| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
Click here to switch to the map view.
The map label for this gene is rdxS
Identifier: 110678602
GI number: 110678602
Start: 1240302
End: 1240463
Strand: Direct
Name: rdxS
Synonym: RD1_1277
Alternate gene names: NA
Gene position: 1240302-1240463 (Clockwise)
Preceding gene: 110678601
Following gene: 110678604
Centisome position: 30.01
GC content: 53.09
Gene sequence:
>162_bases ATGAACGTCCTGGCATATCTGATCCCCATTTCCCTGATACTCGGAGGCCTTGGGCTGGCCGGGTTCTTATATACGTTGCG CAGCCGTCAATACGAAGACCCCGAAGGTGACAGCCGCCGCATTCTAAGTGATGAATGGGACGATAAGCCGAAAAGCGATT AG
Upstream 100 bases:
>100_bases TTGCTGTCGCCGGTCTGGCCACGCCGCTGATCGCGGCCTTGGCGATGTCGACGTCGTCGCTAACGGTATCGGTCAATGCT CTGCGGATCAGGGGGCGCGG
Downstream 100 bases:
>100_bases AGCGTCTGACGGAATACCTGAAACATCACGTATCATGTAGCGCGTTGAAATTCTTGATTTCAGGCAGCGTTATGTGATTC AGTTTTTCCGTATGACGCTT
Product: RdxS protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 53; Mature: 53
Protein sequence:
>53_residues MNVLAYLIPISLILGGLGLAGFLYTLRSRQYEDPEGDSRRILSDEWDDKPKSD
Sequences:
>Translated_53_residues MNVLAYLIPISLILGGLGLAGFLYTLRSRQYEDPEGDSRRILSDEWDDKPKSD >Mature_53_residues MNVLAYLIPISLILGGLGLAGFLYTLRSRQYEDPEGDSRRILSDEWDDKPKSD
Specific function: Unknown
COG id: COG3197
COG function: function code P; Uncharacterized protein, possibly involved in nitrogen fixation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5999; Mature: 5999
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVLAYLIPISLILGGLGLAGFLYTLRSRQYEDPEGDSRRILSDEWDDKPKSD CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNVLAYLIPISLILGGLGLAGFLYTLRSRQYEDPEGDSRRILSDEWDDKPKSD CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA