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The map label for this gene is engB

Identifier: 110678769

GI number: 110678769

Start: 1380048

End: 1380698

Strand: Reverse

Name: engB

Synonym: RD1_1453

Alternate gene names: 110678769

Gene position: 1380698-1380048 (Counterclockwise)

Preceding gene: 110678770

Following gene: 110678768

Centisome position: 33.41

GC content: 59.29

Gene sequence:

>651_bases
ATGCAACTGCCCTTCCCGGTCGCGCAGGACCCTGATCAACACTCGCTCGAAAAGGGCCGCCTGCTCTTTGCGGGCGACAC
CGAATTCGTCAAGGGCGTGGTGGCCATGTCCGGCCTGCCGGATCCTGACCGCCTCGAAGTCTGCTTTGCCGGTCGCTCCA
ATGTTGGTAAATCCTCTTTGATCAACGCGCTGACGGGCCGCAAAGGTCTTGCGCGCGCCTCCAACACACCTGGACGCACG
CAGGAAATCAATTTCTTTACCGCGGGTGAGAGCCATTACCTCGTCGATCTGCCCGGCTATGGCTATGCAAACGCGCCGGT
GCCCGTGGTCGAAAAATGGCAACGGCTGCTGAAACAATACCTGTCCGGTCGCCAGACCCTGCGCCGCGCCTTCGTGTTGA
TTGATGCCCGTCACGGCGTCAAAAAGGTGGACGAAGAAATCCTCAGCCTGCTCGACAGTGCCGCCGTCACCTTTCAGGTC
GTTCTGACCAAGGCCGACAAGGTCAAGGAAAAGGAGCGCGAAAAGGTGCTGGATCAGGTGCGCACCGCCCTGTCAAAACA
CCCGGCCGCATTTCCGGAACTTGTTATCACCTCGAGTGAAAAGGGATGGGGTATCCCCACACTGCGCTCGATCATCACCG
ACCTGACCTGA

Upstream 100 bases:

>100_bases
TGGCCGCGCTGGACACCTGGGGCCATCAGGATTTTTCTGTCCGCGCCGAGGTCAAACACGGTGGCACCATTCGCGTCGGC
GATCAGATTGAGGTGCTGTG

Downstream 100 bases:

>100_bases
CACGCCCCAACCAAACCCATGGCCCCAAGATGAAGACCCAAGATATGAACCGCGACTGGATTTCAACCGCAAGCACGCTG
AACAAGGCGCTGCCCTATCT

Product: ribosome biogenesis GTP-binding protein YsxC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MQLPFPVAQDPDQHSLEKGRLLFAGDTEFVKGVVAMSGLPDPDRLEVCFAGRSNVGKSSLINALTGRKGLARASNTPGRT
QEINFFTAGESHYLVDLPGYGYANAPVPVVEKWQRLLKQYLSGRQTLRRAFVLIDARHGVKKVDEEILSLLDSAAVTFQV
VLTKADKVKEKEREKVLDQVRTALSKHPAAFPELVITSSEKGWGIPTLRSIITDLT

Sequences:

>Translated_216_residues
MQLPFPVAQDPDQHSLEKGRLLFAGDTEFVKGVVAMSGLPDPDRLEVCFAGRSNVGKSSLINALTGRKGLARASNTPGRT
QEINFFTAGESHYLVDLPGYGYANAPVPVVEKWQRLLKQYLSGRQTLRRAFVLIDARHGVKKVDEEILSLLDSAAVTFQV
VLTKADKVKEKEREKVLDQVRTALSKHPAAFPELVITSSEKGWGIPTLRSIITDLT
>Mature_216_residues
MQLPFPVAQDPDQHSLEKGRLLFAGDTEFVKGVVAMSGLPDPDRLEVCFAGRSNVGKSSLINALTGRKGLARASNTPGRT
QEINFFTAGESHYLVDLPGYGYANAPVPVVEKWQRLLKQYLSGRQTLRRAFVLIDARHGVKKVDEEILSLLDSAAVTFQV
VLTKADKVKEKEREKVLDQVRTALSKHPAAFPELVITSSEKGWGIPTLRSIITDLT

Specific function: Necessary for normal cell division and for the maintenance of normal septation

COG id: COG0218

COG function: function code R; Predicted GTPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain

Homologues:

Organism=Homo sapiens, GI56549685, Length=214, Percent_Identity=34.5794392523364, Blast_Score=118, Evalue=3e-27,
Organism=Homo sapiens, GI56549687, Length=140, Percent_Identity=32.8571428571429, Blast_Score=80, Evalue=2e-15,
Organism=Escherichia coli, GI145693205, Length=158, Percent_Identity=46.8354430379747, Blast_Score=143, Evalue=7e-36,
Organism=Saccharomyces cerevisiae, GI6320543, Length=195, Percent_Identity=33.3333333333333, Blast_Score=88, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ENGB_ROSDO (Q16AA3)

Other databases:

- EMBL:   CP000362
- RefSeq:   YP_681776.1
- ProteinModelPortal:   Q16AA3
- SMR:   Q16AA3
- STRING:   Q16AA3
- GeneID:   4197266
- GenomeReviews:   CP000362_GR
- KEGG:   rde:RD1_1453
- NMPDR:   fig|375451.6.peg.1362
- eggNOG:   COG0218
- HOGENOM:   HBG447097
- OMA:   RTQELIF
- PhylomeDB:   Q16AA3
- ProtClustDB:   PRK00454
- BioCyc:   RDEN375451:RD1_1453-MONOMER
- GO:   GO:0005622
- HAMAP:   MF_00321
- InterPro:   IPR019987
- InterPro:   IPR002917
- TIGRFAMs:   TIGR03598

Pfam domain/function: PF01926 MMR_HSR1

EC number: NA

Molecular weight: Translated: 23783; Mature: 23783

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLPFPVAQDPDQHSLEKGRLLFAGDTEFVKGVVAMSGLPDPDRLEVCFAGRSNVGKSSL
CCCCCCCCCCCCHHHHHHCCEEEECCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHH
INALTGRKGLARASNTPGRTQEINFFTAGESHYLVDLPGYGYANAPVPVVEKWQRLLKQY
HHHHHCCCCHHHCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH
LSGRQTLRRAFVLIDARHGVKKVDEEILSLLDSAAVTFQVVLTKADKVKEKEREKVLDQV
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTALSKHPAAFPELVITSSEKGWGIPTLRSIITDLT
HHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MQLPFPVAQDPDQHSLEKGRLLFAGDTEFVKGVVAMSGLPDPDRLEVCFAGRSNVGKSSL
CCCCCCCCCCCCHHHHHHCCEEEECCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHH
INALTGRKGLARASNTPGRTQEINFFTAGESHYLVDLPGYGYANAPVPVVEKWQRLLKQY
HHHHHCCCCHHHCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH
LSGRQTLRRAFVLIDARHGVKKVDEEILSLLDSAAVTFQVVLTKADKVKEKEREKVLDQV
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTALSKHPAAFPELVITSSEKGWGIPTLRSIITDLT
HHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA