| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is manX [C]
Identifier: 110678701
GI number: 110678701
Start: 1327198
End: 1327590
Strand: Direct
Name: manX [C]
Synonym: RD1_1382
Alternate gene names: 110678701
Gene position: 1327198-1327590 (Clockwise)
Preceding gene: 110678700
Following gene: 110678702
Centisome position: 32.11
GC content: 51.65
Gene sequence:
>393_bases TTGATCGGAATTGTAATCGTCGCACATGGAGGATTGGCCAGAGAATATCTGGCTGCCATTGAACATGTGGTCGGTGCACA AAGCGGGATTGAGGCGATTGCGATAGATGCAGATCATGACCGGGCCGAGAAAGAGCGTGAAATCTGCGTGGCCGCCGATG CCGTGGATCAGGGACATGGCGTGGTGCTGGTCACCGACCTCTTTGGTGGTTCCCCCTCAAATCTGAGTTTACAGGCCTGT GTTCCCGCAAACCGCCGAATTCTTTATGGGGCAAATCTGCCGATGCTGATCAAGCTTGCCAAAAGTCGGCATAAAACGAT ACCTGACGCCGTACGTGCCGCACTTGAAGCTGGTAAAAAATACATAGACAGTCAGAATATCAGCGCAGAATAA
Upstream 100 bases:
>100_bases GATGGCCCAATGCCATGCTTTGCGCCTTGCAGAAGAAGGCTGGCAGGTGTCAATTAGACACCGTGAGCTTGATTTGCGCA AAAATGAAGAGACCTGAGTT
Downstream 100 bases:
>100_bases CAAGGCCCCAAAGCCCATGACAAAACGCTCACTTGAAATCGTGAATATCAAAGGGCTGCACGCCCGTGCCTCTGCCAAAC TGGTCGAAGTGGTCGAGGGG
Product: PTS system IIA component, putative
Products: protein histidine; sugar phosphate
Alternate protein names: PTS System IIA Component; PTS System IIA Component Man Family; PTS System Fructose IIA Component; Pts System Fructose Subfamily IIa Component; Fructose-Specific IIA Component; PTS System Transporter Subunit IIA; PTS Mannose-Specific IIA Component; PTS System Mannose Subfamily IIA Subunit; IIA Component Of Sugar Transport PTS System; Pts System Mannose/Fructose/Sorbose Family IIa Component; PTS System Fructose Subfamily Transprotein Subunit IIA; Pts System Fructose IIA Component; PTS System Mannose/Fructose-Specific Component IIA; Phosphotransferase System Fructose Subfamily IIA Component; Mannose-Specific Phosphotransferase System Component IIA; PTS System Mannose-Type Transporter Subunit IIA; Pentitol Phosphotransferase IIA Component; PTS System Component IIA; Phosphotransferase System IIA Component; Protein-N P-Phosphohistidine-Sugar Phosphotransferase; PTS System Mannose/Fructose IIA Component; Phosphotransferase Mannose/Fructose-Specific Component IIA; PTS System Mannose/Fructose-Specific IIA Component; PTS System IIa Component; Phosphotransferase System Fructose-Specific IIA
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MIGIVIVAHGGLAREYLAAIEHVVGAQSGIEAIAIDADHDRAEKEREICVAADAVDQGHGVVLVTDLFGGSPSNLSLQAC VPANRRILYGANLPMLIKLAKSRHKTIPDAVRAALEAGKKYIDSQNISAE
Sequences:
>Translated_130_residues MIGIVIVAHGGLAREYLAAIEHVVGAQSGIEAIAIDADHDRAEKEREICVAADAVDQGHGVVLVTDLFGGSPSNLSLQAC VPANRRILYGANLPMLIKLAKSRHKTIPDAVRAALEAGKKYIDSQNISAE >Mature_130_residues MIGIVIVAHGGLAREYLAAIEHVVGAQSGIEAIAIDADHDRAEKEREICVAADAVDQGHGVVLVTDLFGGSPSNLSLQAC VPANRRILYGANLPMLIKLAKSRHKTIPDAVRAALEAGKKYIDSQNISAE
Specific function: This Is A Component Of The Phosphoenolpyruvate-Dependent Sugar Phosphotransferase System (Pts), A Major Carbohydrate Active -Transport System. The IIcd Domains Contain The Sugar Binding Site And The Transmembrane Channel; The IIa Domain Contains The Prim
COG id: COG2893
COG function: function code G; Phosphotransferase system, mannose/fructose-specific component IIA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 220 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 260 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.1.69
Molecular weight: Translated: 13721; Mature: 13721
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: PS51096 PTS_EIIA_TYPE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGIVIVAHGGLAREYLAAIEHVVGAQSGIEAIAIDADHDRAEKEREICVAADAVDQGHG CEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHCEEEEECCCCCCCC VVLVTDLFGGSPSNLSLQACVPANRRILYGANLPMLIKLAKSRHKTIPDAVRAALEAGKK EEEEEECCCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHH YIDSQNISAE HHCCCCCCCC >Mature Secondary Structure MIGIVIVAHGGLAREYLAAIEHVVGAQSGIEAIAIDADHDRAEKEREICVAADAVDQGHG CEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHCEEEEECCCCCCCC VVLVTDLFGGSPSNLSLQACVPANRRILYGANLPMLIKLAKSRHKTIPDAVRAALEAGKK EEEEEECCCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHH YIDSQNISAE HHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA