Click here to switch to the map view.

The map label for this gene is 110678511

Identifier: 110678511

GI number: 110678511

Start: 1144891

End: 1145610

Strand: Reverse

Name: 110678511

Synonym: RD1_1181

Alternate gene names: NA

Gene position: 1145610-1144891 (Counterclockwise)

Preceding gene: 110678512

Following gene: 110678508

Centisome position: 27.72

GC content: 59.03

Gene sequence:

>720_bases
ATGATCTTTGACTCCTTCTTTGCCGCACTGGCCCAGATGAGCGATGCGCGGTTTCGCAATGTGCTGCTGACCGGGATCGG
GCTGACCATTGCGCTGCTGATCGGGGCCTCGGCGCTTTTTGTCTGGCTGATGGGCGGGCTTGTCGGTGAAGAAGCGAACC
TGCCGCTGATCGGCGAAGTAACATGGCTGAACGATCTGGTCAGCTGGGGGGCTTTCGTCGCGGTCGCCGTATTGTCGATC
TTTTTGATGATCCCTGTGGCTTCGGCCATCACATCCATGTTTCTGGATACGGTCGCGCAAGCGGTGGAGGACAAACACTA
TCCAAACCTTGGCCCTGCGCAAAGCGTACCGCTGATGGATGGGCTGCGGGACACCTTCAGCTTTCTCGGCGTTCTGATCG
TGGCCAATATCTGCGCGCTGGTGCTTTACCTGTTCTTTGTCCCCTTGGCACCGTTCATCTTCTGGGGTTTGAACGGGTTC
CTGCTGGGACGGGAATACTTCACGCTGGCCGCCATGAGGCGCGTCGGGCGGCAACAGGCCAAAGTGCTGCGATCCCGCTA
TATGCTGCGGATCTGGGCGGCAGGGGTTTTGATGGCGATCCCGCTATCCGTGCCGCTGTTGAACCTGATCATCCCGATAC
TGGGAGCGGCAACCTTCACCCATCTGTTTCACCGGCTGTCGCCTCAGGGGCCATACGCCCAAACCAGTCCAGATCCCTGA

Upstream 100 bases:

>100_bases
ACGAACGCATTGCCGGGCTGATCCATATCGCAACCGAAACATCGACGCCTCCCGATCGCCCGCGCCCCGATCTGGACACC
ATTACATCCTGGATGCCGGA

Downstream 100 bases:

>100_bases
CGGTAATCATTTCCGACAAGATAATCGTTGAAATAATCACCCACAGGATAAGGCTGAGCACCGTGGTGATTTTCGCCTTT
TTCCCGACGTCATGCACTTC

Product: hypothetical protein

Products: NA

Alternate protein names: Carbamoyl-Phosphate Synthase Large Chain; CysZ Protein

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MIFDSFFAALAQMSDARFRNVLLTGIGLTIALLIGASALFVWLMGGLVGEEANLPLIGEVTWLNDLVSWGAFVAVAVLSI
FLMIPVASAITSMFLDTVAQAVEDKHYPNLGPAQSVPLMDGLRDTFSFLGVLIVANICALVLYLFFVPLAPFIFWGLNGF
LLGREYFTLAAMRRVGRQQAKVLRSRYMLRIWAAGVLMAIPLSVPLLNLIIPILGAATFTHLFHRLSPQGPYAQTSPDP

Sequences:

>Translated_239_residues
MIFDSFFAALAQMSDARFRNVLLTGIGLTIALLIGASALFVWLMGGLVGEEANLPLIGEVTWLNDLVSWGAFVAVAVLSI
FLMIPVASAITSMFLDTVAQAVEDKHYPNLGPAQSVPLMDGLRDTFSFLGVLIVANICALVLYLFFVPLAPFIFWGLNGF
LLGREYFTLAAMRRVGRQQAKVLRSRYMLRIWAAGVLMAIPLSVPLLNLIIPILGAATFTHLFHRLSPQGPYAQTSPDP
>Mature_239_residues
MIFDSFFAALAQMSDARFRNVLLTGIGLTIALLIGASALFVWLMGGLVGEEANLPLIGEVTWLNDLVSWGAFVAVAVLSI
FLMIPVASAITSMFLDTVAQAVEDKHYPNLGPAQSVPLMDGLRDTFSFLGVLIVANICALVLYLFFVPLAPFIFWGLNGF
LLGREYFTLAAMRRVGRQQAKVLRSRYMLRIWAAGVLMAIPLSVPLLNLIIPILGAATFTHLFHRLSPQGPYAQTSPDP

Specific function: Unknown

COG id: COG2981

COG function: function code E; Uncharacterized protein involved in cysteine biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26072; Mature: 26072

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFDSFFAALAQMSDARFRNVLLTGIGLTIALLIGASALFVWLMGGLVGEEANLPLIGEV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHH
TWLNDLVSWGAFVAVAVLSIFLMIPVASAITSMFLDTVAQAVEDKHYPNLGPAQSVPLMD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
GLRDTFSFLGVLIVANICALVLYLFFVPLAPFIFWGLNGFLLGREYFTLAAMRRVGRQQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVLRSRYMLRIWAAGVLMAIPLSVPLLNLIIPILGAATFTHLFHRLSPQGPYAQTSPDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MIFDSFFAALAQMSDARFRNVLLTGIGLTIALLIGASALFVWLMGGLVGEEANLPLIGEV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHH
TWLNDLVSWGAFVAVAVLSIFLMIPVASAITSMFLDTVAQAVEDKHYPNLGPAQSVPLMD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
GLRDTFSFLGVLIVANICALVLYLFFVPLAPFIFWGLNGFLLGREYFTLAAMRRVGRQQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVLRSRYMLRIWAAGVLMAIPLSVPLLNLIIPILGAATFTHLFHRLSPQGPYAQTSPDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA