Click here to switch to the map view.

The map label for this gene is 110678578

Identifier: 110678578

GI number: 110678578

Start: 1213116

End: 1213604

Strand: Reverse

Name: 110678578

Synonym: RD1_1252

Alternate gene names: NA

Gene position: 1213604-1213116 (Counterclockwise)

Preceding gene: 110678579

Following gene: 110678577

Centisome position: 29.36

GC content: 66.05

Gene sequence:

>489_bases
ATGAGCAAACGCGACCCCTTCCGCCCGGTTGATGCCGAGGCCCGCGCGCTGGCGCGCGATCTGATCGACCATGCCACTTA
CGCAGCCCTCGCCGTGATCGAACAGGGACACCCCAGCGTGAGCCGCATCGCCTTTGCCACCGACCCGGGTGGCGCGCCGT
TGTCGCTGATTTCGGACCTGTCCTCGCACACCACGGCGCTGGAGGCACAACCCGACTGCGCGCTGCTTGTGGGCGAACCA
TCAGACCGGGGCGATCCGCTGACCCATCCGCGCCTGACCCTGCAGGCCACCGCCTGTTTCATCCCCCGCGACAGCGCCGA
ACACCCGGCCCTGCGCGCGCATTACCTTAAACAGCGCCCCAAGGCGAAACTCTACATTGATTTCGGTGATTTCCGGCTGG
TTCGCTTTGACGTCCGCCTCGCCTTGCTGAATGGCGGTTTCGGGCGTGCCTACAAGCTGACGGCGGCTGACCTGACCATG
GCGCCCTAG

Upstream 100 bases:

>100_bases
ATACGCGGGTCTGGCCTGTGCGTTGCTCGCCATGGTGCTGATGAGCCGCATCGCCTGAATACCCGGTTGCAACCGGCGCG
CCGCGCCCCACATCTGATGC

Downstream 100 bases:

>100_bases
GCCGGATCATCCCCGTCCGTTCCGCGCTTTACGACCTTGTCCTCTCTGCGCAATTGGATAAGCTGCCACGCATCAATTCA
ACCTAAAGAGGTGCGCCATG

Product: hypothetical protein

Products: NA

Alternate protein names: Pyridoxamine Oxidase Protein; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Heme Iron Utilization Protein

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MSKRDPFRPVDAEARALARDLIDHATYAALAVIEQGHPSVSRIAFATDPGGAPLSLISDLSSHTTALEAQPDCALLVGEP
SDRGDPLTHPRLTLQATACFIPRDSAEHPALRAHYLKQRPKAKLYIDFGDFRLVRFDVRLALLNGGFGRAYKLTAADLTM
AP

Sequences:

>Translated_162_residues
MSKRDPFRPVDAEARALARDLIDHATYAALAVIEQGHPSVSRIAFATDPGGAPLSLISDLSSHTTALEAQPDCALLVGEP
SDRGDPLTHPRLTLQATACFIPRDSAEHPALRAHYLKQRPKAKLYIDFGDFRLVRFDVRLALLNGGFGRAYKLTAADLTM
AP
>Mature_161_residues
SKRDPFRPVDAEARALARDLIDHATYAALAVIEQGHPSVSRIAFATDPGGAPLSLISDLSSHTTALEAQPDCALLVGEPS
DRGDPLTHPRLTLQATACFIPRDSAEHPALRAHYLKQRPKAKLYIDFGDFRLVRFDVRLALLNGGFGRAYKLTAADLTMA
P

Specific function: Unknown

COG id: COG0748

COG function: function code P; Putative heme iron utilization protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17600; Mature: 17469

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRDPFRPVDAEARALARDLIDHATYAALAVIEQGHPSVSRIAFATDPGGAPLSLISDL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHH
SSHTTALEAQPDCALLVGEPSDRGDPLTHPRLTLQATACFIPRDSAEHPALRAHYLKQRP
HHCCEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHCCC
KAKLYIDFGDFRLVRFDVRLALLNGGFGRAYKLTAADLTMAP
CEEEEEEECCEEEEEEEEEEEEEECCCCCEEEEEECCEEECC
>Mature Secondary Structure 
SKRDPFRPVDAEARALARDLIDHATYAALAVIEQGHPSVSRIAFATDPGGAPLSLISDL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHH
SSHTTALEAQPDCALLVGEPSDRGDPLTHPRLTLQATACFIPRDSAEHPALRAHYLKQRP
HHCCEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHCCC
KAKLYIDFGDFRLVRFDVRLALLNGGFGRAYKLTAADLTMAP
CEEEEEEECCEEEEEEEEEEEEEECCCCCEEEEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA