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The map label for this gene is yeeO [C]

Identifier: 110678548

GI number: 110678548

Start: 1185667

End: 1187016

Strand: Direct

Name: yeeO [C]

Synonym: RD1_1220

Alternate gene names: 110678548

Gene position: 1185667-1187016 (Clockwise)

Preceding gene: 110678547

Following gene: 110678550

Centisome position: 28.69

GC content: 60.89

Gene sequence:

>1350_bases
ATGTCACTGACCTCATCCGTGGGGTTGATGGCGATTTTCGTGGTCGATTTCATCGACATGATTTTTATCGCGATGCTGGG
CAAGGCGGAACTGGCCGCCGCCGTGGGCTATGCGGCGACGGTGCTGTTTTTTACCACGTCTTTCGGGATCGGCATGGCGA
TTGCCGCCGGGGCGCTGGTGGCGCGCGCACTTGGTGCCGGTGATGCGCAACTCGCATCAGAGCGCAAGACCCATGCGCTG
ACCTATGGCGCGGTTTTTGGCGTCATTTTCGCAGCACTGGTCTGGATGAACCTCGCCCCGATTGTGGATTTGTTGGGGGC
AACGGGGCGCACGGCCGAGCTTGCGGTGCAGTATTTGCGGATTGTCGTGCCCAGCCTGCCGTTTCTGATGATCGGCATGA
TGGGGGGTGCGATTTTGCGCGCGCATGGGGATGCTCGCCGGGCGATGATGGCGACGATTTATGGCGGGTTGGTCAATGCC
GTGCTCGATCCCATTCTGATCTTTGGCCTCAATCTGGAACTTACCGGTGCCGCTCTGGCGTCAGTCGCTGCGCGCATAGT
CATTGCGGTCACGGCGATCATGCAGATTGTGCGGCATTACGGTGGTGTCGGGCGGCCCCATCCGCATGGTCTGCTGCGGG
ATTTGCCCCCGATTGCCGCGATTGCCTTCCCCGCCGTTCTGACGCAGCTTGCCACCCCGGTCGGACAGGCCATCGTGACC
CGCGCCATGGCCGAGTTTGGCGAAGCCGCCGTTGCCGGAATGGCGATTGTCGGACGGCTCAGTCCGCTGGCCTTTGGCTT
GATCTTTGCCCTGTCCGGGGCTGTCGGGCCGATCCTCGGGCAGAACTACGGCGCGCGCAATTTCGAGCGTGTGCAAGCAG
GTCTGACATCTGCCTTGCTCTTTACGGCACTTGTCAGCGTTGTCGTTTCATGCGTGCTTTTCGCCTTGCGCAACCCGATT
GCCGATCTCTTTCTGGCGCGCGGGATTACGCGGGACCTTGTCTTTTTGTTCTGTGGCCCGCTGTCGCTGTTGTTCTTTTT
CAACGGAGTGTTGTTCGTGGCCAATGCGACGTTCAACAACCTGGGCCATCCTTTTTTTTCGACCTTCCTCAACTGGGGGC
GCAACACTGTGGGCATGATCCCTCTTGTGCTGCTGGGGTCCAGCTTTTTCGGAGCGCAGGGGGTTCTGGTCGGGCAGGCC
GTGGCTGGTGTGATTTTTGGTCTGCTGGCTTGGTGGCTGGCGCGGCGCGTGATTGCCCGCGCGCCGCAGGAAATCGCCGC
GGCAGAGGCGAAACCCTCAGAATTTGGGCGGCAGGGTCGCCTCATGTCGCTCTTGTATCTGCGCCGATAA

Upstream 100 bases:

>100_bases
GCAGGTCGTCAAGGCCCGCCGATGAGCTGCGCGCGCCCGGTTCATGGCTGAGGCGCAGGCGAAATTCCTGACGGGGAACC
TGTTTCGCCATGTTTCAGTG

Downstream 100 bases:

>100_bases
ACGATCGAGGTTGTCATCGACCAGCGCGGTCTGTGCCCGCGTTAGCTTTTGGTGGCGCGGATAGATAGGATCGGCGCGGT
CGTTGAGGATGGGCGTGTGC

Product: MATE efflux pump protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 448

Protein sequence:

>449_residues
MSLTSSVGLMAIFVVDFIDMIFIAMLGKAELAAAVGYAATVLFFTTSFGIGMAIAAGALVARALGAGDAQLASERKTHAL
TYGAVFGVIFAALVWMNLAPIVDLLGATGRTAELAVQYLRIVVPSLPFLMIGMMGGAILRAHGDARRAMMATIYGGLVNA
VLDPILIFGLNLELTGAALASVAARIVIAVTAIMQIVRHYGGVGRPHPHGLLRDLPPIAAIAFPAVLTQLATPVGQAIVT
RAMAEFGEAAVAGMAIVGRLSPLAFGLIFALSGAVGPILGQNYGARNFERVQAGLTSALLFTALVSVVVSCVLFALRNPI
ADLFLARGITRDLVFLFCGPLSLLFFFNGVLFVANATFNNLGHPFFSTFLNWGRNTVGMIPLVLLGSSFFGAQGVLVGQA
VAGVIFGLLAWWLARRVIARAPQEIAAAEAKPSEFGRQGRLMSLLYLRR

Sequences:

>Translated_449_residues
MSLTSSVGLMAIFVVDFIDMIFIAMLGKAELAAAVGYAATVLFFTTSFGIGMAIAAGALVARALGAGDAQLASERKTHAL
TYGAVFGVIFAALVWMNLAPIVDLLGATGRTAELAVQYLRIVVPSLPFLMIGMMGGAILRAHGDARRAMMATIYGGLVNA
VLDPILIFGLNLELTGAALASVAARIVIAVTAIMQIVRHYGGVGRPHPHGLLRDLPPIAAIAFPAVLTQLATPVGQAIVT
RAMAEFGEAAVAGMAIVGRLSPLAFGLIFALSGAVGPILGQNYGARNFERVQAGLTSALLFTALVSVVVSCVLFALRNPI
ADLFLARGITRDLVFLFCGPLSLLFFFNGVLFVANATFNNLGHPFFSTFLNWGRNTVGMIPLVLLGSSFFGAQGVLVGQA
VAGVIFGLLAWWLARRVIARAPQEIAAAEAKPSEFGRQGRLMSLLYLRR
>Mature_448_residues
SLTSSVGLMAIFVVDFIDMIFIAMLGKAELAAAVGYAATVLFFTTSFGIGMAIAAGALVARALGAGDAQLASERKTHALT
YGAVFGVIFAALVWMNLAPIVDLLGATGRTAELAVQYLRIVVPSLPFLMIGMMGGAILRAHGDARRAMMATIYGGLVNAV
LDPILIFGLNLELTGAALASVAARIVIAVTAIMQIVRHYGGVGRPHPHGLLRDLPPIAAIAFPAVLTQLATPVGQAIVTR
AMAEFGEAAVAGMAIVGRLSPLAFGLIFALSGAVGPILGQNYGARNFERVQAGLTSALLFTALVSVVVSCVLFALRNPIA
DLFLARGITRDLVFLFCGPLSLLFFFNGVLFVANATFNNLGHPFFSTFLNWGRNTVGMIPLVLLGSSFFGAQGVLVGQAV
AGVIFGLLAWWLARRVIARAPQEIAAAEAKPSEFGRQGRLMSLLYLRR

Specific function: Unknown

COG id: COG0534

COG function: function code V; Na+-driven multidrug efflux pump

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002528
- InterPro:   IPR015522 [H]

Pfam domain/function: PF01554 MatE [H]

EC number: NA

Molecular weight: Translated: 47134; Mature: 47003

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: PS00368 RIBORED_SMALL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHHHCCCHHHHCCCCHHHHHHHHCC
>Mature Secondary Structure 
SLTSSVGLMAIFVVDFIDMIFIAMLGKAELAAAVGYAATVLFFTTSFGIGMAIAAGALV
CCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARALGAGDAQLASERKTHALTYGAVFGVIFAALVWMNLAPIVDLLGATGRTAELAVQYLR
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IVVPSLPFLMIGMMGGAILRAHGDARRAMMATIYGGLVNAVLDPILIFGLNLELTGAALA
HHHCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHH
SVAARIVIAVTAIMQIVRHYGGVGRPHPHGLLRDLPPIAAIAFPAVLTQLATPVGQAIVT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
RAMAEFGEAAVAGMAIVGRLSPLAFGLIFALSGAVGPILGQNYGARNFERVQAGLTSALL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
FTALVSVVVSCVLFALRNPIADLFLARGITRDLVFLFCGPLSLLFFFNGVLFVANATFNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHEEECHHHH
LGHPFFSTFLNWGRNTVGMIPLVLLGSSFFGAQGVLVGQAVAGVIFGLLAWWLARRVIAR
CCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
APQEIAAAEAKPSEFGRQGRLMSLLYLRR
CCHHHHHHCCCHHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]