| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110678487
Identifier: 110678487
GI number: 110678487
Start: 1118006
End: 1118209
Strand: Direct
Name: 110678487
Synonym: RD1_1157
Alternate gene names: NA
Gene position: 1118006-1118209 (Clockwise)
Preceding gene: 162139375
Following gene: 110678491
Centisome position: 27.05
GC content: 55.39
Gene sequence:
>204_bases ATGATCGAACTCCTCTTTATTGCGTGCCTTGCCACGGCACCGGATGAATGCCGTGAGCGCAGTCTCGTTTTCACCGATGT TACACCGATGCAGTGTTTGATGGGCGCGCAACCCGAGCTTGCCAAATGGGCAGCGTCCCATCCCAATCAGGACATCAAAA GCTGGCGCTGCCGTGCTGTCTCTTTTGCTGAACGCGAGACTTGA
Upstream 100 bases:
>100_bases GGCGCGCATGCTGTCTTAACGTCGAATTTACTGCGTTTGATATAGGGTTGCATCGTGAGCGGGAGGACAGAGCAAAGCAG ATTAAAGGAAGACCATAGCC
Downstream 100 bases:
>100_bases GCACATCGGCCTATCCTTTGCGCTTCATCATACCGCGCGAGGGATCATATCCCCAGGCCGCGATAAGCCCGAGAACCAGC GTGCTTGCCAGCACCCATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 67; Mature: 67
Protein sequence:
>67_residues MIELLFIACLATAPDECRERSLVFTDVTPMQCLMGAQPELAKWAASHPNQDIKSWRCRAVSFAERET
Sequences:
>Translated_67_residues MIELLFIACLATAPDECRERSLVFTDVTPMQCLMGAQPELAKWAASHPNQDIKSWRCRAVSFAERET >Mature_67_residues MIELLFIACLATAPDECRERSLVFTDVTPMQCLMGAQPELAKWAASHPNQDIKSWRCRAVSFAERET
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7585; Mature: 7585
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 10.4 %Cys+Met (Translated Protein) 6.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 10.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIELLFIACLATAPDECRERSLVFTDVTPMQCLMGAQPELAKWAASHPNQDIKSWRCRAV CHHHHHHHHHHCCCHHHHCCCEEEECCCHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHH SFAERET CCCCCCC >Mature Secondary Structure MIELLFIACLATAPDECRERSLVFTDVTPMQCLMGAQPELAKWAASHPNQDIKSWRCRAV CHHHHHHHHHHCCCHHHHCCCEEEECCCHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHH SFAERET CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA