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The map label for this gene is 110678691

Identifier: 110678691

GI number: 110678691

Start: 1316579

End: 1317100

Strand: Reverse

Name: 110678691

Synonym: RD1_1371

Alternate gene names: NA

Gene position: 1317100-1316579 (Counterclockwise)

Preceding gene: 110678692

Following gene: 110678690

Centisome position: 31.87

GC content: 58.62

Gene sequence:

>522_bases
ATGAAACATCAGCGACTGAACAAACAATCATGGGTGGACAGGGGCCTTGCGGCACTGGTGCTCAAAGGTCCGACCGCGCT
GGCCGCGGAACCACTGGCACGTGATCTTGGCACGACGAAGGGCTCGTTTTACTGGCATTTCAAGGATGTACCGGACTTCC
AATCAGCGGTGGTGAAACACTGGCAGGGGCAGGCCTTTGCCAAGATGCTCGCGGCCCTCGAAGACGACGGCAGTGCCGAG
CAGCGGTTGCGGCGGTTCGGCAAGGAAATCCTCGCTGATTCGCATGATCCGGCCATGCGCGCATGGGCACGCTCCGACAA
ATCCGTCGCAAAGGCAATTTCTCAGGTGGATACAGAACGCCTGACCTATCTGAGCAACCTGCTGCGCCATCTGGGCATCA
AGAACGATGACTTTGCGCAAAGCCTGCTCGCCGCGCTCATCGGCCTGCCTGCCGTGACCAACAAAACAGCCGCCGCCAAA
TCCTTTGAGACGATGGTTGATCTGGTGCTGGCACTCAAGTGA

Upstream 100 bases:

>100_bases
ACGCACATCCAACAGGCAAGAACATGCTGCATCTGCACAACTCGCGCCTGCGACTTTCTTCGCACTTGCAGCATTTTCGC
TTCGGGCGTATGCCTGAGGC

Downstream 100 bases:

>100_bases
AGACATCAGCCGCCATCGCGGTCGCCCTTCTGGCCGTTAATGGCTGCACCAGAGATGAAACCGCAGCGGCCTATGGTGGT
GCGGATAAGGTCTGGCGCGT

Product: transcriptional regulatory protein

Products: NA

Alternate protein names: Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family; Transcriptional Regulatory Protein; TetR Family Regulatory Protein; Transcriptional Regulator Protein; TetR-Type Regulator

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MKHQRLNKQSWVDRGLAALVLKGPTALAAEPLARDLGTTKGSFYWHFKDVPDFQSAVVKHWQGQAFAKMLAALEDDGSAE
QRLRRFGKEILADSHDPAMRAWARSDKSVAKAISQVDTERLTYLSNLLRHLGIKNDDFAQSLLAALIGLPAVTNKTAAAK
SFETMVDLVLALK

Sequences:

>Translated_173_residues
MKHQRLNKQSWVDRGLAALVLKGPTALAAEPLARDLGTTKGSFYWHFKDVPDFQSAVVKHWQGQAFAKMLAALEDDGSAE
QRLRRFGKEILADSHDPAMRAWARSDKSVAKAISQVDTERLTYLSNLLRHLGIKNDDFAQSLLAALIGLPAVTNKTAAAK
SFETMVDLVLALK
>Mature_173_residues
MKHQRLNKQSWVDRGLAALVLKGPTALAAEPLARDLGTTKGSFYWHFKDVPDFQSAVVKHWQGQAFAKMLAALEDDGSAE
QRLRRFGKEILADSHDPAMRAWARSDKSVAKAISQVDTERLTYLSNLLRHLGIKNDDFAQSLLAALIGLPAVTNKTAAAK
SFETMVDLVLALK

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19099; Mature: 19099

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHQRLNKQSWVDRGLAALVLKGPTALAAEPLARDLGTTKGSFYWHFKDVPDFQSAVVKH
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHH
WQGQAFAKMLAALEDDGSAEQRLRRFGKEILADSHDPAMRAWARSDKSVAKAISQVDTER
HCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHH
LTYLSNLLRHLGIKNDDFAQSLLAALIGLPAVTNKTAAAKSFETMVDLVLALK
HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKHQRLNKQSWVDRGLAALVLKGPTALAAEPLARDLGTTKGSFYWHFKDVPDFQSAVVKH
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHH
WQGQAFAKMLAALEDDGSAEQRLRRFGKEILADSHDPAMRAWARSDKSVAKAISQVDTER
HCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHH
LTYLSNLLRHLGIKNDDFAQSLLAALIGLPAVTNKTAAAKSFETMVDLVLALK
HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA