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The map label for this gene is pqqA

Identifier: 110678484

GI number: 110678484

Start: 1115371

End: 1115478

Strand: Reverse

Name: pqqA

Synonym: RD1_1154

Alternate gene names: 110678484

Gene position: 1115478-1115371 (Counterclockwise)

Preceding gene: 110678485

Following gene: 110678483

Centisome position: 26.99

GC content: 51.85

Gene sequence:

>108_bases
ATGGCTTGGACGAAACCAATCATCCGCGAAATCGAGTGCGGCATGGAAATCAACATGTACGGACCAGAGAACGAAGATCG
TCACGACGACCGCGACGACCTGTTCTAA

Upstream 100 bases:

>100_bases
TGAACACCGATTAAAGTCGTATATGCTCTTATAAATTAAGAGTCGCGCAAACCGAGATCCTCTGTCAGAATGAAACGATA
AATCAGTGGAGGAGACCCCC

Downstream 100 bases:

>100_bases
ACATATCGCGCGCGGGCAGACACAGTGACTTTCCGCGCGCATATCCTTGGGGCCGCCGCCGGTGGCGGGTTGCCTCAATG
GAATTGCGGGTGTGACAATT

Product: coenzyme PQQ synthesis protein PqqA

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein A

Number of amino acids: Translated: 35; Mature: 34

Protein sequence:

>35_residues
MAWTKPIIREIECGMEINMYGPENEDRHDDRDDLF

Sequences:

>Translated_35_residues
MAWTKPIIREIECGMEINMYGPENEDRHDDRDDLF
>Mature_34_residues
AWTKPIIREIECGMEINMYGPENEDRHDDRDDLF

Specific function: Required for coenzyme pyrroloquinoline quinone (PQQ) biosynthesis. PQQ is probably formed by cross-linking a specific glutamate to a specific tyrosine residue and excising these residues from the peptide

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PqqA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PQQA_ROSDO (Q16B38)

Other databases:

- EMBL:   CP000362
- RefSeq:   YP_681491.1
- STRING:   Q16B38
- GeneID:   4197521
- GenomeReviews:   CP000362_GR
- KEGG:   rde:RD1_1154
- NMPDR:   fig|375451.6.peg.1074
- HOGENOM:   HBG466662
- ProtClustDB:   PRK00284
- BioCyc:   RDEN375451:RD1_1154-MONOMER
- HAMAP:   MF_00656
- InterPro:   IPR011725
- TIGRFAMs:   TIGR02107

Pfam domain/function: PF08042 PqqA

EC number: NA

Molecular weight: Translated: 4241; Mature: 4110

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
8.6 %Met     (Translated Protein)
11.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWTKPIIREIECGMEINMYGPENEDRHDDRDDLF
CCCCHHHHHHHCCCCEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AWTKPIIREIECGMEINMYGPENEDRHDDRDDLF
CCCHHHHHHHCCCCEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA