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The map label for this gene is 110678425

Identifier: 110678425

GI number: 110678425

Start: 1040063

End: 1040677

Strand: Reverse

Name: 110678425

Synonym: RD1_1088

Alternate gene names: NA

Gene position: 1040677-1040063 (Counterclockwise)

Preceding gene: 110678426

Following gene: 110678424

Centisome position: 25.18

GC content: 60.33

Gene sequence:

>615_bases
GTGCCCGTGCATCTTGCGGTCATCCCGGCATTGGCCGACGCGTCACTGGCGCAACATGTCAAAGGGTCGGATCACCTCGT
GCCGATCGTTCATGGCTGGCAGCACAAGAACCATGCCCCGAGCGGCCAGAAAAAAGCGGAATTCGGCGCAGCGCGCAGCG
GGGCCATCGCCGAACTCCATCGCGGGCTTGATCAGATGCGGCGGCTTTTTGGGACCGGGCTGGTGGCTGTCTTTGTGCCA
CCGTGGAACCGGATTGACCAATCCTACCTCGCGCCACTTGCCGATGCAGGCTATGCCGGCCTGTCGACCTTTACGCCACG
GCAAACCACCTATGCCGCCGATGGCCTGATGCAGATCAACACCCATATTGATCCCATCAACTGGCGCGGCACGCGCGGCC
TCACGGACCCCGCAACGCTCGTGGCACAAACGGTTGAAATGCTTGCCGCGCGCGCGGATGGGCAGACAGATGCGTTTGAA
CCCTTGGGTTACCTGACGCATCATCTTGTGCATACTGCGGATGTGTGGGACTTCACCCAGCAGTTTTTATCTGAACTTTT
GGATGGTGGCGCGCTGCCACAACCCATTGCCCCCTTGCTGGAGAAACACAGATGA

Upstream 100 bases:

>100_bases
GCCAATGGCATGGCCCTGCGCTTCTGGTGGCGCGATGATGATCGCTACGAAACCAACTGCGGCGCTGGATCAACTTGAAA
ATACCGCTGACGGGCTGGAC

Downstream 100 bases:

>100_bases
GCCGACTGGACTCCATGCGCCGCCGTCTAAGCGCACAGATCGACGGTCTGAACTGGGCCGCTGAGCAGGTGCAGGGCATT
GACGGCGATGTGCTGGAACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MPVHLAVIPALADASLAQHVKGSDHLVPIVHGWQHKNHAPSGQKKAEFGAARSGAIAELHRGLDQMRRLFGTGLVAVFVP
PWNRIDQSYLAPLADAGYAGLSTFTPRQTTYAADGLMQINTHIDPINWRGTRGLTDPATLVAQTVEMLAARADGQTDAFE
PLGYLTHHLVHTADVWDFTQQFLSELLDGGALPQPIAPLLEKHR

Sequences:

>Translated_204_residues
MPVHLAVIPALADASLAQHVKGSDHLVPIVHGWQHKNHAPSGQKKAEFGAARSGAIAELHRGLDQMRRLFGTGLVAVFVP
PWNRIDQSYLAPLADAGYAGLSTFTPRQTTYAADGLMQINTHIDPINWRGTRGLTDPATLVAQTVEMLAARADGQTDAFE
PLGYLTHHLVHTADVWDFTQQFLSELLDGGALPQPIAPLLEKHR
>Mature_203_residues
PVHLAVIPALADASLAQHVKGSDHLVPIVHGWQHKNHAPSGQKKAEFGAARSGAIAELHRGLDQMRRLFGTGLVAVFVPP
WNRIDQSYLAPLADAGYAGLSTFTPRQTTYAADGLMQINTHIDPINWRGTRGLTDPATLVAQTVEMLAARADGQTDAFEP
LGYLTHHLVHTADVWDFTQQFLSELLDGGALPQPIAPLLEKHR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22168; Mature: 22037

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVHLAVIPALADASLAQHVKGSDHLVPIVHGWQHKNHAPSGQKKAEFGAARSGAIAELH
CCEEEEHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCHHHHHH
RGLDQMRRLFGTGLVAVFVPPWNRIDQSYLAPLADAGYAGLSTFTPRQTTYAADGLMQIN
HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCEEEEC
THIDPINWRGTRGLTDPATLVAQTVEMLAARADGQTDAFEPLGYLTHHLVHTADVWDFTQ
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QFLSELLDGGALPQPIAPLLEKHR
HHHHHHHCCCCCCCHHHHHHHCCC
>Mature Secondary Structure 
PVHLAVIPALADASLAQHVKGSDHLVPIVHGWQHKNHAPSGQKKAEFGAARSGAIAELH
CEEEEHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCHHHHHH
RGLDQMRRLFGTGLVAVFVPPWNRIDQSYLAPLADAGYAGLSTFTPRQTTYAADGLMQIN
HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCEEEEC
THIDPINWRGTRGLTDPATLVAQTVEMLAARADGQTDAFEPLGYLTHHLVHTADVWDFTQ
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QFLSELLDGGALPQPIAPLLEKHR
HHHHHHHCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA