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The map label for this gene is ccoN [H]

Identifier: 110678595

GI number: 110678595

Start: 1232700

End: 1234313

Strand: Direct

Name: ccoN [H]

Synonym: RD1_1270

Alternate gene names: 110678595

Gene position: 1232700-1234313 (Clockwise)

Preceding gene: 110678593

Following gene: 110678596

Centisome position: 29.83

GC content: 57.5

Gene sequence:

>1614_bases
ATGAATACCGGAACACTGAATTACCTAAAGTTGGTGGCGCTGGGGCTCGTTACACTGTTTGCGATGATCGCAGCCAGCTA
TGCGCGCGATCTGGCCTACCAGCTTCATATGATTATCTTTATGCTTGTGGCAGGCGGCCTGTTTCTGGTCACGCTGCGCA
GGACGGATGAACCTGTCACGCCCATCGCCAAAGATGAGTATTTCGACAGCGTTGTCCGTGCAGGCGTGATTGCAACGGCC
TTTTGGGGTGTTGTGGGCTTCTTGGTGGGCGTCGTGATTGCCTTCCAACTGGCCTTTCCAAGCCTCAATTTCGAATGGGC
CGAGGGATATGCCAACTTCGGACGGCTGCGGCCCTTGCACACCTCTGCGGTGATTTTCGCCTTTGGGGGTAACGCATTGA
TCGCCAGTTCGTTCTTCATCGTGCAGCGGACGTCGGCGGCGCGGCTTTGGGGCGGTAATCTGGGGTGGTTCGTCTTTTGG
GGCTATCAGTTGTTCATCGTTCTTGCCGCGACCGGGTATCTGCTGGGCGGCACACAATCCAAGGAATATGCGGAACCAGA
ATGGTATGTTGATATCTGGCTGACAGTCGTCTGGCTTGCCTTCCTGGCCTGTTTCCTCGGCACGATCATCCGCCGCAAAG
AGCCACATATCTACGTGGCAAACTGGTTCCTGCTGGCCTTTATCGTGACCGTTGCGATGCTGCATGTGGTCAACAACATC
TCGATCCCCGTGTCGATCTGGGGCTCCAAGTCCGTGCAGGTCTTTTCGGGCGTTCAGGATGCGATGGTGCAGTGGTGGTA
CGGCCACAACGCGGTTGGCTTCTTTCTGACCGCCGGGTTCCTCGGCATGATGTACTACTTCGTGCCCAAACAGGCTGAAC
GGCCTGTGTTCAGCTACAAGCTGTCGATCATCCACTTCTGGGCGCTGATCTTCCTGTATATCTGGGCGGGTCCACACCAC
TTGCATTATACCGCTTTGCCTGATTGGGCGGCGACACTGGGCATGGTCTTTTCGATCATCCTGTGGATGCCAAGCTGGGG
TGGCATGATCAATGGTCTGATGACGCTGCAAGGCGCCTGGGACAAGCTGCGCACCGATCCGGTTCTGCGGATGATGGTGA
CGTCGCTGGCCTTTTACGGCATGTCCACCTTCGAGGGTCCGATGATGTCGATCCGCGCGGTGAACTCGCTGTCGCATTAC
ACCGACTGGACCATTGGGCACGTGCACTCCGGTGCGCTTGGCTGGAACGGGCTGATCACTTTCGGCGCGCTTTACTACCT
CGTGCCGGTGCTGTGGAAGCGCGAGCGTCTTTATTCGCTGTCACTGGTCAGCTGGCACTTCTGGCTCGCCACCATCGGCA
TTGTGCTCTACGCGGCGTCCATGTGGGTGACCGGAATCATGGAAGGCCTGATGTGGCGTGAAGTGGATGCCAACGGCTTC
CTCGTGAACTCTTTCGCCGACACCGTCAGCGCCAAGTTCCCGATGTATGTGGTCCGTGGTCTGGGTGGGGTTCTGTTCCT
CGGCGGCGCACTGATCATGTGTTACAACCTTTGGATGACTGTGAAGGCTGCGCCCGCCAAGGCGCCGCTCGGCACAGCTG
TCCCTGCTGAATAA

Upstream 100 bases:

>100_bases
TATTCAAACCGCCGACGGGCAAGAACACTCCTCATGACTGATGAGATTTGTGCGGGCGGACTCCGTCTGCACATAGCCGA
GACGGAAGGGATACCGGAGT

Downstream 100 bases:

>100_bases
GGAGGGATCAATACATGTCGATCCTCGCAAAACACAAGTTCATTGAAACCAATGCAACACTGTTGCTGGTGCTGAGCTTC
CTTGTGGTTACAATCGGGGG

Product: cbb3-type cytochrome c oxidase subunit I

Products: NA

Alternate protein names: Cytochrome BB(3) subunit 1; Cytochrome c oxidase polypeptide I [H]

Number of amino acids: Translated: 537; Mature: 537

Protein sequence:

>537_residues
MNTGTLNYLKLVALGLVTLFAMIAASYARDLAYQLHMIIFMLVAGGLFLVTLRRTDEPVTPIAKDEYFDSVVRAGVIATA
FWGVVGFLVGVVIAFQLAFPSLNFEWAEGYANFGRLRPLHTSAVIFAFGGNALIASSFFIVQRTSAARLWGGNLGWFVFW
GYQLFIVLAATGYLLGGTQSKEYAEPEWYVDIWLTVVWLAFLACFLGTIIRRKEPHIYVANWFLLAFIVTVAMLHVVNNI
SIPVSIWGSKSVQVFSGVQDAMVQWWYGHNAVGFFLTAGFLGMMYYFVPKQAERPVFSYKLSIIHFWALIFLYIWAGPHH
LHYTALPDWAATLGMVFSIILWMPSWGGMINGLMTLQGAWDKLRTDPVLRMMVTSLAFYGMSTFEGPMMSIRAVNSLSHY
TDWTIGHVHSGALGWNGLITFGALYYLVPVLWKRERLYSLSLVSWHFWLATIGIVLYAASMWVTGIMEGLMWREVDANGF
LVNSFADTVSAKFPMYVVRGLGGVLFLGGALIMCYNLWMTVKAAPAKAPLGTAVPAE

Sequences:

>Translated_537_residues
MNTGTLNYLKLVALGLVTLFAMIAASYARDLAYQLHMIIFMLVAGGLFLVTLRRTDEPVTPIAKDEYFDSVVRAGVIATA
FWGVVGFLVGVVIAFQLAFPSLNFEWAEGYANFGRLRPLHTSAVIFAFGGNALIASSFFIVQRTSAARLWGGNLGWFVFW
GYQLFIVLAATGYLLGGTQSKEYAEPEWYVDIWLTVVWLAFLACFLGTIIRRKEPHIYVANWFLLAFIVTVAMLHVVNNI
SIPVSIWGSKSVQVFSGVQDAMVQWWYGHNAVGFFLTAGFLGMMYYFVPKQAERPVFSYKLSIIHFWALIFLYIWAGPHH
LHYTALPDWAATLGMVFSIILWMPSWGGMINGLMTLQGAWDKLRTDPVLRMMVTSLAFYGMSTFEGPMMSIRAVNSLSHY
TDWTIGHVHSGALGWNGLITFGALYYLVPVLWKRERLYSLSLVSWHFWLATIGIVLYAASMWVTGIMEGLMWREVDANGF
LVNSFADTVSAKFPMYVVRGLGGVLFLGGALIMCYNLWMTVKAAPAKAPLGTAVPAE
>Mature_537_residues
MNTGTLNYLKLVALGLVTLFAMIAASYARDLAYQLHMIIFMLVAGGLFLVTLRRTDEPVTPIAKDEYFDSVVRAGVIATA
FWGVVGFLVGVVIAFQLAFPSLNFEWAEGYANFGRLRPLHTSAVIFAFGGNALIASSFFIVQRTSAARLWGGNLGWFVFW
GYQLFIVLAATGYLLGGTQSKEYAEPEWYVDIWLTVVWLAFLACFLGTIIRRKEPHIYVANWFLLAFIVTVAMLHVVNNI
SIPVSIWGSKSVQVFSGVQDAMVQWWYGHNAVGFFLTAGFLGMMYYFVPKQAERPVFSYKLSIIHFWALIFLYIWAGPHH
LHYTALPDWAATLGMVFSIILWMPSWGGMINGLMTLQGAWDKLRTDPVLRMMVTSLAFYGMSTFEGPMMSIRAVNSLSHY
TDWTIGHVHSGALGWNGLITFGALYYLVPVLWKRERLYSLSLVSWHFWLATIGIVLYAASMWVTGIMEGLMWREVDANGF
LVNSFADTVSAKFPMYVVRGLGGVLFLGGALIMCYNLWMTVKAAPAKAPLGTAVPAE

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Co I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG3278

COG function: function code O; Cbb3-type cytochrome oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004677
- InterPro:   IPR000883 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 60018; Mature: 60018

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: PS50855 COX1 ; PS00077 COX1_CUB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTGTLNYLKLVALGLVTLFAMIAASYARDLAYQLHMIIFMLVAGGLFLVTLRRTDEPVT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
PIAKDEYFDSVVRAGVIATAFWGVVGFLVGVVIAFQLAFPSLNFEWAEGYANFGRLRPLH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEC
TSAVIFAFGGNALIASSFFIVQRTSAARLWGGNLGWFVFWGYQLFIVLAATGYLLGGTQS
CCEEEEEECCCCHHHHHEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
KEYAEPEWYVDIWLTVVWLAFLACFLGTIIRRKEPHIYVANWFLLAFIVTVAMLHVVNNI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCC
SIPVSIWGSKSVQVFSGVQDAMVQWWYGHNAVGFFLTAGFLGMMYYFVPKQAERPVFSYK
CEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
LSIIHFWALIFLYIWAGPHHLHYTALPDWAATLGMVFSIILWMPSWGGMINGLMTLQGAW
HHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCH
DKLRTDPVLRMMVTSLAFYGMSTFEGPMMSIRAVNSLSHYTDWTIGHVHSGALGWNGLIT
HHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHH
FGALYYLVPVLWKRERLYSLSLVSWHFWLATIGIVLYAASMWVTGIMEGLMWREVDANGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCE
LVNSFADTVSAKFPMYVVRGLGGVLFLGGALIMCYNLWMTVKAAPAKAPLGTAVPAE
EEECHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MNTGTLNYLKLVALGLVTLFAMIAASYARDLAYQLHMIIFMLVAGGLFLVTLRRTDEPVT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
PIAKDEYFDSVVRAGVIATAFWGVVGFLVGVVIAFQLAFPSLNFEWAEGYANFGRLRPLH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEC
TSAVIFAFGGNALIASSFFIVQRTSAARLWGGNLGWFVFWGYQLFIVLAATGYLLGGTQS
CCEEEEEECCCCHHHHHEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
KEYAEPEWYVDIWLTVVWLAFLACFLGTIIRRKEPHIYVANWFLLAFIVTVAMLHVVNNI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCC
SIPVSIWGSKSVQVFSGVQDAMVQWWYGHNAVGFFLTAGFLGMMYYFVPKQAERPVFSYK
CEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
LSIIHFWALIFLYIWAGPHHLHYTALPDWAATLGMVFSIILWMPSWGGMINGLMTLQGAW
HHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCH
DKLRTDPVLRMMVTSLAFYGMSTFEGPMMSIRAVNSLSHYTDWTIGHVHSGALGWNGLIT
HHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHH
FGALYYLVPVLWKRERLYSLSLVSWHFWLATIGIVLYAASMWVTGIMEGLMWREVDANGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCE
LVNSFADTVSAKFPMYVVRGLGGVLFLGGALIMCYNLWMTVKAAPAKAPLGTAVPAE
EEECHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7891558 [H]