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The map label for this gene is 110678410

Identifier: 110678410

GI number: 110678410

Start: 1029242

End: 1030804

Strand: Reverse

Name: 110678410

Synonym: RD1_1072

Alternate gene names: NA

Gene position: 1030804-1029242 (Counterclockwise)

Preceding gene: 110678414

Following gene: 110678398

Centisome position: 24.94

GC content: 58.67

Gene sequence:

>1563_bases
ATGTCACGTATCCCGTATTCCGTTCAGAAATTCCAGTTTTCCATCGCCGAGGCCATCCCGCCGCTGGCGACACTGGTCAA
CAGGTTCGCCATAAACCGCGTTGTCAAACGCGCCAGAACACGACCGCATCCGCTGAGCACCGAACGCGATTATGTCAGCT
GGTCCGGCCTGACGGACAAACGCTGGAGCGCGCGACATCTGCCCCCACAAACCCGGGACAACCTGCCGGAGCCGGAGGTG
TTGCAAGAGCTGTTTCGGCGCAGAGAAGGCACGCAACGGCTGTGCCCAAAATCGACCTGTCTGTTTCCGGCCTTTGCGCA
ATATCTGACCGATGGGTTTATCCGCACGGAGTCCGAACATCTCACCCCTGAGGGGCAAGACCCCAAGCTGCACCTGAAAC
GCAACACGTCCAACCATGACATCGACATGTGCACGCTCTATGGCCGCACCCCCGCGCAGACGGATGCGCTGCGGCTGAAG
TCCAGCGATCCGGGCCTCAAAGGTCGTCTGAAATCCCAGATGATCGGGGATGAGGAATACCCGCCGTTTCTTTACCGCGA
CGGCGCGCCTGATCCCGATTTCGCGGTGCTGGACCCGCCACTTGGTGGCGCAGATCAAAGCCCTGAGAAACAGGCGAAGC
TCTTTGCGGTGGGCGGCGACCGGGTCAATTCCGTGCCACAGGTTGCCATGCTCAACACCCTGTTTCTGCGTGAACATAAC
CGGCTCGCAGGCGAGATCGAAGCCGCACACCCCGATTGGGATGATGACCGCGTTTTTGAAACGGCACGCAATACGGTCAT
CGTGATTTTCATCAAGATCATCGTTGAGGATTACATCAACCACATCTCTCCGCTGCCCTTCACGCTGCGCGCGGACCCGT
CGGTCGCATGGAATGCGCCATGGAACAAACCCAACTGGATCACCACGGAATTCAGCCTTTTGTACCGCTGGCATGCGCTG
ATCCCGGATAAGATCAGATGGGGCGATGATCTGCACCCGGTGCACACGACCTTCATGAACAACGATTTGCTGATCCGTCA
CGGCCTGCTGAAAGGGTTTGCCGGTATTTGCGCCACACAGGCCGCAGAACTGGGGCCGCGCAACACGGCGGAACCTTTGC
TGAAGGTTGAATTGGACTCCATCAAACAGGACCGTTTTTGCCAGCTGGCAGGGTTTTCGGACTATTGCAATTACATGAGC
CAGAACAGGCCAGTGTCGTTCCGGGCGATCTCCTCTGATCCGGAGGTCAGCGACGCGCTGGCCAGACACTATGACGGGCC
GCGCGACGTTGATCTGCACGTCGGCCTGTTTTGCGAGGATCGCGTGCCCAACAGCCCGTTACCAAACCTGATACTGGTCT
TCGTCGCGCTGGATGCCTTCAGTCAGGCGCTGACCAACCCGTTGCTGTCACAACATGTCTTCAAGCGCAGTACGTTTTCA
GCACCCGGGTGGAGCGCGATCCGACAGACGCAAACCCTGCGCGATGTGCTGGAGCGCAATGTGACGGGCGGTGTGGGCGA
TACATTTATCGCGATGACGCGCAAGGAATGGGTGCCAGAGTGA

Upstream 100 bases:

>100_bases
CCGACCGCGCCCGAGGCCCTGTCCGTAAATAAATCTAGAAAAAGGAACCGACATGCGAGATGCTCAACGCATAGTTGCGT
CATTTTAAAAGGACCATTTT

Downstream 100 bases:

>100_bases
AACCGCTCAGGTCGGTTCGGTGGGCGGGCCAAACCGTTCGATCAGACGCTCCCTGATCTGATCGCGGGCCTGCCGATACC
CGGCCAGCTTGCTTTCGCGC

Product: putative cyclooxygenase

Products: NA

Alternate protein names: Animal Heme Peroxidase; Cyclooxygenase; Prostaglandin-Endoperoxide Synthase

Number of amino acids: Translated: 520; Mature: 519

Protein sequence:

>520_residues
MSRIPYSVQKFQFSIAEAIPPLATLVNRFAINRVVKRARTRPHPLSTERDYVSWSGLTDKRWSARHLPPQTRDNLPEPEV
LQELFRRREGTQRLCPKSTCLFPAFAQYLTDGFIRTESEHLTPEGQDPKLHLKRNTSNHDIDMCTLYGRTPAQTDALRLK
SSDPGLKGRLKSQMIGDEEYPPFLYRDGAPDPDFAVLDPPLGGADQSPEKQAKLFAVGGDRVNSVPQVAMLNTLFLREHN
RLAGEIEAAHPDWDDDRVFETARNTVIVIFIKIIVEDYINHISPLPFTLRADPSVAWNAPWNKPNWITTEFSLLYRWHAL
IPDKIRWGDDLHPVHTTFMNNDLLIRHGLLKGFAGICATQAAELGPRNTAEPLLKVELDSIKQDRFCQLAGFSDYCNYMS
QNRPVSFRAISSDPEVSDALARHYDGPRDVDLHVGLFCEDRVPNSPLPNLILVFVALDAFSQALTNPLLSQHVFKRSTFS
APGWSAIRQTQTLRDVLERNVTGGVGDTFIAMTRKEWVPE

Sequences:

>Translated_520_residues
MSRIPYSVQKFQFSIAEAIPPLATLVNRFAINRVVKRARTRPHPLSTERDYVSWSGLTDKRWSARHLPPQTRDNLPEPEV
LQELFRRREGTQRLCPKSTCLFPAFAQYLTDGFIRTESEHLTPEGQDPKLHLKRNTSNHDIDMCTLYGRTPAQTDALRLK
SSDPGLKGRLKSQMIGDEEYPPFLYRDGAPDPDFAVLDPPLGGADQSPEKQAKLFAVGGDRVNSVPQVAMLNTLFLREHN
RLAGEIEAAHPDWDDDRVFETARNTVIVIFIKIIVEDYINHISPLPFTLRADPSVAWNAPWNKPNWITTEFSLLYRWHAL
IPDKIRWGDDLHPVHTTFMNNDLLIRHGLLKGFAGICATQAAELGPRNTAEPLLKVELDSIKQDRFCQLAGFSDYCNYMS
QNRPVSFRAISSDPEVSDALARHYDGPRDVDLHVGLFCEDRVPNSPLPNLILVFVALDAFSQALTNPLLSQHVFKRSTFS
APGWSAIRQTQTLRDVLERNVTGGVGDTFIAMTRKEWVPE
>Mature_519_residues
SRIPYSVQKFQFSIAEAIPPLATLVNRFAINRVVKRARTRPHPLSTERDYVSWSGLTDKRWSARHLPPQTRDNLPEPEVL
QELFRRREGTQRLCPKSTCLFPAFAQYLTDGFIRTESEHLTPEGQDPKLHLKRNTSNHDIDMCTLYGRTPAQTDALRLKS
SDPGLKGRLKSQMIGDEEYPPFLYRDGAPDPDFAVLDPPLGGADQSPEKQAKLFAVGGDRVNSVPQVAMLNTLFLREHNR
LAGEIEAAHPDWDDDRVFETARNTVIVIFIKIIVEDYINHISPLPFTLRADPSVAWNAPWNKPNWITTEFSLLYRWHALI
PDKIRWGDDLHPVHTTFMNNDLLIRHGLLKGFAGICATQAAELGPRNTAEPLLKVELDSIKQDRFCQLAGFSDYCNYMSQ
NRPVSFRAISSDPEVSDALARHYDGPRDVDLHVGLFCEDRVPNSPLPNLILVFVALDAFSQALTNPLLSQHVFKRSTFSA
PGWSAIRQTQTLRDVLERNVTGGVGDTFIAMTRKEWVPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4506265, Length=497, Percent_Identity=28.3702213279678, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI18104967, Length=499, Percent_Identity=26.8537074148297, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI18104969, Length=496, Percent_Identity=25.8064516129032, Blast_Score=143, Evalue=3e-34,
Organism=Homo sapiens, GI126517478, Length=351, Percent_Identity=25.9259259259259, Blast_Score=76, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58923; Mature: 58792

