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The map label for this gene is 110678574

Identifier: 110678574

GI number: 110678574

Start: 1210745

End: 1211452

Strand: Reverse

Name: 110678574

Synonym: RD1_1248

Alternate gene names: NA

Gene position: 1211452-1210745 (Counterclockwise)

Preceding gene: 110678576

Following gene: 110678571

Centisome position: 29.31

GC content: 57.77

Gene sequence:

>708_bases
ATGCGGTCCGTGGTTTTCGCGCTGATATTGGCCTTGGCAAGCGCGCCTTCCGCGCAGGCTGGGGCGTGGTTGCGCGAAAA
AGGCAAAGGTTTCGTGTCAACCTCCGTGCAGACAACCGAAAACAACGGCAGCTCCGTCAGCTTTTACATGGAATACGGGT
TGGGTGAAAAAGTCACCATCGGCGCCGATATCACCTATGACACTGAAATTCTGAACTATGTCGCGGGTGCCGATATCGCC
GCTACGACGATCGAAGACGTGCCGATCGGGTCCGGCATCCTGTTTGCGCGCTTTCCCTTGGGCCCCGTGGACCAGCCCAA
TAAATGGGCCTTTCACCTCGGTATCGGCGCGCGGTACTTCGAGGCGGAGTTTCTCAAGGCCGCCGAACTGGGCCTGTCCT
GGGGCCGTGGTATTCAGATCGGCGATAAATACGGCTGGGTCAATGTGGACAGCAGCTATAACGACGCCGAAGCACCCGCC
AAAGCGCGCATCAAAGTGGATGGCACGGTCGGTCTGGGGCTCACCGACACAACCAAGGTCATGATGCAGATGTTCAACAC
GTTCGAGGATGGACAAAGTTTTTCAAAACTCTCCCCCTCGCTGCTGTTTTCGCCGGGCAGGGGCCGGGTGACGTTTCAAT
TCAGCAGCGAGATACCGGTCGAAAGCGGTGAGGCGTCGCTGAAACTCGGGGTCTGGACGGAATTCTGA

Upstream 100 bases:

>100_bases
TGTTCCGGTTTTCACCCGCGCAGAACCGCAAAAATCTCTAAAAATGCGTAACCAATTTTTAACGCTCGTTAACCATGATG
CAGACCGGGAGACGAATGTG

Downstream 100 bases:

>100_bases
TGCCGGTCAGGTTATGAAATCGGCCGCATCCAGAATCTGCACCCCATTGATACGCCAGCCATTTTCAGTTTCGAGCATGC
GGTAATCAAGGATATGCACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MRSVVFALILALASAPSAQAGAWLREKGKGFVSTSVQTTENNGSSVSFYMEYGLGEKVTIGADITYDTEILNYVAGADIA
ATTIEDVPIGSGILFARFPLGPVDQPNKWAFHLGIGARYFEAEFLKAAELGLSWGRGIQIGDKYGWVNVDSSYNDAEAPA
KARIKVDGTVGLGLTDTTKVMMQMFNTFEDGQSFSKLSPSLLFSPGRGRVTFQFSSEIPVESGEASLKLGVWTEF

Sequences:

>Translated_235_residues
MRSVVFALILALASAPSAQAGAWLREKGKGFVSTSVQTTENNGSSVSFYMEYGLGEKVTIGADITYDTEILNYVAGADIA
ATTIEDVPIGSGILFARFPLGPVDQPNKWAFHLGIGARYFEAEFLKAAELGLSWGRGIQIGDKYGWVNVDSSYNDAEAPA
KARIKVDGTVGLGLTDTTKVMMQMFNTFEDGQSFSKLSPSLLFSPGRGRVTFQFSSEIPVESGEASLKLGVWTEF
>Mature_235_residues
MRSVVFALILALASAPSAQAGAWLREKGKGFVSTSVQTTENNGSSVSFYMEYGLGEKVTIGADITYDTEILNYVAGADIA
ATTIEDVPIGSGILFARFPLGPVDQPNKWAFHLGIGARYFEAEFLKAAELGLSWGRGIQIGDKYGWVNVDSSYNDAEAPA
KARIKVDGTVGLGLTDTTKVMMQMFNTFEDGQSFSKLSPSLLFSPGRGRVTFQFSSEIPVESGEASLKLGVWTEF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25294; Mature: 25294

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSVVFALILALASAPSAQAGAWLREKGKGFVSTSVQTTENNGSSVSFYMEYGLGEKVTI
CHHHHHHHHHHHHCCCCCHHCHHHHHCCCEEEEEEEEEECCCCCEEEEEEECCCCCEEEE
GADITYDTEILNYVAGADIAATTIEDVPIGSGILFARFPLGPVDQPNKWAFHLGIGARYF
CCCCEEHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCHHH
EAEFLKAAELGLSWGRGIQIGDKYGWVNVDSSYNDAEAPAKARIKVDGTVGLGLTDTTKV
HHHHHHHHHHCCCCCCCEEECCCCCEEEECCCCCCCCCCCEEEEEECCEEECCCCHHHHH
MMQMFNTFEDGQSFSKLSPSLLFSPGRGRVTFQFSSEIPVESGEASLKLGVWTEF
HHHHHHHHHCCCHHHHCCCCEEECCCCCEEEEEECCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MRSVVFALILALASAPSAQAGAWLREKGKGFVSTSVQTTENNGSSVSFYMEYGLGEKVTI
CHHHHHHHHHHHHCCCCCHHCHHHHHCCCEEEEEEEEEECCCCCEEEEEEECCCCCEEEE
GADITYDTEILNYVAGADIAATTIEDVPIGSGILFARFPLGPVDQPNKWAFHLGIGARYF
CCCCEEHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCHHH
EAEFLKAAELGLSWGRGIQIGDKYGWVNVDSSYNDAEAPAKARIKVDGTVGLGLTDTTKV
HHHHHHHHHHCCCCCCCEEECCCCCEEEECCCCCCCCCCCEEEEEECCEEECCCCHHHHH
MMQMFNTFEDGQSFSKLSPSLLFSPGRGRVTFQFSSEIPVESGEASLKLGVWTEF
HHHHHHHHHCCCHHHHCCCCEEECCCCCEEEEEECCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA