISGSAPLLAETHVQFEKRTGHRILERYGMTETNMNTSNPYAGERRAG
TVGFPLPGVELKITDSKTGATLPQGEIGQIEVRGPNVFKGYWQMPEKTAEELRENGFFITGDLGQIDQDGYLHIVGRNKD
LIISGGYNIYPKEIELLLDREAGVLESAVIGVPHPDFGETVVGILVAEPGAEPDLDAIKQNISASLARFKHPQKLIVLPE
LPRNTMGKVQKKALRAQFQDLFAPA

Sequences:

>Translated_505_residues
MANPLYDTFFGRHQGKETPFLELVDGATINHKAYLELAAQYAHVLTHLGVQPGERIAVQIAKSPQALAIYAACVQAGIVF
LPLNTAYTADEVSYFVQNSGARVILCDGRRYDALTPIAQTTGAVLETMNSDGSGSFASRAEGMPTTFETVARSEDDLAAF
LYTSGTTGRSKGAMLTQGNLLSNSKVLTSEWAFTSKDVLLHALPIFHTHGLFVATNISLFAGCKMVFMPKFDLDVVLDRM
PTATVMMGVPTFYTRLLEDPRFTKNVAQNMRLFISGSAPLLAETHVQFEKRTGHRILERYGMTETNMNTSNPYAGERRAG
TVGFPLPGVELKITDSKTGATLPQGEIGQIEVRGPNVFKGYWQMPEKTAEELRENGFFITGDLGQIDQDGYLHIVGRNKD
LIISGGYNIYPKEIELLLDREAGVLESAVIGVPHPDFGETVVGILVAEPGAEPDLDAIKQNISASLARFKHPQKLIVLPE
LPRNTMGKVQKKALRAQFQDLFAPA
>Mature_504_residues
ANPLYDTFFGRHQGKETPFLELVDGATINHKAYLELAAQYAHVLTHLGVQPGERIAVQIAKSPQALAIYAACVQAGIVFL
PLNTAYTADEVSYFVQNSGARVILCDGRRYDALTPIAQTTGAVLETMNSDGSGSFASRAEGMPTTFETVARSEDDLAAFL
YTSGTTGRSKGAMLTQGNLLSNSKVLTSEWAFTSKDVLLHALPIFHTHGLFVATNISLFAGCKMVFMPKFDLDVVLDRMP
TATVMMGVPTFYTRLLEDPRFTKNVAQNMRLFISGSAPLLAETHVQFEKRTGHRILERYGMTETNMNTSNPYAGERRAGT
VGFPLPGVELKITDSKTGATLPQGEIGQIEVRGPNVFKGYWQMPEKTAEELRENGFFITGDLGQIDQDGYLHIVGRNKDL
IISGGYNIYPKEIELLLDREAGVLESAVIGVPHPDFGETVVGILVAEPGAEPDLDAIKQNISASLARFKHPQKLIVLPEL
PRNTMGKVQKKALRAQFQDLFAPA

Specific function: Involved in the degradation of long-chain fatty acids [H]

COG id: COG0318

COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]

Homologues:

Organism=Homo sapiens, GI187761345, Length=484, Percent_Identity=33.2644628099174, Blast_Score=235, Evalue=6e-62,
Organism=Homo sapiens, GI187761343, Length=484, Percent_Identity=33.2644628099174, Blast_Score=235, Evalue=6e-62,
Organism=Homo sapiens, GI38505220, Length=475, Percent_Identity=30.1052631578947, Blast_Score=186, Evalue=4e-47,
Organism=Homo sapiens, GI42544132, Length=487, Percent_Identity=28.1314168377823, Blast_Score=182, Evalue=7e-46,
Organism=Homo sapiens, GI157311624, Length=504, Percent_Identity=27.1825396825397, Blast_Score=176, Evalue=5e-44,
Organism=Homo sapiens, GI157311622, Length=504, Percent_Identity=27.1825396825397, Blast_Score=176, Evalue=5e-44,
Organism=Homo sapiens, GI58082049, Length=506, Percent_Identity=27.8656126482213, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI115511026, Length=490, Percent_Identity=27.9591836734694, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI122937307, Length=483, Percent_Identity=28.7784679089027, Blast_Score=166, Evalue=5e-41,
Organism=Homo sapiens, GI156151445, Length=495, Percent_Identity=26.2626262626263, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI57165410, Length=487, Percent_Identity=25.6673511293634, Blast_Score=125, Evalue=8e-29,
Organism=Homo sapiens, GI42794760, Length=526, Percent_Identity=23.1939163498099, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI42794758, Length=526, Percent_Identity=23.1939163498099, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI42794756, Length=526, Percent_Identity=23.1939163498099, Blast_Score=123, Evalue=5e-28,
Organism=Homo sapiens, GI38524616, Length=526, Percent_Identity=25.0950570342205, Blast_Score=119, Evalue=7e-27,
Organism=Homo sapiens, GI40807491, Length=495, Percent_Identity=23.6363636363636, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI57165412, Length=487, Percent_Identity=24.8459958932238, Blast_Score=114, Evalue=3e-25,
Organism=Homo sapiens, GI195947378, Length=387, Percent_Identity=25.3229974160207, Blast_Score=102, Evalue=9e-22,
Organism=Homo sapiens, GI227499619, Length=502, Percent_Identity=24.9003984063745, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI27477105, Length=481, Percent_Identity=23.7006237006237, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI13325057, Length=519, Percent_Identity=26.9749518304432, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI8923896, Length=538, Percent_Identity=23.6059479553903, Blast_Score=96, Evalue=7e-20,
Organism=Homo sapiens, GI83745141, Length=475, Percent_Identity=22.3157894736842, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI4758332, Length=313, Percent_Identity=26.8370607028754, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI12669909, Length=313, Percent_Identity=26.8370607028754, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI253970489, Length=366, Percent_Identity=26.2295081967213, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI28416953, Length=516, Percent_Identity=23.4496124031008, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI40807357, Length=507, Percent_Identity=22.4852071005917, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI13236579, Length=482, Percent_Identity=23.8589211618257, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI42544134, Length=316, Percent_Identity=22.7848101265823, Blast_Score=83, Evalue=7e-16,
Organism=Escherichia coli, GI145693145, Length=489, Percent_Identity=28.6298568507157, Blast_Score=200, Evalue=2e-52,
Organism=Escherichia coli, GI1788107, Length=500, Percent_Identity=28.4, Blast_Score=192, Evalue=3e-50,
Organism=Escherichia coli, GI221142682, Length=516, Percent_Identity=26.7441860465116, Blast_Score=172, Evalue=6e-44,
Organism=Escherichia coli, GI1786810, Length=510, Percent_Identity=27.0588235294118, Blast_Score=142, Evalue=3e-35,
Organism=Escherichia coli, GI1789201, Length=357, Percent_Identity=28.0112044817927, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1788595, Length=454, Percent_Identity=25.9911894273128, Blast_Score=111, Evalue=1e-25,
Organism=Escherichia coli, GI1790505, Length=526, Percent_Identity=22.8136882129278, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1786801, Length=493, Percent_Identity=24.1379310344828, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1786529, Length=517, Percent_Identity=22.8239845261122, Blast_Score=62, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17558820, Length=499, Percent_Identity=41.6833667334669, Blast_Score=391, Evalue=1e-109,
Organism=Caenorhabditis elegans, GI32563687, Length=474, Percent_Identity=41.5611814345992, Blast_Score=374, Evalue=1e-104,
Organism=Caenorhabditis elegans, GI71994690, Length=504, Percent_Identity=27.1825396825397, Blast_Score=162, Evalue=3e-40,
Organism=Caenorhabditis elegans, GI71994703, Length=504, Percent_Identity=27.1825396825397, Blast_Score=162, Evalue=3e-40,
Organism=Caenorhabditis elegans, GI71994694, Length=504, Percent_Identity=27.1825396825397, Blast_Score=162, Evalue=3e-40,
Organism=Caenorhabditis elegans, GI17531443, Length=489, Percent_Identity=26.1758691206544, Blast_Score=159, Evalue=3e-39,
Organism=Caenorhabditis elegans, GI17560308, Length=518, Percent_Identity=24.9034749034749, Blast_Score=144, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI17557194, Length=486, Percent_Identity=28.1893004115226, Blast_Score=142, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI17538037, Length=484, Percent_Identity=28.099173553719, Blast_Score=136, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI71985884, Length=398, Percent_Identity=28.643216080402, Blast_Score=131, Evalue=9e-31,
Organism=Caenorhabditis elegans, GI17559526, Length=360, Percent_Identity=28.3333333333333, Blast_Score=122, Evalue=6e-28,
Organism=Caenorhabditis elegans, GI25141359, Length=504, Percent_Identity=24.6031746031746, Blast_Score=114, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI71996755, Length=489, Percent_Identity=24.1308793456033, Blast_Score=113, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17560140, Length=480, Percent_Identity=24.7916666666667, Blast_Score=112, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17556552, Length=529, Percent_Identity=23.6294896030246, Blast_Score=112, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI25147511, Length=539, Percent_Identity=24.4897959183673, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17510401, Length=163, Percent_Identity=32.5153374233129, Blast_Score=89, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI115534440, Length=553, Percent_Identity=22.7848101265823, Blast_Score=86, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17541856, Length=358, Percent_Identity=26.536312849162, Blast_Score=82, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17564090, Length=347, Percent_Identity=23.6311239193084, Blast_Score=81, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17553312, Length=309, Percent_Identity=25.5663430420712, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71983001, Length=531, Percent_Identity=22.5988700564972, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI71982997, Length=531, Percent_Identity=22.5988700564972, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI193204819, Length=110, Percent_Identity=33.6363636363636, Blast_Score=65, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6319699, Length=397, Percent_Identity=30.7304785894207, Blast_Score=156, Evalue=7e-39,
Organism=Saccharomyces cerevisiae, GI6319264, Length=527, Percent_Identity=24.6679316888046, Blast_Score=108, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6323182, Length=530, Percent_Identity=23.7735849056604, Blast_Score=104, Evalue=3e-23,
Organism=Saccharomyces cerevisiae, GI6320852, Length=251, Percent_Identity=27.0916334661355, Blast_Score=76, Evalue=1e-14,
Organism=Drosophila melanogaster, GI21355181, Length=508, Percent_Identity=27.5590551181102, Blast_Score=164, Evalue=1e-40,
Organism=Drosophila melanogaster, GI18859661, Length=485, Percent_Identity=25.360824742268, Blast_Score=162, Evalue=5e-40,
Organism=Drosophila melanogaster, GI24581924, Length=527, Percent_Identity=27.134724857685, Blast_Score=158, Evalue=8e-39,
Organism=Drosophila melanogaster, GI24648260, Length=494, Percent_Identity=26.5182186234818, Blast_Score=139, Evalue=6e-33,
Organism=Drosophila melanogaster, GI21356441, Length=482, Percent_Identity=24.6887966804979, Blast_Score=137, Evalue=1e-32,
Organism=Drosophila melanogaster, GI24648255, Length=504, Percent_Identity=23.6111111111111, Blast_Score=130, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24648253, Length=504, Percent_Identity=23.6111111111111, Blast_Score=130, Evalue=2e-30,
Organism=Drosophila melanogaster, GI281366413, Length=526, Percent_Identity=25.8555133079848, Blast_Score=129, Evalue=4e-30,
Organism=Drosophila melanogaster, GI24666501, Length=526, Percent_Identity=25.8555133079848, Blast_Score=129, Evalue=5e-30,
Organism=Drosophila melanogaster, GI24666497, Length=526, Percent_Identity=25.8555133079848, Blast_Score=129, Evalue=5e-30,
Organism=Drosophila melanogaster, GI24648257, Length=448, Percent_Identity=26.5625, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24653035, Length=491, Percent_Identity=24.0325865580448, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI281365686, Length=473, Percent_Identity=22.4101479915433, Blast_Score=122, Evalue=7e-28,
Organism=Drosophila melanogaster, GI24656500, Length=504, Percent_Identity=24.6031746031746, Blast_Score=120, Evalue=3e-27,
Organism=Drosophila melanogaster, GI19922652, Length=495, Percent_Identity=25.2525252525253, Blast_Score=115, Evalue=1e-25,
Organism=Drosophila melanogaster, GI21358303, Length=474, Percent_Identity=22.1518987341772, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI21356947, Length=487, Percent_Identity=25.0513347022587, Blast_Score=112, Evalue=6e-25,
Organism=Drosophila melanogaster, GI161076582, Length=496, Percent_Identity=23.3870967741935, Blast_Score=112, Evalue=9e-25,
Organism=Drosophila melanogaster, GI62471681, Length=425, Percent_Identity=25.6470588235294, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI62471687, Length=425, Percent_Identity=25.6470588235294, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24586634, Length=425, Percent_Identity=25.6470588235294, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI22026970, Length=425, Percent_Identity=25.6470588235294, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI62471679, Length=425, Percent_Identity=25.6470588235294, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI62471683, Length=425, Percent_Identity=25.6470588235294, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI62471685, Length=425, Percent_Identity=25.6470588235294, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24586636, Length=425, Percent_Identity=25.6470588235294, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI62471689, Length=425, Percent_Identity=25.6470588235294, Blast_Score=104, Evalue=2e-22,
Organism=Drosophila melanogaster, GI221329755, Length=502, Percent_Identity=23.1075697211155, Blast_Score=103, Evalue=3e-22,
Organism=Drosophila melanogaster, GI20130357, Length=487, Percent_Identity=23.6139630390144, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI20130353, Length=541, Percent_Identity=23.1053604436229, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI28573631, Length=541, Percent_Identity=23.1053604436229, Blast_Score=100, Evalue=4e-21,
Organism=Drosophila melanogaster, GI17933690, Length=609, Percent_Identity=23.1527093596059, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI19921316, Length=480, Percent_Identity=25.4166666666667, Blast_Score=92, Evalue=6e-19,
Organism=Drosophila melanogaster, GI45552801, Length=411, Percent_Identity=25.7907542579075, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI45550496, Length=411, Percent_Identity=25.7907542579075, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI62472339, Length=535, Percent_Identity=21.8691588785047, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24667955, Length=535, Percent_Identity=21.8691588785047, Blast_Score=88, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24667959, Length=384, Percent_Identity=25, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24583465, Length=512, Percent_Identity=22.4609375, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24583463, Length=512, Percent_Identity=22.4609375, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI281364798, Length=512, Percent_Identity=22.4609375, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24648676, Length=482, Percent_Identity=21.9917012448133, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020459
- InterPro:   IPR020845
- InterPro:   IPR000873 [H]

Pfam domain/function: PF00501 AMP-binding [H]

EC number: =6.2.1.3 [H]

Molecular weight: Translated: 55205; Mature: 55074

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS00455 AMP_BINDING

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANPLYDTFFGRHQGKETPFLELVDGATINHKAYLELAAQYAHVLTHLGVQPGERIAVQI
CCCCCHHHHHCCCCCCCCCCEEEECCCEECHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
AKSPQALAIYAACVQAGIVFLPLNTAYTADEVSYFVQNSGARVILCDGRRYDALTPIAQT
ECCCCHHHHHHHHHHCCEEEEECCCCCCHHHHHHHEECCCCEEEEECCCCCCCCCCHHHH
TGAVLETMNSDGSGSFASRAEGMPTTFETVARSEDDLAAFLYTSGTTGRSKGAMLTQGNL
HHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCEEECCCC
LSNSKVLTSEWAFTSKDVLLHALPIFHTHGLFVATNISLFAGCKMVFMPKFDLDVVLDRM
CCCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHCCEEEEECCCCHHHHHHCC
PTATVMMGVPTFYTRLLEDPRFTKNVAQNMRLFISGSAPLLAETHVQFEKRTGHRILERY
CCEEEEECCHHHHHHHHCCCCHHHHHHCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHHH
GMTETNMNTSNPYAGERRAGTVGFPLPGVELKITDSKTGATLPQGEIGQIEVRGPNVFKG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCEEEH
YWQMPEKTAEELRENGFFITGDLGQIDQDGYLHIVGRNKDLIISGGYNIYPKEIELLLDR
HHCCCHHHHHHHHHCCEEEECCCCCCCCCCEEEEEECCCEEEEECCCEECHHHEEEEECC
EAGVLESAVIGVPHPDFGETVVGILVAEPGAEPDLDAIKQNISASLARFKHPQKLIVLPE
CCCCHHHHEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECC
LPRNTMGKVQKKALRAQFQDLFAPA
CCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ANPLYDTFFGRHQGKETPFLELVDGATINHKAYLELAAQYAHVLTHLGVQPGERIAVQI
CCCCHHHHHCCCCCCCCCCEEEECCCEECHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
AKSPQALAIYAACVQAGIVFLPLNTAYTADEVSYFVQNSGARVILCDGRRYDALTPIAQT
ECCCCHHHHHHHHHHCCEEEEECCCCCCHHHHHHHEECCCCEEEEECCCCCCCCCCHHHH
TGAVLETMNSDGSGSFASRAEGMPTTFETVARSEDDLAAFLYTSGTTGRSKGAMLTQGNL
HHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCEEECCCC
LSNSKVLTSEWAFTSKDVLLHALPIFHTHGLFVATNISLFAGCKMVFMPKFDLDVVLDRM
CCCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHCCEEEEECCCCHHHHHHCC
PTATVMMGVPTFYTRLLEDPRFTKNVAQNMRLFISGSAPLLAETHVQFEKRTGHRILERY
CCEEEEECCHHHHHHHHCCCCHHHHHHCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHHH
GMTETNMNTSNPYAGERRAGTVGFPLPGVELKITDSKTGATLPQGEIGQIEVRGPNVFKG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCEEEH
YWQMPEKTAEELRENGFFITGDLGQIDQDGYLHIVGRNKDLIISGGYNIYPKEIELLLDR
HHCCCHHHHHHHHHCCEEEECCCCCCCCCCEEEEEECCCEEEEECCCEECHHHEEEEECC
EAGVLESAVIGVPHPDFGETVVGILVAEPGAEPDLDAIKQNISASLARFKHPQKLIVLPE
CCCCHHHHEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECC
LPRNTMGKVQKKALRAQFQDLFAPA
CCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]