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: PS50292 PEROXIDASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRIPYSVQKFQFSIAEAIPPLATLVNRFAINRVVKRARTRPHPLSTERDYVSWSGLTDK
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCC
RWSARHLPPQTRDNLPEPEVLQELFRRREGTQRLCPKSTCLFPAFAQYLTDGFIRTESEH
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHCCCEECCCCC
LTPEGQDPKLHLKRNTSNHDIDMCTLYGRTPAQTDALRLKSSDPGLKGRLKSQMIGDEEY
CCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCC
PPFLYRDGAPDPDFAVLDPPLGGADQSPEKQAKLFAVGGDRVNSVPQVAMLNTLFLREHN
CCEEEECCCCCCCCEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCC
RLAGEIEAAHPDWDDDRVFETARNTVIVIFIKIIVEDYINHISPLPFTLRADPSVAWNAP
CCCCEEECCCCCCCHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCCCEEEECCCCEEECCC
WNKPNWITTEFSLLYRWHALIPDKIRWGDDLHPVHTTFMNNDLLIRHGLLKGFAGICATQ
CCCCCEEEHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHH
AAELGPRNTAEPLLKVELDSIKQDRFCQLAGFSDYCNYMSQNRPVSFRAISSDPEVSDAL
HHHCCCCCCCCHHHEEEHHHCCCCCCEECCCCHHHHHHHHCCCCEEEEEECCCCCHHHHH
ARHYDGPRDVDLHVGLFCEDRVPNSPLPNLILVFVALDAFSQALTNPLLSQHVFKRSTFS
HHHCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
APGWSAIRQTQTLRDVLERNVTGGVGDTFIAMTRKEWVPE
CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHEEHHHHCCCC
>Mature Secondary Structure 
SRIPYSVQKFQFSIAEAIPPLATLVNRFAINRVVKRARTRPHPLSTERDYVSWSGLTDK
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCC
RWSARHLPPQTRDNLPEPEVLQELFRRREGTQRLCPKSTCLFPAFAQYLTDGFIRTESEH
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHCCCEECCCCC
LTPEGQDPKLHLKRNTSNHDIDMCTLYGRTPAQTDALRLKSSDPGLKGRLKSQMIGDEEY
CCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCC
PPFLYRDGAPDPDFAVLDPPLGGADQSPEKQAKLFAVGGDRVNSVPQVAMLNTLFLREHN
CCEEEECCCCCCCCEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCC
RLAGEIEAAHPDWDDDRVFETARNTVIVIFIKIIVEDYINHISPLPFTLRADPSVAWNAP
CCCCEEECCCCCCCHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCCCEEEECCCCEEECCC
WNKPNWITTEFSLLYRWHALIPDKIRWGDDLHPVHTTFMNNDLLIRHGLLKGFAGICATQ
CCCCCEEEHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHH
AAELGPRNTAEPLLKVELDSIKQDRFCQLAGFSDYCNYMSQNRPVSFRAISSDPEVSDAL
HHHCCCCCCCCHHHEEEHHHCCCCCCEECCCCHHHHHHHHCCCCEEEEEECCCCCHHHHH
ARHYDGPRDVDLHVGLFCEDRVPNSPLPNLILVFVALDAFSQALTNPLLSQHVFKRSTFS
HHHCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
APGWSAIRQTQTLRDVLERNVTGGVGDTFIAMTRKEWVPE
CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHEEHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA